RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 PTTG1O95997 202 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 JUPP14923 745 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 ZNF8P17098 575 aaPredicted RBP10.5□□□□□ -0.73
LINC00661-204ENST00000549354 HOXB9P17482 250 aaPredicted RBP10.5□□□□□ -0.73
LINC00661-204ENST00000549354 ACADLP28330 430 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 CDK6Q00534 326 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 ZNF45Q02386 682 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 SSX1Q16384 188 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 PRSS53Q2L4Q9 553 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 LHFPL3Q86UP9 236 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 ZNF614Q8N883 585 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 OR52E4Q8NGH9 312 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 COQ8BQ96D53 544 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 TM9SF2Q99805 663 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 SLX1AQ9BQ83 275 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 BARHL1Q9BZE3 327 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 RHBGQ9H310 441 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 FBRSQ9HAH7 460 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 SMLR1H3BR10 107 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 SCAMP2O15127 329 aaKnown RBP10.5□□□□□ -0.73
LINC00661-204ENST00000549354 MID1O15344 667 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 CDRT1O95170 752 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 PCDH8O95206 1070 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 CHMP24386 653 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 HTR3AP46098 478 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 CDC42P60953 191 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 ID2Q02363 134 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 CDC20Q12834 499 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 RPA4Q13156 261 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 IFI44LQ53G44 452 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 TMPRSS11AQ6ZMR5 421 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 OXR1Q8N573 874 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 AMER3Q8N944 861 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 OR6F1Q8NGZ6 308 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 ZNF480Q8WV37 535 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 HHIPQ96QV1 700 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 TEX101Q9BY14 249 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 POLR2J2Q9GZM3 115 aaKnown RBP10.5□□□□□ -0.73
LINC00661-204ENST00000549354 TBC1D17Q9HA65 648 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 CUEDC1Q9NWM3 386 aaPredicted RBP10.5□□□□□ -0.73
LINC00661-204ENST00000549354 ITGB1BP2Q9UKP3 347 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 AP3M1Q9Y2T2 418 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 PCYT1BQ9Y5K3 369 aaPredicted RBP10.5□□□□□ -0.73
LINC00661-204ENST00000549354 CLCA3PQ9Y6N3 262 aa10.5□□□□□ -0.73
LINC00661-204ENST00000549354 A0A1W2PRB8 838 aa10.49□□□□□ -0.73
LINC00661-204ENST00000549354 TMCC2O75069 709 aa10.49□□□□□ -0.73
LINC00661-204ENST00000549354 CPNE3O75131 537 aaKnown RBP10.49□□□□□ -0.73
LINC00661-204ENST00000549354 CCNB2O95067 398 aa10.49□□□□□ -0.73
LINC00661-204ENST00000549354 HOXB3P14651 431 aaPredicted RBP10.49□□□□□ -0.73
LINC00661-204ENST00000549354 POU3F3P20264 500 aaPredicted RBP10.49□□□□□ -0.73
LINC00661-204ENST00000549354 IMPA1P29218 277 aa10.49□□□□□ -0.73
LINC00661-204ENST00000549354 TRIM23P36406 574 aa10.49□□□□□ -0.73
LINC00661-204ENST00000549354 SOX9P48436 509 aa10.49□□□□□ -0.73
LINC00661-204ENST00000549354 CLDN2P57739 230 aa10.49□□□□□ -0.73
LINC00661-204ENST00000549354 MICAQ29983 383 aa10.49□□□□□ -0.73
LINC00661-204ENST00000549354 C22orf42Q6IC83 251 aa10.49□□□□□ -0.73
LINC00661-204ENST00000549354 ERICH5Q6P6B1 374 aa10.49□□□□□ -0.73
LINC00661-204ENST00000549354 TDHQ8IZJ6 230 aa10.49□□□□□ -0.73
LINC00661-204ENST00000549354 CADM2Q8N3J6 435 aa10.49□□□□□ -0.73
LINC00661-204ENST00000549354 PLA2G15Q8NCC3 412 aa10.49□□□□□ -0.73
LINC00661-204ENST00000549354 EFHD2Q96C19 240 aaPredicted RBP10.49□□□□□ -0.73
LINC00661-204ENST00000549354 WDR34Q96EX3 536 aa10.49□□□□□ -0.73
LINC00661-204ENST00000549354 SIGLEC11Q96RL6 698 aa10.49□□□□□ -0.73
LINC00661-204ENST00000549354 SLC6A16Q9GZN6 736 aa10.49□□□□□ -0.73
LINC00661-204ENST00000549354 IMP3Q9NV31 184 aaKnown RBP10.49□□□□□ -0.73
LINC00661-204ENST00000549354 NTNG1Q9Y2I2 539 aa10.49□□□□□ -0.73
LINC00661-204ENST00000549354 GPR89AB7ZAQ6 455 aa10.49□□□□□ -0.73
LINC00661-204ENST00000549354 SLC28A2O43868 658 aa10.49□□□□□ -0.73
LINC00661-204ENST00000549354 GPR89BP0CG08 455 aa10.49□□□□□ -0.73
LINC00661-204ENST00000549354 IDSP22304 550 aa10.49□□□□□ -0.73
LINC00661-204ENST00000549354 KRT33BQ14525 404 aa10.49□□□□□ -0.73
LINC00661-204ENST00000549354 WSCD2Q2TBF2 565 aa10.49□□□□□ -0.73
LINC00661-204ENST00000549354 LYPD8Q6UX82 237 aa10.49□□□□□ -0.73
LINC00661-204ENST00000549354 LRRC56Q8IYG6 542 aaPredicted RBP10.49□□□□□ -0.73
LINC00661-204ENST00000549354 SMRP1Q8NCR6 262 aa10.49□□□□□ -0.73
LINC00661-204ENST00000549354 WDR20Q8TBZ3 569 aa10.49□□□□□ -0.73
LINC00661-204ENST00000549354 DIRAS2Q96HU8 199 aa10.49□□□□□ -0.73
LINC00661-204ENST00000549354 METTL2AQ96IZ6 378 aaKnown RBP10.49□□□□□ -0.73
LINC00661-204ENST00000549354 FCRL4Q96PJ5 515 aa10.49□□□□□ -0.73
LINC00661-204ENST00000549354 PITX2Q99697 317 aa10.49□□□□□ -0.73
LINC00661-204ENST00000549354 BEX1Q9HBH7 125 aa10.49□□□□□ -0.73
LINC00661-204ENST00000549354 SMURF1Q9HCE7 757 aa10.49□□□□□ -0.73
LINC00661-204ENST00000549354 FBXW2Q9UKT8 454 aa10.49□□□□□ -0.73
LINC00661-204ENST00000549354 TICRRQ7Z2Z1 1910 aa10.49□□□□□ -0.73
LINC00661-204ENST00000549354 IGLON5A6NGN9 336 aa10.48□□□□□ -0.73
LINC00661-204ENST00000549354 H0YIV9 168 aa10.48□□□□□ -0.73
LINC00661-204ENST00000549354 GNB5O14775 395 aa10.48□□□□□ -0.73
LINC00661-204ENST00000549354 POP7O75817 140 aaKnown RBP10.48□□□□□ -0.73
LINC00661-204ENST00000549354 RAE1P78406 368 aaKnown RBP10.48□□□□□ -0.73
LINC00661-204ENST00000549354 RUNX1T1Q06455 604 aa10.48□□□□□ -0.73
LINC00661-204ENST00000549354 ZNF776Q68DI1 518 aaPredicted RBP10.48□□□□□ -0.73
LINC00661-204ENST00000549354 UNC5DQ6UXZ4 953 aa10.48□□□□□ -0.73
LINC00661-204ENST00000549354 LACC1Q8IV20 430 aa10.48□□□□□ -0.73
LINC00661-204ENST00000549354 SHISA5Q8N114 240 aa10.48□□□□□ -0.73
LINC00661-204ENST00000549354 TP53I13Q8NBR0 393 aaPredicted RBP10.48□□□□□ -0.73
LINC00661-204ENST00000549354 LILRB4Q8NHJ6 448 aa10.48□□□□□ -0.73
LINC00661-204ENST00000549354 FCGR1BQ92637 280 aa10.48□□□□□ -0.73
LINC00661-204ENST00000549354 OR2A14Q96R47 310 aa10.48□□□□□ -0.73
LINC00661-204ENST00000549354 EPYCQ99645 322 aa10.48□□□□□ -0.73
LINC00661-204ENST00000549354 BCL7BQ9BQE9 202 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms