RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 CAPN14A8MX76 684 aa10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 K7EPI3 171 aa10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 FAM58BPP0C7Q3 252 aa10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 TMIGD3P0DMS9 266 aaPredicted RBP10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 KRT15P19012 456 aa10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 NT5EP21589 574 aa10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 HOXC12P31275 282 aa10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 SOX18P35713 384 aa10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 GP5P40197 560 aa10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 CASP3P42574 277 aa10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 SLCO1A2P46721 670 aa10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 NEK2P51955 445 aa10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 NAGLUP54802 743 aa10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 GPX6P59796 221 aa10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 RAB10P61026 200 aa10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 NKX6-1P78426 367 aaPredicted RBP10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 PCDH1Q08174 1060 aa10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 SLMAPQ14BN4 828 aa10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 SETDB1Q15047 1291 aa10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 PCBP2Q15366 365 aaKnown RBP eCLIP10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 TRADDQ15628 312 aa10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 CPSF6Q16630 551 aaKnown RBP eCLIP10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 FBXL19-AS1Q494R0 122 aa10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 CDKL4Q5MAI5 379 aa10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 FNDC7Q5VTL7 733 aa10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 GRHL2Q6ISB3 625 aa10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 SYT10Q6XYQ8 523 aa10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 CYS1Q717R9 158 aa10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 ISCA2Q86U28 154 aa10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 CCDC25Q86WR0 208 aa10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 DND1Q8IYX4 353 aaKnown RBP10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 C7orf57Q8NEG2 295 aa10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 SLC44A1Q8WWI5 657 aa10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 INTS12Q96CB8 462 aaKnown RBP10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 NXNL1Q96CM4 212 aa10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 GPR22Q99680 433 aa10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 RBM24Q9BX46 236 aaKnown RBP10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 ANGPTL4Q9BY76 406 aa10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 PRDM14Q9GZV8 571 aa10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 UTP11Q9Y3A2 253 aaKnown RBP10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 ASB4Q9Y574 426 aa10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 MAP1AP78559 2803 aaPredicted RBP10.92□□□□□ -0.66
TRAFD1-205ENST00000548277 HRNRQ86YZ3 2850 aaPredicted RBP10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 A0A1W2PPR1 153 aa10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 OR6C76A6NM76 312 aa10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 SMAD7O15105 426 aaKnown RBP10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 SNX4O95219 450 aa10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 AIFM1O95831 613 aa10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 HPNP05981 417 aa10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 GSTA2P09210 222 aa10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 NR2F6P10588 404 aa10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 CD53P19397 219 aa10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 TCEA1P23193 301 aaKnown RBP10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 PTX3P26022 381 aaPredicted RBP10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 PIK3R1P27986 724 aa10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 SPRP35270 261 aaPredicted RBP10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 OPRM1P35372 400 aa10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 BSGP35613 385 aa10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 ARL1P40616 181 aaPredicted RBP10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 MAGEA4P43358 317 aa10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 CPA2P48052 419 aa10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 STARP49675 285 aa10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 NRG3P56975 720 aa10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 ETF1P62495 437 aaKnown RBP10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 RCAN2Q14206 197 aa10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 RPS6KA2Q15349 733 aa10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 SF3B4Q15427 424 aaKnown RBP eCLIP10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 SPRED3Q2MJR0 410 aa10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 KBTBD12Q3ZCT8 623 aa10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 TBCELQ5QJ74 424 aa10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 GRTP1Q5TC63 336 aa10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 ANGPTL8Q6UXH0 198 aa10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 ZCCHC7Q8N3Z6 543 aaKnown RBP10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 PPM1NQ8N819 430 aa10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 FAM83FQ8NEG4 500 aaPredicted RBP10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 OR1J4Q8NGS1 313 aa10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 FBXO25Q8TCJ0 367 aa10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 MRRFQ96E11 262 aaKnown RBP10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 UBXN10Q96LJ8 280 aa10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 PELOQ9BRX2 385 aaKnown RBP10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 OR10A5Q9H207 317 aa10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 UBQLN3Q9H347 655 aa10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 METTL7AQ9H8H3 244 aa10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 ACTR8Q9H981 624 aa10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 WDR41Q9HAD4 459 aa10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 NMRAL1Q9HBL8 299 aa10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 SNX15Q9NRS6 342 aa10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 LYARQ9NX58 379 aaKnown RBP10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 NUDT4Q9NZJ9 180 aa10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 MAPRE3Q9UPY8 281 aa10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 C15orf41Q9Y2V0 281 aa10.91□□□□□ -0.66
TRAFD1-205ENST00000548277 A0A0A6YYD5 115 aa10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 ANKRD33BA6NCL7 494 aa10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 MBD3L4A6NDZ8 208 aaPredicted RBP10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 MBD3L3A6NE82 208 aaPredicted RBP10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 MBD3L5A6NJ08 208 aaPredicted RBP10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 CD8B2A6NJW9 211 aa10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 CASKO14936 926 aa10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 ERN1O75460 977 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms