RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 C20orf27Q9GZN8 174 aa17.33■□□□□ 0.36
PRPF40B-206ENST00000547764 SLC35C2Q9NQQ7 365 aa17.33■□□□□ 0.36
PRPF40B-206ENST00000547764 EXO1Q9UQ84 846 aaKnown RBP17.33■□□□□ 0.36
PRPF40B-206ENST00000547764 ASPDHA6ND91 283 aa17.32■□□□□ 0.36
PRPF40B-206ENST00000547764 SKAP2O75563 359 aaPredicted RBP17.32■□□□□ 0.36
PRPF40B-206ENST00000547764 ZIC2O95409 532 aaPredicted RBP17.32■□□□□ 0.36
PRPF40B-206ENST00000547764 NADKO95544 446 aaPredicted RBP17.32■□□□□ 0.36
PRPF40B-206ENST00000547764 EDN3P14138 238 aa17.32■□□□□ 0.36
PRPF40B-206ENST00000547764 GRK2P25098 689 aa17.32■□□□□ 0.36
PRPF40B-206ENST00000547764 MST1P26927 711 aa17.32■□□□□ 0.36
PRPF40B-206ENST00000547764 RPL38P63173 70 aaKnown RBP17.32■□□□□ 0.36
PRPF40B-206ENST00000547764 CEBPEQ15744 281 aa17.32■□□□□ 0.36
PRPF40B-206ENST00000547764 EIF2S3LQ2VIR3 472 aaKnown RBP17.32■□□□□ 0.36
PRPF40B-206ENST00000547764 GALNTL6Q49A17 601 aa17.32■□□□□ 0.36
PRPF40B-206ENST00000547764 XKR7Q5GH72 579 aa17.32■□□□□ 0.36
PRPF40B-206ENST00000547764 OPN5Q6U736 354 aa17.32■□□□□ 0.36
PRPF40B-206ENST00000547764 IKBIPQ70UQ0 350 aa17.32■□□□□ 0.36
PRPF40B-206ENST00000547764 TICAM1Q8IUC6 712 aa17.32■□□□□ 0.36
PRPF40B-206ENST00000547764 ZNF441Q8N8Z8 693 aa17.32■□□□□ 0.36
PRPF40B-206ENST00000547764 CTHRC1Q96CG8 243 aa17.32■□□□□ 0.36
PRPF40B-206ENST00000547764 C3orf30Q96M34 536 aa17.32■□□□□ 0.36
PRPF40B-206ENST00000547764 FRMD6Q96NE9 622 aa17.32■□□□□ 0.36
PRPF40B-206ENST00000547764 TIMMDC1Q9NPL8 285 aa17.32■□□□□ 0.36
PRPF40B-206ENST00000547764 MIEF1Q9NQG6 463 aa17.32■□□□□ 0.36
PRPF40B-206ENST00000547764 GIMAP4Q9NUV9 329 aa17.32■□□□□ 0.36
PRPF40B-206ENST00000547764 GIMAP2Q9UG22 337 aa17.32■□□□□ 0.36
PRPF40B-206ENST00000547764 ZNF639Q9UID6 485 aa17.32■□□□□ 0.36
PRPF40B-206ENST00000547764 ENTPD4Q9Y227 616 aa17.32■□□□□ 0.36
PRPF40B-206ENST00000547764 KLF13Q9Y2Y9 288 aaPredicted RBP17.32■□□□□ 0.36
PRPF40B-206ENST00000547764 TMED5Q9Y3A6 229 aa17.32■□□□□ 0.36
PRPF40B-206ENST00000547764 C2orf92A0A1B0GVN3 265 aa17.31■□□□□ 0.36
PRPF40B-206ENST00000547764 PCSK2P16519 638 aa17.31■□□□□ 0.36
PRPF40B-206ENST00000547764 SDC1P18827 310 aa17.31■□□□□ 0.36
PRPF40B-206ENST00000547764 SLC1A6P48664 564 aa17.31■□□□□ 0.36
PRPF40B-206ENST00000547764 TDGF1P3P51864 188 aa17.31■□□□□ 0.36
PRPF40B-206ENST00000547764 SLC18A1P54219 525 aa17.31■□□□□ 0.36
PRPF40B-206ENST00000547764 MRPS35P82673 323 aaKnown RBP17.31■□□□□ 0.36
PRPF40B-206ENST00000547764 EXOSC7Q15024 291 aaKnown RBP17.31■□□□□ 0.36
PRPF40B-206ENST00000547764 TRMT12Q53H54 448 aaKnown RBP17.31■□□□□ 0.36
PRPF40B-206ENST00000547764 LYPD8Q6UX82 237 aa17.31■□□□□ 0.36
PRPF40B-206ENST00000547764 SULF2Q8IWU5 870 aa17.31■□□□□ 0.36
PRPF40B-206ENST00000547764 SLC15A4Q8N697 577 aa17.31■□□□□ 0.36
PRPF40B-206ENST00000547764 ZNF781Q8N8C0 355 aa17.31■□□□□ 0.36
PRPF40B-206ENST00000547764 FAM98AQ8NCA5 519 aaKnown RBP17.31■□□□□ 0.36
PRPF40B-206ENST00000547764 PSD4Q8NDX1 1056 aa17.31■□□□□ 0.36
PRPF40B-206ENST00000547764 SIMC1Q8NDZ2 872 aa17.31■□□□□ 0.36
PRPF40B-206ENST00000547764 C16orf52Q8NHV5 167 aa17.31■□□□□ 0.36
PRPF40B-206ENST00000547764 SLC22A8Q8TCC7 542 aa17.31■□□□□ 0.36
PRPF40B-206ENST00000547764 MGARPQ8TDB4 240 aa17.31■□□□□ 0.36
PRPF40B-206ENST00000547764 PPP3R2Q96LZ3 170 aa17.31■□□□□ 0.36
PRPF40B-206ENST00000547764 SORT1Q99523 831 aa17.31■□□□□ 0.36
PRPF40B-206ENST00000547764 CCT7Q99832 543 aa17.31■□□□□ 0.36
PRPF40B-206ENST00000547764 TAS2R7Q9NYW3 318 aa17.31■□□□□ 0.36
PRPF40B-206ENST00000547764 BCAP29Q9UHQ4 241 aa17.31■□□□□ 0.36
PRPF40B-206ENST00000547764 RAP2CQ9Y3L5 183 aa17.31■□□□□ 0.36
PRPF40B-206ENST00000547764 FLNCQ14315 2725 aa17.31■□□□□ 0.36
PRPF40B-206ENST00000547764 ATP6AP2A0A1C7CYW4 349 aa17.3■□□□□ 0.36
PRPF40B-206ENST00000547764 MYO1GB0I1T2 1018 aa17.3■□□□□ 0.36
PRPF40B-206ENST00000547764 PEX1O43933 1283 aa17.3■□□□□ 0.36
PRPF40B-206ENST00000547764 PEX11AO75192 247 aa17.3■□□□□ 0.36
PRPF40B-206ENST00000547764 ATP6AP2O75787 350 aa17.3■□□□□ 0.36
PRPF40B-206ENST00000547764 WISP2O76076 250 aa17.3■□□□□ 0.36
PRPF40B-206ENST00000547764 CBX7O95931 251 aa17.3■□□□□ 0.36
PRPF40B-206ENST00000547764 NR0B1P51843 470 aaKnown RBP17.3■□□□□ 0.36
PRPF40B-206ENST00000547764 SRSF1Q07955 248 aaKnown RBP eCLIP17.3■□□□□ 0.36
PRPF40B-206ENST00000547764 DUSP8Q13202 625 aa17.3■□□□□ 0.36
PRPF40B-206ENST00000547764 STX3Q13277 289 aa17.3■□□□□ 0.36
PRPF40B-206ENST00000547764 ELOAQ14241 798 aaKnown RBP17.3■□□□□ 0.36
PRPF40B-206ENST00000547764 ZNF791Q3KP31 576 aaPredicted RBP17.3■□□□□ 0.36
PRPF40B-206ENST00000547764 ZNF628Q5EBL2 1059 aa17.3■□□□□ 0.36
PRPF40B-206ENST00000547764 AGBL2Q5U5Z8 902 aa17.3■□□□□ 0.36
PRPF40B-206ENST00000547764 HLA-DQA1Q5Y7H0 255 aa17.3■□□□□ 0.36
PRPF40B-206ENST00000547764 RTL4Q6ZR62 310 aa17.3■□□□□ 0.36
PRPF40B-206ENST00000547764 CPSF7Q8N684 471 aaKnown RBP17.3■□□□□ 0.36
PRPF40B-206ENST00000547764 OR9A2Q8NGT5 310 aa17.3■□□□□ 0.36
PRPF40B-206ENST00000547764 PRR7Q8TB68 274 aa17.3■□□□□ 0.36
PRPF40B-206ENST00000547764 ZNF675Q8TD23 568 aa17.3■□□□□ 0.36
PRPF40B-206ENST00000547764 GFM2Q969S9 779 aaKnown RBP17.3■□□□□ 0.36
PRPF40B-206ENST00000547764 ADIPOR1Q96A54 375 aa17.3■□□□□ 0.36
PRPF40B-206ENST00000547764 TP53INP1Q96A56 240 aa17.3■□□□□ 0.36
PRPF40B-206ENST00000547764 ARL8AQ96BM9 186 aa17.3■□□□□ 0.36
PRPF40B-206ENST00000547764 SGCZQ96LD1 299 aa17.3■□□□□ 0.36
PRPF40B-206ENST00000547764 TSSK3Q96PN8 268 aa17.3■□□□□ 0.36
PRPF40B-206ENST00000547764 BBS4Q96RK4 519 aa17.3■□□□□ 0.36
PRPF40B-206ENST00000547764 BAIAP2L1Q9UHR4 511 aa17.3■□□□□ 0.36
PRPF40B-206ENST00000547764 DTX4Q9Y2E6 619 aa17.3■□□□□ 0.36
PRPF40B-206ENST00000547764 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.3■□□□□ 0.36
PRPF40B-206ENST00000547764 KLRC4-KLRK1H3BQV0 150 aa17.29■□□□□ 0.36
PRPF40B-206ENST00000547764 SNUPNO95149 360 aaKnown RBP17.29■□□□□ 0.36
PRPF40B-206ENST00000547764 JUNP05412 331 aaKnown RBP17.29■□□□□ 0.36
PRPF40B-206ENST00000547764 BCKDHAP12694 445 aa17.29■□□□□ 0.36
PRPF40B-206ENST00000547764 H2AFXP16104 143 aaPredicted RBP17.29■□□□□ 0.36
PRPF40B-206ENST00000547764 GPX3P22352 226 aa17.29■□□□□ 0.36
PRPF40B-206ENST00000547764 MPIP34949 423 aa17.29■□□□□ 0.36
PRPF40B-206ENST00000547764 MEOX1P50221 254 aa17.29■□□□□ 0.36
PRPF40B-206ENST00000547764 GPR85P60893 370 aa17.29■□□□□ 0.36
PRPF40B-206ENST00000547764 ALDH6A1Q02252 535 aaKnown RBP17.29■□□□□ 0.36
PRPF40B-206ENST00000547764 BST1Q10588 318 aa17.29■□□□□ 0.36
PRPF40B-206ENST00000547764 ATP6AP1LQ52LC2 224 aa17.29■□□□□ 0.36
PRPF40B-206ENST00000547764 FAM9CQ8IZT9 166 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms