RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 GGT5P36269 586 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 ERVK-8P63133 956 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 TGFBR3Q03167 851 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 HYAL1Q12794 435 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 SELENBP1Q13228 472 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 KCNC3Q14003 757 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 MLC1Q15049 377 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 CLVS2Q5SYC1 327 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 SHISA6Q6ZSJ9 500 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 BMP8AQ7Z5Y6 402 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 GALNT5Q7Z7M9 940 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 CNEP1R1Q8N9A8 125 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 MINDY2Q8NBR6 621 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 ACVR1CQ8NER5 493 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 RAB2BQ8WUD1 216 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 CHFRQ96EP1 664 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 CNDP2Q96KP4 475 aaKnown RBP8.2□□□□□ -1.1
CLIP1-218ENST00000545889 ASB16Q96NS5 453 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 PKP4Q99569 1192 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 THSD1Q9NS62 852 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 TVP23BQ9NYZ1 205 aa8.2□□□□□ -1.1
CLIP1-218ENST00000545889 EFCAB7A8K855 629 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 CLIC1O00299 241 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 OR1I1O60431 355 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 TACSTD2P09758 323 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 PRKCAP17252 672 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 CHRNB4P30926 498 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 HOXA9P31269 272 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 GGT2P36268 569 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 HERVK_113P63132 956 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 OR4F3Q6IEY1 312 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 SYCE2Q6PIF2 218 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 Q7L0L9 218 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 ZNF550Q7Z398 422 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 FAM86B1Q8N7N1 296 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 KBTBD8Q8NFY9 601 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 PJA1Q8NG27 643 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 OR2L3Q8NG85 312 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 MCFD2Q8NI22 146 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 CPNE2Q96FN4 548 aaPredicted RBP8.19□□□□□ -1.1
CLIP1-218ENST00000545889 SCRN2Q96FV2 425 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 ERVK-6Q9BXR3 956 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 KLHL31Q9H511 634 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 ARMC1Q9NVT9 282 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 CCDC59Q9P031 241 aaKnown RBP8.19□□□□□ -1.1
CLIP1-218ENST00000545889 PADI1Q9ULC6 663 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 PRPF19Q9UMS4 504 aaKnown RBP8.19□□□□□ -1.1
CLIP1-218ENST00000545889 WASF3Q9UPY6 502 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 NUPL2O15504 423 aaKnown RBP8.19□□□□□ -1.1
CLIP1-218ENST00000545889 S1PR4O95977 384 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 TP53P04637 393 aaPredicted RBP8.19□□□□□ -1.1
CLIP1-218ENST00000545889 GLULP15104 373 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 PGCP20142 388 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 IGFBP5P24593 272 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 TGFBR2P37173 567 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 CLRN1P58418 232 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 CD83Q01151 205 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 DUOXA1Q1HG43 343 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 C10orf62Q5T681 223 aaPredicted RBP8.19□□□□□ -1.1
CLIP1-218ENST00000545889 ARRDC2Q8TBH0 407 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 AP3S1Q92572 193 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 NINJ1Q92982 152 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 DHRS9Q9BPW9 319 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 MGME1Q9BQP7 344 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 PCDHAC1Q9H158 963 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 SAV1Q9H4B6 383 aaPredicted RBP8.19□□□□□ -1.1
CLIP1-218ENST00000545889 CDH20Q9HBT6 801 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 TMEM9BQ9NQ34 198 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 SHROOM3Q8TF72 1996 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 ISPDA4D126 451 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 E7ESA3 106 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 TYROBPO43914 113 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 NPHS1O60500 1241 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 CBLP22681 906 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 ITGB7P26010 798 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 AK4P27144 223 aaPredicted RBP8.19□□□□□ -1.1
CLIP1-218ENST00000545889 RPL35P42766 123 aaKnown RBP8.19□□□□□ -1.1
CLIP1-218ENST00000545889 ABHD18Q0P651 414 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 SLAMF1Q13291 335 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 HSF5Q4G112 596 aaPredicted RBP8.19□□□□□ -1.1
CLIP1-218ENST00000545889 CLEC12AQ5QGZ9 265 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 MANEALQ5VSG8 457 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 ZC3HC1Q86WB0 502 aaKnown RBP8.19□□□□□ -1.1
CLIP1-218ENST00000545889 ZNF101Q8IZC7 436 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 ZNF283Q8N7M2 679 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 BANPQ8N9N5 519 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 ABHD11Q8NFV4 315 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 DNAJB8Q8NHS0 232 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 TRMT10AQ8TBZ6 339 aaKnown RBP8.19□□□□□ -1.1
CLIP1-218ENST00000545889 FER1L6-AS2Q96M78 137 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 RBM38Q9H0Z9 239 aaKnown RBP8.19□□□□□ -1.1
CLIP1-218ENST00000545889 PIGUQ9H490 435 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 PCDHB16Q9NRJ7 776 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 AGPAT4Q9NRZ5 378 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 NLE1Q9NVX2 485 aaPredicted RBP8.19□□□□□ -1.1
CLIP1-218ENST00000545889 SVILO95425 2214 aa8.19□□□□□ -1.1
CLIP1-218ENST00000545889 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.18□□□□□ -1.1
CLIP1-218ENST00000545889 DAPL1A0PJW8 107 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 OR52A4PA6NMU1 304 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 C11orf98E9PRG8 122 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms