RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 TMED10P49755 219 aaKnown RBP13.37□□□□□ -0.27
RTN3-214ENST00000545432 RPP38P78345 283 aaKnown RBP13.37□□□□□ -0.27
RTN3-214ENST00000545432 TNFRSF17Q02223 184 aa13.37□□□□□ -0.27
RTN3-214ENST00000545432 SLAMF1Q13291 335 aa13.37□□□□□ -0.27
RTN3-214ENST00000545432 PAGE2BQ5JRK9 111 aa13.37□□□□□ -0.27
RTN3-214ENST00000545432 KHDRBS2Q5VWX1 349 aaKnown RBP13.37□□□□□ -0.27
RTN3-214ENST00000545432 PODNL1Q6PEZ8 512 aa13.37□□□□□ -0.27
RTN3-214ENST00000545432 TRMT10BQ6PF06 316 aaKnown RBP13.37□□□□□ -0.27
RTN3-214ENST00000545432 ZNF474Q6S9Z5 364 aaPredicted RBP13.37□□□□□ -0.27
RTN3-214ENST00000545432 GPR180Q86V85 440 aa13.37□□□□□ -0.27
RTN3-214ENST00000545432 ZC3HC1Q86WB0 502 aaKnown RBP13.37□□□□□ -0.27
RTN3-214ENST00000545432 MEIOBQ8N635 442 aa13.37□□□□□ -0.27
RTN3-214ENST00000545432 MAGOHBQ96A72 148 aaKnown RBP13.37□□□□□ -0.27
RTN3-214ENST00000545432 HS3ST6Q96QI5 342 aa13.37□□□□□ -0.27
RTN3-214ENST00000545432 PHACTR1Q9C0D0 580 aa13.37□□□□□ -0.27
RTN3-214ENST00000545432 POPDC3Q9HBV1 291 aa13.37□□□□□ -0.27
RTN3-214ENST00000545432 PTBP2Q9UKA9 531 aaKnown RBP13.37□□□□□ -0.27
RTN3-214ENST00000545432 TSC22D4Q9Y3Q8 395 aa13.37□□□□□ -0.27
RTN3-214ENST00000545432 WASHC1A8K0Z3 465 aa13.36□□□□□ -0.27
RTN3-214ENST00000545432 SNPHO15079 494 aa13.36□□□□□ -0.27
RTN3-214ENST00000545432 F12P00748 615 aaPredicted RBP13.36□□□□□ -0.27
RTN3-214ENST00000545432 SERPINB1P30740 379 aa13.36□□□□□ -0.27
RTN3-214ENST00000545432 MASP1P48740 699 aa13.36□□□□□ -0.27
RTN3-214ENST00000545432 HNRNPH2P55795 449 aaKnown RBP13.36□□□□□ -0.27
RTN3-214ENST00000545432 SNTA1Q13424 505 aa13.36□□□□□ -0.27
RTN3-214ENST00000545432 HIST2H2ACQ16777 129 aaPredicted RBP13.36□□□□□ -0.27
RTN3-214ENST00000545432 STEAP4Q687X5 459 aa13.36□□□□□ -0.27
RTN3-214ENST00000545432 C18orf63Q68DL7 685 aa13.36□□□□□ -0.27
RTN3-214ENST00000545432 HIST2H2AA3Q6FI13 130 aa13.36□□□□□ -0.27
RTN3-214ENST00000545432 SULT1C3Q6IMI6 304 aa13.36□□□□□ -0.27
RTN3-214ENST00000545432 SLC30A6Q6NXT4 461 aa13.36□□□□□ -0.27
RTN3-214ENST00000545432 ENPP6Q6UWR7 440 aa13.36□□□□□ -0.27
RTN3-214ENST00000545432 YRDCQ86U90 279 aaKnown RBP13.36□□□□□ -0.27
RTN3-214ENST00000545432 HIPK1Q86Z02 1210 aa13.36□□□□□ -0.27
RTN3-214ENST00000545432 OR1J4Q8NGS1 313 aa13.36□□□□□ -0.27
RTN3-214ENST00000545432 DOK4Q8TEW6 326 aa13.36□□□□□ -0.27
RTN3-214ENST00000545432 RIT1Q92963 219 aa13.36□□□□□ -0.27
RTN3-214ENST00000545432 HGDQ93099 445 aa13.36□□□□□ -0.27
RTN3-214ENST00000545432 UCN3Q969E3 161 aa13.36□□□□□ -0.27
RTN3-214ENST00000545432 UBE2E3Q969T4 207 aa13.36□□□□□ -0.27
RTN3-214ENST00000545432 PIK3IP1Q96FE7 263 aa13.36□□□□□ -0.27
RTN3-214ENST00000545432 CMTM7Q96FZ5 175 aa13.36□□□□□ -0.27
RTN3-214ENST00000545432 ZNF717Q9BY31 904 aaPredicted RBP13.36□□□□□ -0.27
RTN3-214ENST00000545432 DERL2Q9GZP9 239 aa13.36□□□□□ -0.27
RTN3-214ENST00000545432 CNOT10Q9H9A5 744 aaKnown RBP13.36□□□□□ -0.27
RTN3-214ENST00000545432 UBTD1Q9HAC8 227 aa13.36□□□□□ -0.27
RTN3-214ENST00000545432 CXorf21Q9HAI6 301 aa13.36□□□□□ -0.27
RTN3-214ENST00000545432 ELOVL5Q9NYP7 299 aa13.36□□□□□ -0.27
RTN3-214ENST00000545432 RNF112Q9ULX5 631 aa13.36□□□□□ -0.27
RTN3-214ENST00000545432 EXO1Q9UQ84 846 aaKnown RBP13.36□□□□□ -0.27
RTN3-214ENST00000545432 MRPS18CQ9Y3D5 142 aaKnown RBP13.36□□□□□ -0.27
RTN3-214ENST00000545432 ASB4Q9Y574 426 aa13.36□□□□□ -0.27
RTN3-214ENST00000545432 BANF1O75531 89 aa13.35□□□□□ -0.27
RTN3-214ENST00000545432 CBR3O75828 277 aa13.35□□□□□ -0.27
RTN3-214ENST00000545432 TGFB1P01137 390 aa13.35□□□□□ -0.27
RTN3-214ENST00000545432 CGAP01215 116 aa13.35□□□□□ -0.27
RTN3-214ENST00000545432 C8BP07358 591 aa13.35□□□□□ -0.27
RTN3-214ENST00000545432 S1PR1P21453 382 aa13.35□□□□□ -0.27
RTN3-214ENST00000545432 CCKARP32238 428 aa13.35□□□□□ -0.27
RTN3-214ENST00000545432 CXCR5P32302 372 aa13.35□□□□□ -0.27
RTN3-214ENST00000545432 UGT2B10P36537 528 aa13.35□□□□□ -0.27
RTN3-214ENST00000545432 GMPRP36959 345 aa13.35□□□□□ -0.27
RTN3-214ENST00000545432 SSR2P43308 183 aa13.35□□□□□ -0.27
RTN3-214ENST00000545432 LHX2P50458 406 aa13.35□□□□□ -0.27
RTN3-214ENST00000545432 TNK1Q13470 666 aa13.35□□□□□ -0.27
RTN3-214ENST00000545432 ZNF460Q14592 562 aa13.35□□□□□ -0.27
RTN3-214ENST00000545432 PDK4Q16654 411 aa13.35□□□□□ -0.27
RTN3-214ENST00000545432 HMBOX1Q6NT76 420 aa13.35□□□□□ -0.27
RTN3-214ENST00000545432 CCDC137Q6PK04 289 aaKnown RBP13.35□□□□□ -0.27
RTN3-214ENST00000545432 C22orf34Q6ZV56 151 aa13.35□□□□□ -0.27
RTN3-214ENST00000545432 PLEKHM3Q6ZWE6 761 aa13.35□□□□□ -0.27
RTN3-214ENST00000545432 MILR1Q7Z6M3 343 aa13.35□□□□□ -0.27
RTN3-214ENST00000545432 TRIM42Q8IWZ5 723 aa13.35□□□□□ -0.27
RTN3-214ENST00000545432 GCNT2Q8N0V5 402 aa13.35□□□□□ -0.27
RTN3-214ENST00000545432 WDSUB1Q8N9V3 476 aa13.35□□□□□ -0.27
RTN3-214ENST00000545432 OR7G3Q8NG95 312 aa13.35□□□□□ -0.27
RTN3-214ENST00000545432 TMEM158Q8WZ71 300 aa13.35□□□□□ -0.27
RTN3-214ENST00000545432 RBSNQ9H1K0 784 aa13.35□□□□□ -0.27
RTN3-214ENST00000545432 KLHL28Q9NXS3 571 aa13.35□□□□□ -0.27
RTN3-214ENST00000545432 PHF11Q9UIL8 331 aa13.35□□□□□ -0.27
RTN3-214ENST00000545432 DLGAP4Q9Y2H0 992 aa13.35□□□□□ -0.27
RTN3-214ENST00000545432 WIF1Q9Y5W5 379 aa13.35□□□□□ -0.27
RTN3-214ENST00000545432 PSAT1Q9Y617 370 aa13.35□□□□□ -0.27
RTN3-214ENST00000545432 FAM95CA0A1B0GW59 222 aa13.34□□□□□ -0.27
RTN3-214ENST00000545432 PLPP1O14494 284 aa13.34□□□□□ -0.27
RTN3-214ENST00000545432 GNB5O14775 395 aa13.34□□□□□ -0.27
RTN3-214ENST00000545432 ICOSLGO75144 302 aa13.34□□□□□ -0.27
RTN3-214ENST00000545432 AIFM1O95831 613 aa13.34□□□□□ -0.27
RTN3-214ENST00000545432 TGM6O95932 706 aa13.34□□□□□ -0.27
RTN3-214ENST00000545432 ZNF708P17019 499 aa13.34□□□□□ -0.27
RTN3-214ENST00000545432 ABCD3P28288 659 aa13.34□□□□□ -0.27
RTN3-214ENST00000545432 TLX1P31314 330 aaPredicted RBP13.34□□□□□ -0.27
RTN3-214ENST00000545432 SSTR4P31391 388 aa13.34□□□□□ -0.27
RTN3-214ENST00000545432 HSPA7P48741 367 aa13.34□□□□□ -0.27
RTN3-214ENST00000545432 CLDN18P56856 261 aa13.34□□□□□ -0.27
RTN3-214ENST00000545432 IRF8Q02556 426 aa13.34□□□□□ -0.27
RTN3-214ENST00000545432 CHIT1Q13231 466 aa13.34□□□□□ -0.27
RTN3-214ENST00000545432 BCL2A1Q16548 175 aa13.34□□□□□ -0.27
RTN3-214ENST00000545432 PLXDC2Q6UX71 529 aa13.34□□□□□ -0.27
RTN3-214ENST00000545432 SH2D5Q6ZV89 423 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms