RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	EMB	Q6PCB8	327 aa		12.35	□□□□□ -0.43
POLE-222	ENST00000545015	PAOX	Q6QHF9	649 aa		12.35	□□□□□ -0.43
POLE-222	ENST00000545015	FAM47E	Q6ZV65	393 aa		12.35	□□□□□ -0.43
POLE-222	ENST00000545015	MRGPRG	Q86SM5	289 aa		12.35	□□□□□ -0.43
POLE-222	ENST00000545015	TAGAP	Q8N103	731 aa		12.35	□□□□□ -0.43
POLE-222	ENST00000545015	MMP21	Q8N119	569 aa		12.35	□□□□□ -0.43
POLE-222	ENST00000545015	VWA5B2	Q8N398	1253 aa		12.35	□□□□□ -0.43
POLE-222	ENST00000545015	FAM109A	Q8N4B1	249 aa		12.35	□□□□□ -0.43
POLE-222	ENST00000545015	CCNYL1	Q8N7R7	359 aa		12.35	□□□□□ -0.43
POLE-222	ENST00000545015	FAM76A	Q8TAV0	307 aa		12.35	□□□□□ -0.43
POLE-222	ENST00000545015	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	12.35	□□□□□ -0.43
POLE-222	ENST00000545015	ZNF675	Q8TD23	568 aa		12.35	□□□□□ -0.43
POLE-222	ENST00000545015	CAVIN3	Q969G5	261 aa		12.35	□□□□□ -0.43
POLE-222	ENST00000545015	NTNG2	Q96CW9	530 aa		12.35	□□□□□ -0.43
POLE-222	ENST00000545015	CNRIP1	Q96F85	164 aa	Predicted RBP	12.35	□□□□□ -0.43
POLE-222	ENST00000545015	APIP	Q96GX9	242 aa		12.35	□□□□□ -0.43
POLE-222	ENST00000545015	PHF12	Q96QT6	1004 aa		12.35	□□□□□ -0.43
POLE-222	ENST00000545015	KCNA7	Q96RP8	456 aa		12.35	□□□□□ -0.43
POLE-222	ENST00000545015	TRMO	Q9BU70	441 aa		12.35	□□□□□ -0.43
POLE-222	ENST00000545015	ROPN1B	Q9BZX4	212 aa	Predicted RBP	12.35	□□□□□ -0.43
POLE-222	ENST00000545015	ROPN1	Q9HAT0	212 aa	Predicted RBP	12.35	□□□□□ -0.43
POLE-222	ENST00000545015	PROK2	Q9HC23	129 aa		12.35	□□□□□ -0.43
POLE-222	ENST00000545015	MID1IP1	Q9NPA3	183 aa		12.35	□□□□□ -0.43
POLE-222	ENST00000545015	QPCTL	Q9NXS2	382 aa		12.35	□□□□□ -0.43
POLE-222	ENST00000545015	MAT2B	Q9NZL9	334 aa		12.35	□□□□□ -0.43
POLE-222	ENST00000545015	HEY2	Q9UBP5	337 aa		12.35	□□□□□ -0.43
POLE-222	ENST00000545015	LGALS13	Q9UHV8	139 aa		12.35	□□□□□ -0.43
POLE-222	ENST00000545015	CNOT11	Q9UKZ1	510 aa	Known RBP	12.35	□□□□□ -0.43
POLE-222	ENST00000545015	CFL2	Q9Y281	166 aa		12.35	□□□□□ -0.43
POLE-222	ENST00000545015	WBP11	Q9Y2W2	641 aa	Known RBP	12.35	□□□□□ -0.43
POLE-222	ENST00000545015	TIMM22	Q9Y584	194 aa		12.35	□□□□□ -0.43
POLE-222	ENST00000545015	MYO7B	Q6PIF6	2116 aa		12.34	□□□□□ -0.43
POLE-222	ENST00000545015		A0A1B0GTH9	108 aa		12.34	□□□□□ -0.43
POLE-222	ENST00000545015	OR14I1	A6ND48	311 aa		12.34	□□□□□ -0.43
POLE-222	ENST00000545015	CAPN14	A8MX76	684 aa		12.34	□□□□□ -0.43
POLE-222	ENST00000545015	PCDH7	O60245	1069 aa		12.34	□□□□□ -0.43
POLE-222	ENST00000545015	ESRRA	P11474	423 aa	Predicted RBP	12.34	□□□□□ -0.43
POLE-222	ENST00000545015	NAGA	P17050	411 aa		12.34	□□□□□ -0.43
POLE-222	ENST00000545015	NT5E	P21589	574 aa		12.34	□□□□□ -0.43
POLE-222	ENST00000545015	GPX3	P22352	226 aa		12.34	□□□□□ -0.43
POLE-222	ENST00000545015	PRPH2	P23942	346 aa		12.34	□□□□□ -0.43
POLE-222	ENST00000545015	TIA1	P31483	386 aa	Known RBP eCLIP	12.34	□□□□□ -0.43
POLE-222	ENST00000545015	TMED10	P49755	219 aa	Known RBP	12.34	□□□□□ -0.43
POLE-222	ENST00000545015	SMS	P52788	366 aa		12.34	□□□□□ -0.43
POLE-222	ENST00000545015	FOXA1	P55317	472 aa		12.34	□□□□□ -0.43
POLE-222	ENST00000545015	HMGCS1	Q01581	520 aa		12.34	□□□□□ -0.43
POLE-222	ENST00000545015	PLGLB1	Q02325	96 aa		12.34	□□□□□ -0.43
POLE-222	ENST00000545015	HEPACAM	Q14CZ8	416 aa		12.34	□□□□□ -0.43
POLE-222	ENST00000545015	C6orf163	Q5TEZ5	329 aa		12.34	□□□□□ -0.43
POLE-222	ENST00000545015	TMEM81	Q6P7N7	255 aa		12.34	□□□□□ -0.43
POLE-222	ENST00000545015	TRABD2A	Q86V40	505 aa		12.34	□□□□□ -0.43
POLE-222	ENST00000545015	LRRC25	Q8N386	305 aa	Predicted RBP	12.34	□□□□□ -0.43
POLE-222	ENST00000545015	TMEM251	Q8N6I4	163 aa		12.34	□□□□□ -0.43
POLE-222	ENST00000545015	BANP	Q8N9N5	519 aa		12.34	□□□□□ -0.43
POLE-222	ENST00000545015	DOK4	Q8TEW6	326 aa		12.34	□□□□□ -0.43
POLE-222	ENST00000545015	C16orf78	Q8WTQ4	265 aa		12.34	□□□□□ -0.43
POLE-222	ENST00000545015	KLHL29	Q96CT2	875 aa		12.34	□□□□□ -0.43
POLE-222	ENST00000545015	GAL3ST4	Q96RP7	486 aa		12.34	□□□□□ -0.43
POLE-222	ENST00000545015	TMEM109	Q9BVC6	243 aa		12.34	□□□□□ -0.43
POLE-222	ENST00000545015	TUBA8	Q9NY65	449 aa	Predicted RBP	12.34	□□□□□ -0.43
POLE-222	ENST00000545015	TAS2R7	Q9NYW3	318 aa		12.34	□□□□□ -0.43
POLE-222	ENST00000545015	UTS2R	Q9UKP6	389 aa		12.34	□□□□□ -0.43
POLE-222	ENST00000545015	DLGAP4	Q9Y2H0	992 aa		12.34	□□□□□ -0.43
POLE-222	ENST00000545015	PLLP	Q9Y342	182 aa		12.34	□□□□□ -0.43
POLE-222	ENST00000545015	CCL27	Q9Y4X3	112 aa		12.34	□□□□□ -0.43
POLE-222	ENST00000545015	NPFFR2	Q9Y5X5	522 aa		12.34	□□□□□ -0.43
POLE-222	ENST00000545015	NCOA6	Q14686	2063 aa	Predicted RBP	12.33	□□□□□ -0.44
POLE-222	ENST00000545015	SMIM23	A6NLE4	172 aa		12.33	□□□□□ -0.44
POLE-222	ENST00000545015	SUSD5	O60279	629 aa		12.33	□□□□□ -0.44
POLE-222	ENST00000545015	HCN1	O60741	890 aa		12.33	□□□□□ -0.44
POLE-222	ENST00000545015	ERAL1	O75616	437 aa	Known RBP	12.33	□□□□□ -0.44
POLE-222	ENST00000545015	BCAS2	O75934	225 aa	Predicted RBP	12.33	□□□□□ -0.44
POLE-222	ENST00000545015	RSL1D1	O76021	490 aa	Known RBP	12.33	□□□□□ -0.44
POLE-222	ENST00000545015	SLU7	O95391	586 aa	Known RBP	12.33	□□□□□ -0.44
POLE-222	ENST00000545015	CBX7	O95931	251 aa		12.33	□□□□□ -0.44
POLE-222	ENST00000545015	IL3	P08700	152 aa		12.33	□□□□□ -0.44
POLE-222	ENST00000545015	UROS	P10746	265 aa		12.33	□□□□□ -0.44
POLE-222	ENST00000545015	COL8A1	P27658	744 aa		12.33	□□□□□ -0.44
POLE-222	ENST00000545015	FEN1	P39748	380 aa	Known RBP	12.33	□□□□□ -0.44
POLE-222	ENST00000545015	DNASE1L1	P49184	302 aa		12.33	□□□□□ -0.44
POLE-222	ENST00000545015	NR0B1	P51843	470 aa	Known RBP	12.33	□□□□□ -0.44
POLE-222	ENST00000545015	NRG3	P56975	720 aa		12.33	□□□□□ -0.44
POLE-222	ENST00000545015	DCAF7	P61962	342 aa		12.33	□□□□□ -0.44
POLE-222	ENST00000545015	DUSP2	Q05923	314 aa		12.33	□□□□□ -0.44
POLE-222	ENST00000545015	DUSP8	Q13202	625 aa		12.33	□□□□□ -0.44
POLE-222	ENST00000545015	PCLAF	Q15004	111 aa		12.33	□□□□□ -0.44
POLE-222	ENST00000545015	RPS6KA2	Q15349	733 aa		12.33	□□□□□ -0.44
POLE-222	ENST00000545015	CFAP157	Q5JU67	520 aa		12.33	□□□□□ -0.44
POLE-222	ENST00000545015	HLA-DQA1	Q5Y7H0	255 aa		12.33	□□□□□ -0.44
POLE-222	ENST00000545015	FAM111B	Q6SJ93	734 aa		12.33	□□□□□ -0.44
POLE-222	ENST00000545015	TRIL	Q7L0X0	811 aa		12.33	□□□□□ -0.44
POLE-222	ENST00000545015	C4orf33	Q8N1A6	199 aa		12.33	□□□□□ -0.44
POLE-222	ENST00000545015	MREG	Q8N565	214 aa		12.33	□□□□□ -0.44
POLE-222	ENST00000545015	OR10G3	Q8NGC4	313 aa		12.33	□□□□□ -0.44
POLE-222	ENST00000545015	OR2W6P	Q8NHA6	318 aa		12.33	□□□□□ -0.44
POLE-222	ENST00000545015	SREK1	Q8WXA9	508 aa	Known RBP	12.33	□□□□□ -0.44
POLE-222	ENST00000545015	HSPBAP1	Q96EW2	488 aa		12.33	□□□□□ -0.44
POLE-222	ENST00000545015	APOPT1	Q96IL0	206 aa		12.33	□□□□□ -0.44
POLE-222	ENST00000545015	TNFRSF12A	Q9NP84	129 aa		12.33	□□□□□ -0.44
POLE-222	ENST00000545015	ZFP64	Q9NPA5	681 aa		12.33	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms