RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 TGFBR3LH3BV60 316 aa11.6□□□□□ -0.55
ACTN1-206ENST00000544964 CCL21O00585 134 aa11.6□□□□□ -0.55
ACTN1-206ENST00000544964 PGRMC2O15173 223 aa11.6□□□□□ -0.55
ACTN1-206ENST00000544964 PRMT3O60678 531 aa11.6□□□□□ -0.55
ACTN1-206ENST00000544964 SLC19A2O60779 497 aa11.6□□□□□ -0.55
ACTN1-206ENST00000544964 GUCY1B2O75343 617 aa11.6□□□□□ -0.55
ACTN1-206ENST00000544964 BCKDHAP12694 445 aa11.6□□□□□ -0.55
ACTN1-206ENST00000544964 ALOX15P16050 662 aaPredicted RBP11.6□□□□□ -0.55
ACTN1-206ENST00000544964 LBPP18428 481 aa11.6□□□□□ -0.55
ACTN1-206ENST00000544964 SDC1P18827 310 aa11.6□□□□□ -0.55
ACTN1-206ENST00000544964 TLX1P31314 330 aaPredicted RBP11.6□□□□□ -0.55
ACTN1-206ENST00000544964 ALDH9A1P49189 494 aa11.6□□□□□ -0.55
ACTN1-206ENST00000544964 IDH3AP50213 366 aa11.6□□□□□ -0.55
ACTN1-206ENST00000544964 TRA2BP62995 288 aaKnown RBP11.6□□□□□ -0.55
ACTN1-206ENST00000544964 GNGT1P63211 74 aa11.6□□□□□ -0.55
ACTN1-206ENST00000544964 ADORA2A-AS1P86434 159 aa11.6□□□□□ -0.55
ACTN1-206ENST00000544964 ID2Q02363 134 aa11.6□□□□□ -0.55
ACTN1-206ENST00000544964 EMX2Q04743 252 aa11.6□□□□□ -0.55
ACTN1-206ENST00000544964 ZNF763Q0D2J5 394 aa11.6□□□□□ -0.55
ACTN1-206ENST00000544964 C2orf80Q0P641 193 aa11.6□□□□□ -0.55
ACTN1-206ENST00000544964 SLC13A2Q13183 592 aa11.6□□□□□ -0.55
ACTN1-206ENST00000544964 EXT1Q16394 746 aa11.6□□□□□ -0.55
ACTN1-206ENST00000544964 C3AR1Q16581 482 aa11.6□□□□□ -0.55
ACTN1-206ENST00000544964 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.6□□□□□ -0.55
ACTN1-206ENST00000544964 SFT2D3Q587I9 215 aa11.6□□□□□ -0.55
ACTN1-206ENST00000544964 CGB2Q6NT52 195 aa11.6□□□□□ -0.55
ACTN1-206ENST00000544964 QSOX2Q6ZRP7 698 aa11.6□□□□□ -0.55
ACTN1-206ENST00000544964 MCEMP1Q8IX19 187 aa11.6□□□□□ -0.55
ACTN1-206ENST00000544964 ZNF595Q8IYB9 648 aa11.6□□□□□ -0.55
ACTN1-206ENST00000544964 LIX1Q8N485 282 aa11.6□□□□□ -0.55
ACTN1-206ENST00000544964 ZNF808Q8N4W9 903 aaPredicted RBP11.6□□□□□ -0.55
ACTN1-206ENST00000544964 PLPP5Q8NEB5 264 aa11.6□□□□□ -0.55
ACTN1-206ENST00000544964 M1APQ8TC57 530 aa11.6□□□□□ -0.55
ACTN1-206ENST00000544964 GFM2Q969S9 779 aaKnown RBP11.6□□□□□ -0.55
ACTN1-206ENST00000544964 ZNF354BQ96LW1 612 aa11.6□□□□□ -0.55
ACTN1-206ENST00000544964 FRMD6Q96NE9 622 aa11.6□□□□□ -0.55
ACTN1-206ENST00000544964 TSSK3Q96PN8 268 aa11.6□□□□□ -0.55
ACTN1-206ENST00000544964 ZNF317Q96PQ6 595 aaPredicted RBP11.6□□□□□ -0.55
ACTN1-206ENST00000544964 WDR41Q9HAD4 459 aa11.6□□□□□ -0.55
ACTN1-206ENST00000544964 KCNK13Q9HB14 408 aa11.6□□□□□ -0.55
ACTN1-206ENST00000544964 PRDM9Q9NQV7 894 aa11.6□□□□□ -0.55
ACTN1-206ENST00000544964 ANKRD10Q9NXR5 420 aa11.6□□□□□ -0.55
ACTN1-206ENST00000544964 SUCOQ9UBS9 1254 aaKnown RBP11.6□□□□□ -0.55
ACTN1-206ENST00000544964 DCTN4Q9UJW0 460 aa11.6□□□□□ -0.55
ACTN1-206ENST00000544964 TINAGQ9UJW2 476 aa11.6□□□□□ -0.55
ACTN1-206ENST00000544964 EIF3LQ9Y262 564 aaKnown RBP11.6□□□□□ -0.55
ACTN1-206ENST00000544964 TMED5Q9Y3A6 229 aa11.6□□□□□ -0.55
ACTN1-206ENST00000544964 PCDHA9Q9Y5H5 950 aa11.6□□□□□ -0.55
ACTN1-206ENST00000544964 MTORP42345 2549 aa11.6□□□□□ -0.55
ACTN1-206ENST00000544964 C1orf226A1L170 272 aa11.59□□□□□ -0.55
ACTN1-206ENST00000544964 GABRR3A8MPY1 467 aa11.59□□□□□ -0.55
ACTN1-206ENST00000544964 CLDN4O14493 209 aa11.59□□□□□ -0.55
ACTN1-206ENST00000544964 AKAP10O43572 662 aa11.59□□□□□ -0.55
ACTN1-206ENST00000544964 FGF17O60258 216 aa11.59□□□□□ -0.55
ACTN1-206ENST00000544964 CTNSO60931 367 aa11.59□□□□□ -0.55
ACTN1-206ENST00000544964 NEURL1O76050 574 aa11.59□□□□□ -0.55
ACTN1-206ENST00000544964 LRATO95237 230 aa11.59□□□□□ -0.55
ACTN1-206ENST00000544964 TGDSO95455 350 aa11.59□□□□□ -0.55
ACTN1-206ENST00000544964 ALDOCP09972 364 aaKnown RBP11.59□□□□□ -0.55
ACTN1-206ENST00000544964 MAPK1P28482 360 aa11.59□□□□□ -0.55
ACTN1-206ENST00000544964 CD96P40200 585 aa11.59□□□□□ -0.55
ACTN1-206ENST00000544964 SEC24CP53992 1094 aa11.59□□□□□ -0.55
ACTN1-206ENST00000544964 DIO3P55073 304 aa11.59□□□□□ -0.55
ACTN1-206ENST00000544964 HSD17B7P56937 341 aa11.59□□□□□ -0.55
ACTN1-206ENST00000544964 ERVK-8P63133 956 aa11.59□□□□□ -0.55
ACTN1-206ENST00000544964 MAD2L1Q13257 205 aaPredicted RBP11.59□□□□□ -0.55
ACTN1-206ENST00000544964 CDSNQ15517 529 aa11.59□□□□□ -0.55
ACTN1-206ENST00000544964 OR1C1Q15619 314 aa11.59□□□□□ -0.55
ACTN1-206ENST00000544964 NSDHLQ15738 373 aa11.59□□□□□ -0.55
ACTN1-206ENST00000544964 MEP1AQ16819 746 aa11.59□□□□□ -0.55
ACTN1-206ENST00000544964 SPINK14Q6IE38 97 aa11.59□□□□□ -0.55
ACTN1-206ENST00000544964 FAM71E1Q6IPT2 247 aa11.59□□□□□ -0.55
ACTN1-206ENST00000544964 RPTNQ6XPR3 784 aa11.59□□□□□ -0.55
ACTN1-206ENST00000544964 ACAD11Q709F0 780 aa11.59□□□□□ -0.55
ACTN1-206ENST00000544964 MRGPRGQ86SM5 289 aa11.59□□□□□ -0.55
ACTN1-206ENST00000544964 SIAH3Q8IW03 269 aa11.59□□□□□ -0.55
ACTN1-206ENST00000544964 SCUBE1Q8IWY4 988 aa11.59□□□□□ -0.55
ACTN1-206ENST00000544964 LGI4Q8N135 537 aa11.59□□□□□ -0.55
ACTN1-206ENST00000544964 TMEM132CQ8N3T6 1108 aa11.59□□□□□ -0.55
ACTN1-206ENST00000544964 KIF2BQ8N4N8 673 aa11.59□□□□□ -0.55
ACTN1-206ENST00000544964 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.59□□□□□ -0.55
ACTN1-206ENST00000544964 THAP3Q8WTV1 239 aaPredicted RBP11.59□□□□□ -0.55
ACTN1-206ENST00000544964 ANKRD9Q96BM1 317 aaPredicted RBP11.59□□□□□ -0.55
ACTN1-206ENST00000544964 MAELQ96JY0 434 aaKnown RBP11.59□□□□□ -0.55
ACTN1-206ENST00000544964 MARK4Q96L34 752 aa11.59□□□□□ -0.55
ACTN1-206ENST00000544964 GPR137Q96N19 417 aa11.59□□□□□ -0.55
ACTN1-206ENST00000544964 UTP23Q9BRU9 249 aaKnown RBP11.59□□□□□ -0.55
ACTN1-206ENST00000544964 FAIM2Q9BWQ8 316 aa11.59□□□□□ -0.55
ACTN1-206ENST00000544964 TSPAN10Q9H1Z9 355 aaPredicted RBP11.59□□□□□ -0.55
ACTN1-206ENST00000544964 MYNNQ9NPC7 610 aa11.59□□□□□ -0.55
ACTN1-206ENST00000544964 KLHL1Q9NR64 748 aa11.59□□□□□ -0.55
ACTN1-206ENST00000544964 ZNF835Q9Y2P0 537 aa11.59□□□□□ -0.55
ACTN1-206ENST00000544964 MMACHCQ9Y4U1 282 aa11.59□□□□□ -0.55
ACTN1-206ENST00000544964 CLDN16Q9Y5I7 305 aa11.59□□□□□ -0.55
ACTN1-206ENST00000544964 DNAJC13O75165 2243 aa11.59□□□□□ -0.55
ACTN1-206ENST00000544964 ZNF407Q9C0G0 2248 aa11.58□□□□□ -0.56
ACTN1-206ENST00000544964 IGKV3D-11A0A0A0MRZ8 115 aa11.58□□□□□ -0.56
ACTN1-206ENST00000544964 A0A0G2JND7 137 aa11.58□□□□□ -0.56
ACTN1-206ENST00000544964 A0A1W2PS29 197 aa11.58□□□□□ -0.56
ACTN1-206ENST00000544964 A8MUA0 341 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms