RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 MGLLQ99685 303 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 ZNF334Q9HCZ1 680 aaPredicted RBP12.19□□□□□ -0.46
CHD4-211ENST00000544484 STARD5Q9NSY2 213 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 PARPBPQ9NWS1 579 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 TMEM9Q9P0T7 183 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 TEX13DA0A0J9YY54 714 aaPredicted RBP12.19□□□□□ -0.46
CHD4-211ENST00000544484 A8MV72 311 aaPredicted RBP12.19□□□□□ -0.46
CHD4-211ENST00000544484 SOX9P48436 509 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 GALK2Q01415 458 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 PARS2Q7L3T8 475 aaKnown RBP12.19□□□□□ -0.46
CHD4-211ENST00000544484 ACVR1CQ8NER5 493 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 OR52N2Q8NGI0 321 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 OR8J1Q8NGP2 316 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 SGTBQ96EQ0 304 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 FBXL3Q9UKT7 428 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 TFPTP0C1Z6 253 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 SLC6A11P48066 632 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 FXYD6P3P58550 94 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 EMC10Q5UCC4 262 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 ZC3H14Q6PJT7 736 aaKnown RBP12.19□□□□□ -0.46
CHD4-211ENST00000544484 PLEKHG7Q6ZR37 379 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 PAQR9Q6ZVX9 377 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 FRS2Q8WU20 508 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 NANSQ9NR45 359 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 KCMF1Q9P0J7 381 aa12.19□□□□□ -0.46
CHD4-211ENST00000544484 ZNF16P17020 682 aaPredicted RBP12.18□□□□□ -0.46
CHD4-211ENST00000544484 P2RY2P41231 377 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 CD97P48960 835 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 GPR143P51810 404 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 PTPRRQ15256 657 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 HNRNPA1L2Q32P51 320 aaKnown RBP12.18□□□□□ -0.46
CHD4-211ENST00000544484 LIPIQ6XZB0 460 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 HACD2Q6Y1H2 254 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 MROQ9BYG7 248 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 ZDHHC7Q9NXF8 308 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 PCDHGB2Q9Y5G2 931 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 PCDHGA7Q9Y5G6 932 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 SEC14L5O43304 696 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 PLATP00750 562 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 PEPDP12955 493 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 OXTRP30559 389 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 CLCA4Q14CN2 919 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 SPRED3Q2MJR0 410 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 IQCF1Q8N6M8 205 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 ZNF611Q8N823 705 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 LMNTD1Q8N9Z9 388 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 APOOQ9BUR5 198 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 ZNF717Q9BY31 904 aaPredicted RBP12.18□□□□□ -0.46
CHD4-211ENST00000544484 CSNK1G1Q9HCP0 422 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 C14orf119Q9NWQ9 140 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 RARRES3Q9UL19 164 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 NDUFV2P19404 249 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 RPS3P23396 243 aaKnown RBP eCLIP12.18□□□□□ -0.462e-6■■■■□ 25.3
CHD4-211ENST00000544484 Q6ZSR6 202 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 SLC5A8Q8N695 610 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 TEX26Q8N6G2 289 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 HHIPQ96QV1 700 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 ZFYVE21Q9BQ24 234 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 LMAN1LQ9HAT1 526 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 GPR83Q9NYM4 423 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 FBXO9Q9UK97 447 aaPredicted RBP12.18□□□□□ -0.46
CHD4-211ENST00000544484 BAIAP2Q9UQB8 552 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 KLHL33A6NCF5 533 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 IFNA21P01568 189 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 RABIFP47224 123 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.18□□□□□ -0.46
CHD4-211ENST00000544484 NKAPLQ5M9Q1 402 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 KCTD18Q6PI47 426 aaPredicted RBP12.18□□□□□ -0.46
CHD4-211ENST00000544484 ZNF367Q7RTV3 350 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 TMEM151AQ8N4L1 468 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 OR4K5Q8NGD3 323 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 OR52E2Q8NGJ4 325 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 OR4K13Q8NH42 304 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 SORT1Q99523 831 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 SH2B3Q9UQQ2 575 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 M0R3H8 397 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 FARS2O95363 451 aaKnown RBP12.18□□□□□ -0.46
CHD4-211ENST00000544484 PROS1P07225 676 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 RCAN2Q14206 197 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 GRM7Q14831 915 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 HSD17B12Q53GQ0 312 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 ALG10BQ5I7T1 473 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 PLXDC1Q8IUK5 500 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 GPR150Q8NGU9 434 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 SLC22A8Q8TCC7 542 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 RLN3Q8WXF3 142 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 CXXC1Q9P0U4 656 aaPredicted RBP12.18□□□□□ -0.46
CHD4-211ENST00000544484 CLEC4EQ9ULY5 219 aa12.18□□□□□ -0.46
CHD4-211ENST00000544484 TMEM189-UBE2V1I3L0A0 370 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 CHP2O43745 196 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 SYNGR4O95473 234 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 HPRP00739 348 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 HSD17B1P14061 328 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 RGNQ15493 299 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 SPHARQ15513 63 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 DEFB133Q30KQ1 61 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 GXYLT1Q4G148 440 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 LCN8Q6JVE9 175 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 NRMQ8IXM6 262 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 RNF175Q8N4F7 328 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms