RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 ERC1Q8IUD2 1116 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 SLC22A15Q8IZD6 547 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 ELMOD1Q8N336 334 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 GANCQ8TET4 914 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 PCED1BQ96HM7 432 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 MAGED4Q96JG8 741 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 COQ7Q99807 217 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 TRPV6Q9H1D0 765 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 FNDC4Q9H6D8 234 aaPredicted RBP3.2□□□□□ -1.9
SCFD1-207ENST00000544052 MARCH7Q9H992 704 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 NGBQ9NPG2 151 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 TECRQ9NZ01 308 aaKnown RBP3.2□□□□□ -1.9
SCFD1-207ENST00000544052 CNOT2Q9NZN8 540 aaKnown RBP3.2□□□□□ -1.9
SCFD1-207ENST00000544052 CLIP2Q9UDT6 1046 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 PLA2G4CQ9UP65 541 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 MYH15Q9Y2K3 1946 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 ZSWIM8A7E2V4 1837 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 TNRC18O15417 2968 aaPredicted RBP3.2□□□□□ -1.9
SCFD1-207ENST00000544052 TMEM89A2RUT3 159 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 SHISA7A6NL88 538 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 NPIPB9F8W1W9 429 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 RASGRF2O14827 1237 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 TXNDC12O95881 172 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 CXCL10P02778 98 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 PROS1P07225 676 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 CEBPBP17676 345 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 FUT1P19526 365 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 STIP1P31948 543 aaKnown RBP3.2□□□□□ -1.9
SCFD1-207ENST00000544052 SLC6A12P48065 614 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 GPC3P51654 580 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 CCL11P51671 97 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 GEMP55040 296 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 SNRPD1P62314 119 aaKnown RBP3.2□□□□□ -1.9
SCFD1-207ENST00000544052 IRX4P78413 519 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 CCZ1BP86790 482 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 CCZ1P86791 482 aaPredicted RBP3.2□□□□□ -1.9
SCFD1-207ENST00000544052 TAB1Q15750 504 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 LDLRAP1Q5SW96 308 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 RUSC1-AS1Q66K80 236 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 KIF6Q6ZMV9 814 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 HSCBQ8IWL3 235 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 KLHDC8BQ8IXV7 354 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 LEMD2Q8NC56 503 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 RPLP0P6Q8NHW5 317 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 MAPK15Q8TD08 544 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 TMEM190Q8WZ59 177 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 LURAP1Q96LR2 239 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 S1PR3Q99500 378 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 PAPOLGQ9BWT3 736 aaKnown RBP3.2□□□□□ -1.9
SCFD1-207ENST00000544052 PITPNM3Q9BZ71 974 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 EGLN1Q9GZT9 426 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 SLC26A1Q9H2B4 701 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 ACOXLQ9NUZ1 547 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 TAS2R3Q9NYW6 316 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 TEKT2Q9UIF3 430 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 MRTO4Q9UKD2 239 aaKnown RBP3.2□□□□□ -1.9
SCFD1-207ENST00000544052 PPP1R3CQ9UQK1 317 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 PLEKHA6Q9Y2H5 1048 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 MRPS28Q9Y2Q9 187 aaKnown RBP3.2□□□□□ -1.9
SCFD1-207ENST00000544052 ATP6V0A2Q9Y487 856 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 ATG4BQ9Y4P1 393 aa3.2□□□□□ -1.9
SCFD1-207ENST00000544052 MYH13Q9UKX3 1938 aa3.19□□□□□ -1.9
SCFD1-207ENST00000544052 ATP8B3O60423 1300 aa3.19□□□□□ -1.9
SCFD1-207ENST00000544052 MAPK8IP3Q9UPT6 1336 aa3.19□□□□□ -1.9
SCFD1-207ENST00000544052 A8MU76 341 aa3.19□□□□□ -1.9
SCFD1-207ENST00000544052 KPNA7A9QM74 516 aa3.19□□□□□ -1.9
SCFD1-207ENST00000544052 K7EPI3 171 aa3.19□□□□□ -1.9
SCFD1-207ENST00000544052 SURF4O15260 269 aa3.19□□□□□ -1.9
SCFD1-207ENST00000544052 IGHEP01854 428 aa3.19□□□□□ -1.9
SCFD1-207ENST00000544052 LYNP07948 512 aa3.19□□□□□ -1.9
SCFD1-207ENST00000544052 SFTPBP07988 381 aa3.19□□□□□ -1.9
SCFD1-207ENST00000544052 SELEP16581 610 aa3.19□□□□□ -1.9
SCFD1-207ENST00000544052 C4BPBP20851 252 aa3.19□□□□□ -1.9
SCFD1-207ENST00000544052 GLRA1P23415 457 aa3.19□□□□□ -1.9
SCFD1-207ENST00000544052 GIFP27352 417 aa3.19□□□□□ -1.9
SCFD1-207ENST00000544052 SLC26A5P58743 744 aa3.19□□□□□ -1.9
SCFD1-207ENST00000544052 OR1C1Q15619 314 aa3.19□□□□□ -1.9
SCFD1-207ENST00000544052 ZNF876PQ49A33 203 aa3.19□□□□□ -1.9
SCFD1-207ENST00000544052 GPAT3Q53EU6 434 aa3.19□□□□□ -1.9
SCFD1-207ENST00000544052 CES4AQ5XG92 561 aa3.19□□□□□ -1.9
SCFD1-207ENST00000544052 TRIM65Q6PJ69 517 aa3.19□□□□□ -1.9
SCFD1-207ENST00000544052 RBM43Q6ZSC3 357 aaKnown RBP3.19□□□□□ -1.9
SCFD1-207ENST00000544052 CATSPERDQ86XM0 798 aa3.19□□□□□ -1.9
SCFD1-207ENST00000544052 LSMEM2Q8N112 164 aa3.19□□□□□ -1.9
SCFD1-207ENST00000544052 RELL2Q8NC24 303 aaPredicted RBP3.19□□□□□ -1.9
SCFD1-207ENST00000544052 ZBTB44Q8NCP5 570 aa3.19□□□□□ -1.9
SCFD1-207ENST00000544052 OR6M1Q8NGM8 313 aa3.19□□□□□ -1.9
SCFD1-207ENST00000544052 RAB39BQ96DA2 213 aa3.19□□□□□ -1.9
SCFD1-207ENST00000544052 SPAG8Q99932 426 aaPredicted RBP3.19□□□□□ -1.9
SCFD1-207ENST00000544052 CLEC7AQ9BXN2 247 aa3.19□□□□□ -1.9
SCFD1-207ENST00000544052 GANQ9H2C0 597 aa3.19□□□□□ -1.9
SCFD1-207ENST00000544052 VIPAS39Q9H9C1 493 aa3.19□□□□□ -1.9
SCFD1-207ENST00000544052 S100A14Q9HCY8 104 aa3.19□□□□□ -1.9
SCFD1-207ENST00000544052 SPHK2Q9NRA0 654 aa3.19□□□□□ -1.9
SCFD1-207ENST00000544052 FAM205AQ6ZU69 1335 aa3.19□□□□□ -1.9
SCFD1-207ENST00000544052 ZNF609O15014 1411 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 A0A087X002 238 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 TLX2O43763 284 aaPredicted RBP3.18□□□□□ -1.9
SCFD1-207ENST00000544052 NME2P1O60361 137 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 SMPD2O60906 423 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms