RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 SHQ1Q6PI26 577 aaKnown RBP18.6■□□□□ 0.57
COPS7A-218ENST00000543939 PRSS42Q7Z5A4 293 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 HIPK1Q86Z02 1210 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 N4BP2L2Q92802 583 aaPredicted RBP18.6■□□□□ 0.57
COPS7A-218ENST00000543939 OTUB1Q96FW1 271 aaPredicted RBP18.6■□□□□ 0.57
COPS7A-218ENST00000543939 OR7D2Q96RA2 312 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 TREX2Q9BQ50 279 aaPredicted RBP18.6■□□□□ 0.57
COPS7A-218ENST00000543939 OSBPL10Q9BXB5 764 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 ANKRD60Q9BZ19 345 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 CLK4Q9HAZ1 481 aaKnown RBP18.6■□□□□ 0.57
COPS7A-218ENST00000543939 CAPN10Q9HC96 672 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 THSD1Q9NS62 852 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 DDX18Q9NVP1 670 aaKnown RBP18.6■□□□□ 0.57
COPS7A-218ENST00000543939 PTGFRNQ9P2B2 879 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 PCDHGB5Q9Y5G0 923 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 U3KQA8 63 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 USP34Q70CQ2 3546 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 ADAMTS20P59510 1910 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 ASNA1O43681 348 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 NR2F1P10589 423 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 RNH1P13489 461 aaKnown RBP18.6■□□□□ 0.57
COPS7A-218ENST00000543939 TNFRSF1BP20333 461 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 CD247P20963 164 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 LAMA1P25391 3075 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 SEPHS1P49903 392 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 CHN2P52757 468 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 FUT5Q11128 374 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 GRM7Q14831 915 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 NR0B2Q15466 257 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 SLC36A3Q495N2 470 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 FHL5Q5TD97 284 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 FAM111BQ6SJ93 734 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 D2HGDHQ8N465 521 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 SMYD1Q8NB12 490 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 OR6C4Q8NGE1 309 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 GEMIN6Q8WXD5 167 aaKnown RBP18.6■□□□□ 0.57
COPS7A-218ENST00000543939 SLC41A2Q96JW4 573 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 MS4A4EQ96PG1 132 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 RSPO3Q9BXY4 272 aaPredicted RBP18.6■□□□□ 0.57
COPS7A-218ENST00000543939 ACTRT3Q9BYD9 372 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 GAREM1Q9H706 876 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 SMURF2Q9HAU4 748 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 BCL2L10Q9HD36 194 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 IRAK4Q9NWZ3 460 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 NDUFAF4Q9P032 175 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 HCN3Q9P1Z3 774 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 IFT80Q9P2H3 777 aaPredicted RBP18.6■□□□□ 0.57
COPS7A-218ENST00000543939 U3KQV3 271 aa18.6■□□□□ 0.57
COPS7A-218ENST00000543939 CASC3O15234 703 aaKnown RBP18.59■□□□□ 0.57
COPS7A-218ENST00000543939 RECKO95980 971 aa18.59■□□□□ 0.57
COPS7A-218ENST00000543939 IFI6P09912 130 aa18.59■□□□□ 0.57
COPS7A-218ENST00000543939 PPP2R1BP30154 601 aa18.59■□□□□ 0.57
COPS7A-218ENST00000543939 DNAJA1P31689 397 aaKnown RBP18.59■□□□□ 0.57
COPS7A-218ENST00000543939 DUSP7Q16829 419 aa18.59■□□□□ 0.57
COPS7A-218ENST00000543939 MFSD12Q6NUT3 480 aa18.59■□□□□ 0.57
COPS7A-218ENST00000543939 ZNF607Q96SK3 696 aa18.59■□□□□ 0.57
COPS7A-218ENST00000543939 RBM4BQ9BQ04 359 aaKnown RBP18.59■□□□□ 0.57
COPS7A-218ENST00000543939 RBM4Q9BWF3 364 aaKnown RBP18.59■□□□□ 0.57
COPS7A-218ENST00000543939 GABARAPL1Q9H0R8 117 aa18.59■□□□□ 0.57
COPS7A-218ENST00000543939 RUBCNLQ9H714 662 aa18.59■□□□□ 0.57
COPS7A-218ENST00000543939 EQTNQ9NQ60 294 aa18.59■□□□□ 0.57
COPS7A-218ENST00000543939 GPC6Q9Y625 555 aaPredicted RBP18.59■□□□□ 0.57
COPS7A-218ENST00000543939 KCNE3Q9Y6H6 103 aa18.59■□□□□ 0.57
COPS7A-218ENST00000543939 A0A087WV62 115 aa18.58■□□□□ 0.57
COPS7A-218ENST00000543939 MYOCOSA0A1B0GUC4 107 aa18.58■□□□□ 0.57
COPS7A-218ENST00000543939 SIGLEC6O43699 453 aa18.58■□□□□ 0.57
COPS7A-218ENST00000543939 SLITRK5O94991 958 aa18.58■□□□□ 0.57
COPS7A-218ENST00000543939 SNAP29O95721 258 aa18.58■□□□□ 0.57
COPS7A-218ENST00000543939 FPR1P21462 350 aa18.58■□□□□ 0.57
COPS7A-218ENST00000543939 OR1E2P47887 323 aa18.58■□□□□ 0.57
COPS7A-218ENST00000543939 ARL4DP49703 201 aa18.58■□□□□ 0.57
COPS7A-218ENST00000543939 CRISP3P54108 245 aa18.58■□□□□ 0.57
COPS7A-218ENST00000543939 GNA13Q14344 377 aa18.58■□□□□ 0.57
COPS7A-218ENST00000543939 CYP27C1Q4G0S4 372 aa18.58■□□□□ 0.57
COPS7A-218ENST00000543939 SNAP47Q5SQN1 464 aa18.58■□□□□ 0.57
COPS7A-218ENST00000543939 KMT5CQ86Y97 462 aa18.58■□□□□ 0.57
COPS7A-218ENST00000543939 DHRSXQ8N5I4 330 aa18.58■□□□□ 0.57
COPS7A-218ENST00000543939 FAM181AQ8N9Y4 354 aa18.58■□□□□ 0.57
COPS7A-218ENST00000543939 GPR32P1Q8NGA4 272 aa18.58■□□□□ 0.57
COPS7A-218ENST00000543939 BBS10Q8TAM1 723 aa18.58■□□□□ 0.57
COPS7A-218ENST00000543939 CEP76Q8TAP6 659 aa18.58■□□□□ 0.57
COPS7A-218ENST00000543939 ZNF675Q8TD23 568 aa18.58■□□□□ 0.57
COPS7A-218ENST00000543939 ADAMTS18Q8TE60 1221 aa18.58■□□□□ 0.57
COPS7A-218ENST00000543939 APOBEC4Q8WW27 367 aaKnown RBP18.58■□□□□ 0.57
COPS7A-218ENST00000543939 NRBF2Q96F24 287 aa18.58■□□□□ 0.57
COPS7A-218ENST00000543939 RDH12Q96NR8 316 aa18.58■□□□□ 0.57
COPS7A-218ENST00000543939 NUDT22Q9BRQ3 303 aa18.58■□□□□ 0.57
COPS7A-218ENST00000543939 C19orf53Q9UNZ5 99 aaPredicted RBP18.58■□□□□ 0.57
COPS7A-218ENST00000543939 NINQ8N4C6 2090 aa18.58■□□□□ 0.56
COPS7A-218ENST00000543939 BLACEA4D250 179 aa18.57■□□□□ 0.56
COPS7A-218ENST00000543939 PATE3B3GLJ2 98 aa18.57■□□□□ 0.56
COPS7A-218ENST00000543939 CHRM4P08173 479 aa18.57■□□□□ 0.56
COPS7A-218ENST00000543939 THRBP10828 461 aa18.57■□□□□ 0.56
COPS7A-218ENST00000543939 PRKACGP22612 351 aa18.57■□□□□ 0.56
COPS7A-218ENST00000543939 CAPGP40121 348 aa18.57■□□□□ 0.56
COPS7A-218ENST00000543939 AVPR1BP47901 424 aa18.57■□□□□ 0.56
COPS7A-218ENST00000543939 MAT1AQ00266 395 aaKnown RBP18.57■□□□□ 0.56
COPS7A-218ENST00000543939 MGAT2Q10469 447 aa18.57■□□□□ 0.56
COPS7A-218ENST00000543939 SQSTM1Q13501 440 aa18.57■□□□□ 0.56
COPS7A-218ENST00000543939 PRICKLE4Q2TBC4 344 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms