RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 MERTKQ12866 999 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 TMEM31Q5JXX7 168 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 LARP4Q71RC2 724 aaKnown RBP eCLIP6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 TMEM151BQ8IW70 566 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 ARL14Q8N4G2 192 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 ALPK1Q96QP1 1244 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 TSSK6Q9BXA6 273 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 NCOR1P1Q9H4R4 102 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 DENND2DQ9H6A0 471 aaPredicted RBP6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 GAREM1Q9H706 876 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 METTL8Q9H825 291 aaKnown RBP6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 PRSS16Q9NQE7 514 aa6.58□□□□□ -1.36
SRGAP1-206ENST00000543397 MYH10P35580 1976 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 H3BUI4 141 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 ZNF821O75541 412 aaPredicted RBP6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 CH25HO95992 272 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 PNPP00491 289 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 CSTBP04080 98 aaKnown RBP6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 CBLP22681 906 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 TNFSF4P23510 183 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 SLC15A1P46059 708 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 C21orf58P58505 322 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 POU4F3Q15319 338 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 SF3B4Q15427 424 aaKnown RBP eCLIP6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 CYBRD1Q53TN4 286 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 C9orf50Q5SZB4 431 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 ADNP2Q6IQ32 1131 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 TMPRSS9Q7Z410 1059 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 ARHGAP12Q8IWW6 846 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 OR52E1Q8NGJ3 308 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 CANT1Q8WVQ1 401 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 ELSPBP1Q96BH3 223 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 RTP4Q96DX8 246 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 SLC39A13Q96H72 371 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 WDR77Q9BQA1 342 aaPredicted RBP6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 GINS4Q9BRT9 223 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 NPLQ9BXD5 320 aaPredicted RBP6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 UCK2Q9BZX2 261 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 TAAR2Q9P1P5 351 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 TNFRSF10DQ9UBN6 386 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 CA5BQ9Y2D0 317 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 PCDHB14Q9Y5E9 798 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 A0A0U1RQS6 177 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 TLR4O00206 839 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 PRAMEF2O60811 474 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 MMP2P08253 660 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 FBXO45P0C2W1 286 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 PET100P0DJ07 73 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 PRKAR1AP10644 381 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 SDC2P34741 201 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 CAPZA1P52907 286 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 OR2B6P58173 313 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 SCN1BQ07699 218 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 DAG1Q14118 895 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 SMCO1Q147U7 214 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 UNC50Q53HI1 259 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 RABL3Q5HYI8 236 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 C6orf52Q5T4I8 152 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 STEAP4Q687X5 459 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 FBXO42Q6P3S6 717 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 FAM131AQ6UXB0 335 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 GALNT10Q86SR1 603 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 ZBTB34Q8NCN2 500 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 OR52B6Q8NGF0 335 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 OR2A12Q8NGT7 310 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 OR14L1PQ8NHC6 308 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 THEM6Q8WUY1 208 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 DCBLD2Q96PD2 775 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 NAA11Q9BSU3 229 aaPredicted RBP6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 POLR2J2Q9GZM3 115 aaKnown RBP6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 KCNK12Q9HB15 430 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 TREM1Q9NP99 234 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 POT1Q9NUX5 634 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 QPCTLQ9NXS2 382 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 RAB26Q9ULW5 256 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 COMMD3-BMI1R4GMX3 469 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 E7ENX8 843 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 C11orf98E9PRG8 122 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 EIF1AYO14602 144 aaKnown RBP6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 EI24O14681 340 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 RPP14O95059 124 aaKnown RBP6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 ZNF45Q02386 682 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 RBBP4Q09028 425 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 QPRTQ15274 297 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 KLHL36Q8N4N3 616 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 YIPF7Q8N8F6 280 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 OR2L2Q8NH16 312 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 DOK4Q8TEW6 326 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 TSPEARQ8WU66 669 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 RRNAD1Q96FB5 475 aaKnown RBP6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 CPNE2Q96FN4 548 aaPredicted RBP6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 PYURFQ96I23 114 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 SERINC2Q96SA4 455 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 AMBNQ9NP70 447 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 MYH8P13535 1937 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 KNTC1P50748 2209 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 A0A0A6YYC8 382 aaPredicted RBP6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 CCDC182A6NF36 153 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 ZNF670-ZNF695F2Z2N8 137 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 I3L1I5 382 aaPredicted RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms