RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 ZBED6CLQ96FA7 236 aaPredicted RBP15.9■□□□□ 0.14
RABGGTA-203ENST00000543002 THOC1Q96FV9 657 aaKnown RBP15.9■□□□□ 0.14
RABGGTA-203ENST00000543002 BBC3Q96PG8 261 aaPredicted RBP15.9■□□□□ 0.14
RABGGTA-203ENST00000543002 CDCP1Q9H5V8 836 aa15.9■□□□□ 0.14
RABGGTA-203ENST00000543002 NPHS2Q9NP85 383 aa15.9■□□□□ 0.14
RABGGTA-203ENST00000543002 ACSS1Q9NUB1 689 aaPredicted RBP15.9■□□□□ 0.14
RABGGTA-203ENST00000543002 ATAD3AQ9NVI7 634 aa15.9■□□□□ 0.14
RABGGTA-203ENST00000543002 FGFR1OP2Q9NVK5 253 aa15.9■□□□□ 0.14
RABGGTA-203ENST00000543002 STMN3Q9NZ72 180 aa15.9■□□□□ 0.14
RABGGTA-203ENST00000543002 TMEM200CA6NKL6 621 aa15.89■□□□□ 0.13
RABGGTA-203ENST00000543002 UBDO15205 165 aa15.89■□□□□ 0.13
RABGGTA-203ENST00000543002 MLF1P58340 268 aa15.89■□□□□ 0.13
RABGGTA-203ENST00000543002 MRPS35P82673 323 aaKnown RBP15.89■□□□□ 0.13
RABGGTA-203ENST00000543002 TRMT12Q53H54 448 aaKnown RBP15.89■□□□□ 0.13
RABGGTA-203ENST00000543002 C9orf40Q8IXQ3 194 aa15.89■□□□□ 0.13
RABGGTA-203ENST00000543002 ZNF615Q8N8J6 731 aa15.89■□□□□ 0.13
RABGGTA-203ENST00000543002 OR5L2Q8NGL0 311 aa15.89■□□□□ 0.13
RABGGTA-203ENST00000543002 RFWD2Q8NHY2 731 aa15.89■□□□□ 0.13
RABGGTA-203ENST00000543002 ZFP28Q8NHY6 868 aa15.89■□□□□ 0.13
RABGGTA-203ENST00000543002 NUBPLQ8TB37 319 aa15.89■□□□□ 0.13
RABGGTA-203ENST00000543002 THAP3Q8WTV1 239 aaPredicted RBP15.89■□□□□ 0.13
RABGGTA-203ENST00000543002 SLC39A7Q92504 469 aa15.89■□□□□ 0.13
RABGGTA-203ENST00000543002 KAT2AQ92830 837 aa15.89■□□□□ 0.13
RABGGTA-203ENST00000543002 TESCQ96BS2 214 aa15.89■□□□□ 0.13
RABGGTA-203ENST00000543002 ZNF317Q96PQ6 595 aaPredicted RBP15.89■□□□□ 0.13
RABGGTA-203ENST00000543002 BHLHE41Q9C0J9 482 aaPredicted RBP15.89■□□□□ 0.13
RABGGTA-203ENST00000543002 OR10A5Q9H207 317 aa15.89■□□□□ 0.13
RABGGTA-203ENST00000543002 DCTN4Q9UJW0 460 aa15.89■□□□□ 0.13
RABGGTA-203ENST00000543002 ATRXP46100 2492 aa15.88■□□□□ 0.13
RABGGTA-203ENST00000543002 TNRC6AQ8NDV7 1962 aaKnown RBP15.88■□□□□ 0.13
RABGGTA-203ENST00000543002 PLOD2O00469 737 aa15.88■□□□□ 0.13
RABGGTA-203ENST00000543002 CDK2AP1O14519 115 aa15.88■□□□□ 0.13
RABGGTA-203ENST00000543002 MAN1A2O60476 641 aa15.88■□□□□ 0.13
RABGGTA-203ENST00000543002 PLOD3O60568 738 aa15.88■□□□□ 0.13
RABGGTA-203ENST00000543002 DPM1O60762 260 aa15.88■□□□□ 0.13
RABGGTA-203ENST00000543002 CBX7O95931 251 aa15.88■□□□□ 0.13
RABGGTA-203ENST00000543002 TROVE2P10155 538 aaKnown RBP eCLIP15.88■□□□□ 0.13
RABGGTA-203ENST00000543002 CLNS1AP54105 237 aaKnown RBP15.88■□□□□ 0.13
RABGGTA-203ENST00000543002 UFM1P61960 85 aa15.88■□□□□ 0.13
RABGGTA-203ENST00000543002 MLC1Q15049 377 aa15.88■□□□□ 0.13
RABGGTA-203ENST00000543002 RPS6KA2Q15349 733 aa15.88■□□□□ 0.13
RABGGTA-203ENST00000543002 PDCD4Q53EL6 469 aaKnown RBP15.88■□□□□ 0.13
RABGGTA-203ENST00000543002 SLC29A4Q7RTT9 530 aa15.88■□□□□ 0.13
RABGGTA-203ENST00000543002 ZNF551Q7Z340 670 aaPredicted RBP15.88■□□□□ 0.13
RABGGTA-203ENST00000543002 BEST3Q8N1M1 668 aa15.88■□□□□ 0.13
RABGGTA-203ENST00000543002 ZADH2Q8N4Q0 377 aa15.88■□□□□ 0.13
RABGGTA-203ENST00000543002 HAS2Q92819 552 aa15.88■□□□□ 0.13
RABGGTA-203ENST00000543002 MARK4Q96L34 752 aa15.88■□□□□ 0.13
RABGGTA-203ENST00000543002 DUSP26Q9BV47 211 aa15.88■□□□□ 0.13
RABGGTA-203ENST00000543002 RNF32Q9H0A6 362 aa15.88■□□□□ 0.13
RABGGTA-203ENST00000543002 SDR39U1Q9NRG7 319 aaPredicted RBP15.88■□□□□ 0.13
RABGGTA-203ENST00000543002 ABI3Q9P2A4 366 aa15.88■□□□□ 0.13
RABGGTA-203ENST00000543002 MYOTQ9UBF9 498 aa15.88■□□□□ 0.13
RABGGTA-203ENST00000543002 BCAP29Q9UHQ4 241 aa15.88■□□□□ 0.13
RABGGTA-203ENST00000543002 CHD6Q8TD26 2715 aa15.87■□□□□ 0.13
RABGGTA-203ENST00000543002 A0A087WV62 115 aa15.87■□□□□ 0.13
RABGGTA-203ENST00000543002 A0A1W2PRB8 838 aa15.87■□□□□ 0.13
RABGGTA-203ENST00000543002 E9PBE3 544 aa15.87■□□□□ 0.13
RABGGTA-203ENST00000543002 FCHO1O14526 889 aa15.87■□□□□ 0.13
RABGGTA-203ENST00000543002 PRAMEF2O60811 474 aa15.87■□□□□ 0.13
RABGGTA-203ENST00000543002 BCAS2O75934 225 aaPredicted RBP15.87■□□□□ 0.13
RABGGTA-203ENST00000543002 IFI6P09912 130 aa15.87■□□□□ 0.13
RABGGTA-203ENST00000543002 MANFP55145 182 aaKnown RBP15.87■□□□□ 0.13
RABGGTA-203ENST00000543002 NME5P56597 212 aa15.87■□□□□ 0.13
RABGGTA-203ENST00000543002 SRSF11Q05519 484 aaKnown RBP15.87■□□□□ 0.13
RABGGTA-203ENST00000543002 HSPB3Q12988 150 aa15.87■□□□□ 0.13
RABGGTA-203ENST00000543002 DUSP8Q13202 625 aa15.87■□□□□ 0.13
RABGGTA-203ENST00000543002 EXOSC7Q15024 291 aaKnown RBP15.87■□□□□ 0.13
RABGGTA-203ENST00000543002 EBPQ15125 230 aaKnown RBP15.87■□□□□ 0.13
RABGGTA-203ENST00000543002 DPY19L1Q2PZI1 675 aa15.87■□□□□ 0.13
RABGGTA-203ENST00000543002 PGS1Q32NB8 556 aa15.87■□□□□ 0.13
RABGGTA-203ENST00000543002 FHL5Q5TD97 284 aa15.87■□□□□ 0.13
RABGGTA-203ENST00000543002 CGB2Q6NT52 195 aa15.87■□□□□ 0.13
RABGGTA-203ENST00000543002 CPAMD8Q8IZJ3 1885 aa15.87■□□□□ 0.13
RABGGTA-203ENST00000543002 RBMXL3Q8N7X1 1067 aaKnown RBP15.87■□□□□ 0.13
RABGGTA-203ENST00000543002 SIMC1Q8NDZ2 872 aa15.87■□□□□ 0.13
RABGGTA-203ENST00000543002 OR7G2Q8NG99 324 aa15.87■□□□□ 0.13
RABGGTA-203ENST00000543002 OR52R1Q8NGF1 315 aa15.87■□□□□ 0.13
RABGGTA-203ENST00000543002 OR8J2Q8NGG1 315 aa15.87■□□□□ 0.13
RABGGTA-203ENST00000543002 C16orf52Q8NHV5 167 aa15.87■□□□□ 0.13
RABGGTA-203ENST00000543002 ELP4Q96EB1 424 aa15.87■□□□□ 0.13
RABGGTA-203ENST00000543002 TEX37Q96LM6 180 aa15.87■□□□□ 0.13
RABGGTA-203ENST00000543002 WWTR1Q9GZV5 400 aa15.87■□□□□ 0.13
RABGGTA-203ENST00000543002 CLMPQ9H6B4 373 aa15.87■□□□□ 0.13
RABGGTA-203ENST00000543002 LIN28AQ9H9Z2 209 aaKnown RBP15.87■□□□□ 0.13
RABGGTA-203ENST00000543002 CFL2Q9Y281 166 aa15.87■□□□□ 0.13
RABGGTA-203ENST00000543002 YARS2Q9Y2Z4 477 aaKnown RBP15.87■□□□□ 0.13
RABGGTA-203ENST00000543002 TLN1Q9Y490 2541 aaKnown RBP15.86■□□□□ 0.13
RABGGTA-203ENST00000543002 FAM208BQ5VWN6 2430 aa15.86■□□□□ 0.13
RABGGTA-203ENST00000543002 A0A0G2JND7 137 aa15.86■□□□□ 0.13
RABGGTA-203ENST00000543002 DYTNA2CJ06 578 aa15.86■□□□□ 0.13
RABGGTA-203ENST00000543002 ITGA10O75578 1167 aa15.86■□□□□ 0.13
RABGGTA-203ENST00000543002 WDPCPO95876 746 aa15.86■□□□□ 0.13
RABGGTA-203ENST00000543002 EFNA1P20827 205 aaPredicted RBP15.86■□□□□ 0.13
RABGGTA-203ENST00000543002 IL12AP29459 219 aa15.86■□□□□ 0.13
RABGGTA-203ENST00000543002 MC3RP41968 323 aa15.86■□□□□ 0.13
RABGGTA-203ENST00000543002 KIR3DL1P43629 444 aa15.86■□□□□ 0.13
RABGGTA-203ENST00000543002 CD97P48960 835 aa15.86■□□□□ 0.13
RABGGTA-203ENST00000543002 MRPL19P49406 292 aaKnown RBP15.86■□□□□ 0.13
RABGGTA-203ENST00000543002 SOWAHCQ53LP3 525 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms