RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 TXNDC16Q9P2K2 825 aa14.12□□□□□ -0.15
CLSTN3-213ENST00000541953 NPFFR2Q9Y5X5 522 aa14.12□□□□□ -0.15
CLSTN3-213ENST00000541953 MBD3L4A6NDZ8 208 aaPredicted RBP14.11□□□□□ -0.15
CLSTN3-213ENST00000541953 MBD3L3A6NE82 208 aaPredicted RBP14.11□□□□□ -0.15
CLSTN3-213ENST00000541953 MBD3L5A6NJ08 208 aaPredicted RBP14.11□□□□□ -0.15
CLSTN3-213ENST00000541953 OR6C76A6NM76 312 aa14.11□□□□□ -0.15
CLSTN3-213ENST00000541953 H0YIV9 168 aa14.11□□□□□ -0.15
CLSTN3-213ENST00000541953 CCDC188H7C350 402 aa14.11□□□□□ -0.15
CLSTN3-213ENST00000541953 RAD51CO43502 376 aa14.11□□□□□ -0.15
CLSTN3-213ENST00000541953 DYRK3O43781 588 aa14.11□□□□□ -0.15
CLSTN3-213ENST00000541953 RAF1P04049 648 aa14.11□□□□□ -0.15
CLSTN3-213ENST00000541953 LTA4HP09960 611 aaKnown RBP14.11□□□□□ -0.15
CLSTN3-213ENST00000541953 SLC35E2P0CK97 266 aa14.11□□□□□ -0.15
CLSTN3-213ENST00000541953 EPXP11678 715 aa14.11□□□□□ -0.15
CLSTN3-213ENST00000541953 S1PR1P21453 382 aa14.11□□□□□ -0.15
CLSTN3-213ENST00000541953 PTPN6P29350 595 aa14.11□□□□□ -0.15
CLSTN3-213ENST00000541953 PTGDSP41222 190 aa14.11□□□□□ -0.15
CLSTN3-213ENST00000541953 FUT7Q11130 342 aa14.11□□□□□ -0.15
CLSTN3-213ENST00000541953 SETDB1Q15047 1291 aa14.11□□□□□ -0.15
CLSTN3-213ENST00000541953 PFKFB4Q16877 469 aa14.11□□□□□ -0.15
CLSTN3-213ENST00000541953 TMEM198Q66K66 360 aa14.11□□□□□ -0.15
CLSTN3-213ENST00000541953 MAATS1Q7Z4T9 603 aa14.11□□□□□ -0.15
CLSTN3-213ENST00000541953 GOLGA7Q7Z5G4 137 aa14.11□□□□□ -0.15
CLSTN3-213ENST00000541953 DND1Q8IYX4 353 aaKnown RBP14.11□□□□□ -0.15
CLSTN3-213ENST00000541953 TAGAPQ8N103 731 aa14.11□□□□□ -0.15
CLSTN3-213ENST00000541953 FAM83FQ8NEG4 500 aaPredicted RBP14.11□□□□□ -0.15
CLSTN3-213ENST00000541953 MBD3L2Q8NHZ7 208 aaPredicted RBP14.11□□□□□ -0.15
CLSTN3-213ENST00000541953 NODALQ96S42 347 aa14.11□□□□□ -0.15
CLSTN3-213ENST00000541953 G6PC3Q9BUM1 346 aa14.11□□□□□ -0.15
CLSTN3-213ENST00000541953 NXF5Q9H1B4 397 aaKnown RBP14.11□□□□□ -0.15
CLSTN3-213ENST00000541953 ACTR8Q9H981 624 aa14.11□□□□□ -0.15
CLSTN3-213ENST00000541953 NMRAL1Q9HBL8 299 aa14.11□□□□□ -0.15
CLSTN3-213ENST00000541953 GALNT9Q9HCQ5 603 aa14.11□□□□□ -0.15
CLSTN3-213ENST00000541953 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.11□□□□□ -0.156e-6■□□□□ 8.2
CLSTN3-213ENST00000541953 LYARQ9NX58 379 aaKnown RBP14.11□□□□□ -0.15
CLSTN3-213ENST00000541953 EHD3Q9NZN3 535 aa14.11□□□□□ -0.15
CLSTN3-213ENST00000541953 ZNF629Q9UEG4 869 aaPredicted RBP14.11□□□□□ -0.15
CLSTN3-213ENST00000541953 MTRF1LQ9UGC7 380 aaKnown RBP14.11□□□□□ -0.15
CLSTN3-213ENST00000541953 TSC22D4Q9Y3Q8 395 aa14.11□□□□□ -0.15
CLSTN3-213ENST00000541953 SAR1BQ9Y6B6 198 aa14.11□□□□□ -0.15
CLSTN3-213ENST00000541953 MED12LQ86YW9 2145 aa14.11□□□□□ -0.15
CLSTN3-213ENST00000541953 TUBAL3A6NHL2 446 aa14.1□□□□□ -0.15
CLSTN3-213ENST00000541953 C17orf51A8MQB3 221 aa14.1□□□□□ -0.15
CLSTN3-213ENST00000541953 B4DXG7 233 aa14.1□□□□□ -0.15
CLSTN3-213ENST00000541953 OR7A17O14581 309 aa14.1□□□□□ -0.15
CLSTN3-213ENST00000541953 IL2RAP01589 272 aa14.1□□□□□ -0.15
CLSTN3-213ENST00000541953 HRGP04196 525 aa14.1□□□□□ -0.15
CLSTN3-213ENST00000541953 DRD2P14416 443 aa14.1□□□□□ -0.15
CLSTN3-213ENST00000541953 GPX3P22352 226 aa14.1□□□□□ -0.15
CLSTN3-213ENST00000541953 ABCD3P28288 659 aa14.1□□□□□ -0.15
CLSTN3-213ENST00000541953 TLX1P31314 330 aaPredicted RBP14.1□□□□□ -0.15
CLSTN3-213ENST00000541953 SPRP35270 261 aaPredicted RBP14.1□□□□□ -0.15
CLSTN3-213ENST00000541953 MASP1P48740 699 aa14.1□□□□□ -0.15
CLSTN3-213ENST00000541953 GNG11P61952 73 aa14.1□□□□□ -0.15
CLSTN3-213ENST00000541953 MGAT2Q10469 447 aa14.1□□□□□ -0.15
CLSTN3-213ENST00000541953 TBL3Q12788 808 aaKnown RBP14.1□□□□□ -0.15
CLSTN3-213ENST00000541953 NHSL2Q5HYW2 709 aa14.1□□□□□ -0.15
CLSTN3-213ENST00000541953 GRTP1Q5TC63 336 aa14.1□□□□□ -0.15
CLSTN3-213ENST00000541953 OR52E8Q6IFG1 317 aa14.1□□□□□ -0.15
CLSTN3-213ENST00000541953 FAM111BQ6SJ93 734 aa14.1□□□□□ -0.15
CLSTN3-213ENST00000541953 CYP20A1Q6UW02 462 aa14.1□□□□□ -0.15
CLSTN3-213ENST00000541953 GALNT12Q8IXK2 581 aa14.1□□□□□ -0.15
CLSTN3-213ENST00000541953 VWA5B2Q8N398 1253 aa14.1□□□□□ -0.15
CLSTN3-213ENST00000541953 OR52B6Q8NGF0 335 aa14.1□□□□□ -0.15
CLSTN3-213ENST00000541953 FBF1Q8TES7 1133 aa14.1□□□□□ -0.15
CLSTN3-213ENST00000541953 SLC44A1Q8WWI5 657 aa14.1□□□□□ -0.15
CLSTN3-213ENST00000541953 GPR78Q96P69 363 aa14.1□□□□□ -0.15
CLSTN3-213ENST00000541953 TUBA1CQ9BQE3 449 aa14.1□□□□□ -0.15
CLSTN3-213ENST00000541953 PELOQ9BRX2 385 aaKnown RBP14.1□□□□□ -0.15
CLSTN3-213ENST00000541953 ERP44Q9BS26 406 aa14.1□□□□□ -0.15
CLSTN3-213ENST00000541953 OR10A5Q9H207 317 aa14.1□□□□□ -0.15
CLSTN3-213ENST00000541953 IKBKGQ9Y6K9 419 aa14.1□□□□□ -0.15
CLSTN3-213ENST00000541953 A0A1B0GTL3 188 aa14.09□□□□□ -0.15
CLSTN3-213ENST00000541953 CD8B2A6NJW9 211 aa14.09□□□□□ -0.15
CLSTN3-213ENST00000541953 CLCA1A8K7I4 914 aa14.09□□□□□ -0.15
CLSTN3-213ENST00000541953 TP53I11O14683 189 aa14.09□□□□□ -0.15
CLSTN3-213ENST00000541953 NME6O75414 186 aaPredicted RBP14.09□□□□□ -0.15
CLSTN3-213ENST00000541953 ABCB1P08183 1280 aaPredicted RBP14.09□□□□□ -0.15
CLSTN3-213ENST00000541953 CD53P19397 219 aa14.09□□□□□ -0.15
CLSTN3-213ENST00000541953 CTSSP25774 331 aa14.09□□□□□ -0.15
CLSTN3-213ENST00000541953 PTX3P26022 381 aaPredicted RBP14.09□□□□□ -0.15
CLSTN3-213ENST00000541953 CNTFP26441 200 aa14.09□□□□□ -0.15
CLSTN3-213ENST00000541953 HOXC12P31275 282 aa14.09□□□□□ -0.15
CLSTN3-213ENST00000541953 GALNSP34059 522 aa14.09□□□□□ -0.15
CLSTN3-213ENST00000541953 LTBQ06643 244 aa14.09□□□□□ -0.15
CLSTN3-213ENST00000541953 C2orf54Q08AI8 447 aa14.09□□□□□ -0.15
CLSTN3-213ENST00000541953 BIKQ13323 160 aa14.09□□□□□ -0.15
CLSTN3-213ENST00000541953 CUL3Q13618 768 aa14.09□□□□□ -0.15
CLSTN3-213ENST00000541953 GTF2H2Q13888 395 aa14.09□□□□□ -0.15
CLSTN3-213ENST00000541953 EXOSC7Q15024 291 aaKnown RBP14.09□□□□□ -0.15
CLSTN3-213ENST00000541953 TOMM20Q15388 145 aa14.09□□□□□ -0.15
CLSTN3-213ENST00000541953 TBCELQ5QJ74 424 aa14.09□□□□□ -0.15
CLSTN3-213ENST00000541953 LIPJQ5W064 366 aa14.09□□□□□ -0.15
CLSTN3-213ENST00000541953 TIGD3Q6B0B8 471 aa14.09□□□□□ -0.15
CLSTN3-213ENST00000541953 FAM180BQ6P0A1 224 aa14.09□□□□□ -0.15
CLSTN3-213ENST00000541953 GTF2H2CQ6P1K8 395 aa14.09□□□□□ -0.15
CLSTN3-213ENST00000541953 ZDHHC24Q6UX98 284 aa14.09□□□□□ -0.15
CLSTN3-213ENST00000541953 ANGPTL8Q6UXH0 198 aa14.09□□□□□ -0.15
CLSTN3-213ENST00000541953 CYS1Q717R9 158 aa14.09□□□□□ -0.15
CLSTN3-213ENST00000541953 RPS27LQ71UM5 84 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms