RNA–Protein interactions for RNA: ENST00000541841.1

CIT-211, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-211ENST00000541841 CHI3L1P36222 383 aaPredicted RBP4.62□□□□□ -1.67
CIT-211ENST00000541841 LIMK2P53671 638 aa4.62□□□□□ -1.67
CIT-211ENST00000541841 PRRX1P54821 245 aa4.62□□□□□ -1.67
CIT-211ENST00000541841 VCPP55072 806 aaKnown RBP4.62□□□□□ -1.67
CIT-211ENST00000541841 MLLT10P55197 1068 aa4.62□□□□□ -1.67
CIT-211ENST00000541841 SH3BGRP55822 239 aaPredicted RBP4.62□□□□□ -1.67
CIT-211ENST00000541841 PITX1P78337 314 aaPredicted RBP4.62□□□□□ -1.67
CIT-211ENST00000541841 CBX1P83916 185 aa4.62□□□□□ -1.67
CIT-211ENST00000541841 GABPAQ06546 454 aa4.62□□□□□ -1.67
CIT-211ENST00000541841 IFT88Q13099 833 aa4.62□□□□□ -1.67
CIT-211ENST00000541841 NME3Q13232 169 aa4.62□□□□□ -1.67
CIT-211ENST00000541841 GPR50Q13585 617 aa4.62□□□□□ -1.67
CIT-211ENST00000541841 RBM39Q14498 530 aaKnown RBP4.62□□□□□ -1.67
CIT-211ENST00000541841 SQLEQ14534 574 aa4.62□□□□□ -1.67
CIT-211ENST00000541841 CAMK4Q16566 473 aa4.62□□□□□ -1.67
CIT-211ENST00000541841 CT45A2Q5DJT8 189 aa4.62□□□□□ -1.67
CIT-211ENST00000541841 SLC35D3Q5M8T2 416 aa4.62□□□□□ -1.67
CIT-211ENST00000541841 TRNP1Q6NT89 227 aa4.62□□□□□ -1.67
CIT-211ENST00000541841 SLC27A4Q6P1M0 643 aa4.62□□□□□ -1.67
CIT-211ENST00000541841 NIPAL3Q6P499 406 aa4.62□□□□□ -1.67
CIT-211ENST00000541841 SLC39A4Q6P5W5 647 aa4.62□□□□□ -1.67
CIT-211ENST00000541841 LRRC8BQ6P9F7 803 aa4.62□□□□□ -1.67
CIT-211ENST00000541841 BLOC1S2Q6QNY1 142 aa4.62□□□□□ -1.67
CIT-211ENST00000541841 PAQR9Q6ZVX9 377 aa4.62□□□□□ -1.67
CIT-211ENST00000541841 RUFY3Q7L099 469 aa4.62□□□□□ -1.67
CIT-211ENST00000541841 ZNF771Q7L3S4 317 aaPredicted RBP4.62□□□□□ -1.67
CIT-211ENST00000541841 SLC22A16Q86VW1 577 aa4.62□□□□□ -1.67
CIT-211ENST00000541841 FAM131BQ86XD5 332 aa4.62□□□□□ -1.67
CIT-211ENST00000541841 ITPRIPQ8IWB1 547 aa4.62□□□□□ -1.67
CIT-211ENST00000541841 DCLK2Q8N568 766 aa4.62□□□□□ -1.67
CIT-211ENST00000541841 ZNF114Q8NC26 417 aa4.62□□□□□ -1.67
CIT-211ENST00000541841 BHLHE23Q8NDY6 225 aa4.62□□□□□ -1.67
CIT-211ENST00000541841 OR6M1Q8NGM8 313 aa4.62□□□□□ -1.67
CIT-211ENST00000541841 OR52N5Q8NH56 324 aa4.62□□□□□ -1.67
CIT-211ENST00000541841 SLC35C1Q96A29 364 aa4.62□□□□□ -1.67
CIT-211ENST00000541841 ABHD8Q96I13 439 aa4.62□□□□□ -1.67
CIT-211ENST00000541841 TPD52L3Q96J77 140 aa4.62□□□□□ -1.67
CIT-211ENST00000541841 PIWIL1Q96J94 861 aaKnown RBP4.62□□□□□ -1.67
CIT-211ENST00000541841 VPS35Q96QK1 796 aa4.62□□□□□ -1.67
CIT-211ENST00000541841 S1PR3Q99500 378 aa4.62□□□□□ -1.67
CIT-211ENST00000541841 LRRCC1Q9C099 1032 aa4.62□□□□□ -1.67
CIT-211ENST00000541841 SHARPINQ9H0F6 387 aa4.62□□□□□ -1.67
CIT-211ENST00000541841 MAGT1Q9H0U3 335 aa4.62□□□□□ -1.67
CIT-211ENST00000541841 SLC26A1Q9H2B4 701 aa4.62□□□□□ -1.67
CIT-211ENST00000541841 COG4Q9H9E3 785 aa4.62□□□□□ -1.67
CIT-211ENST00000541841 CHST11Q9NPF2 352 aa4.62□□□□□ -1.67
CIT-211ENST00000541841 SDR39U1Q9NRG7 319 aaPredicted RBP4.62□□□□□ -1.67
CIT-211ENST00000541841 RNF186Q9NXI6 227 aa4.62□□□□□ -1.67
CIT-211ENST00000541841 PLEK2Q9NYT0 353 aa4.62□□□□□ -1.67
CIT-211ENST00000541841 LHX3Q9UBR4 397 aa4.62□□□□□ -1.67
CIT-211ENST00000541841 DIMT1Q9UNQ2 313 aaKnown RBP4.62□□□□□ -1.67
CIT-211ENST00000541841 RTEL1-TNFRSF6BF6WH68 1400 aa4.62□□□□□ -1.67
CIT-211ENST00000541841 NPHP4O75161 1426 aaPredicted RBP4.62□□□□□ -1.67
CIT-211ENST00000541841 INO80Q9ULG1 1556 aaPredicted RBP4.61□□□□□ -1.67
CIT-211ENST00000541841 ZC3H13Q5T200 1668 aaKnown RBP4.61□□□□□ -1.67
CIT-211ENST00000541841 QRICH2Q9H0J4 1663 aa4.61□□□□□ -1.67
CIT-211ENST00000541841 IFT172Q9UG01 1749 aa4.61□□□□□ -1.67
CIT-211ENST00000541841 ANKRD26Q9UPS8 1709 aa4.61□□□□□ -1.67
CIT-211ENST00000541841 ARPC4-TTLL3A0A0A6YYG9 625 aa4.61□□□□□ -1.67
CIT-211ENST00000541841 TRBV5-5A0A0J9YX44 114 aa4.61□□□□□ -1.67
CIT-211ENST00000541841 MTMR11A4FU01 709 aa4.61□□□□□ -1.67
CIT-211ENST00000541841 GOLGA8OA6NCC3 632 aa4.61□□□□□ -1.67
CIT-211ENST00000541841 ZNF716A6NP11 495 aa4.61□□□□□ -1.67
CIT-211ENST00000541841 GOLGA8NF8WBI6 632 aa4.61□□□□□ -1.67
CIT-211ENST00000541841 ZNF208O43345 1280 aa4.61□□□□□ -1.67
CIT-211ENST00000541841 CIB2O75838 187 aa4.61□□□□□ -1.67
CIT-211ENST00000541841 ATP1B1P05026 303 aa4.61□□□□□ -1.67
CIT-211ENST00000541841 ZNF735P0CB33 412 aa4.61□□□□□ -1.67
CIT-211ENST00000541841 GALP22466 123 aa4.61□□□□□ -1.67
CIT-211ENST00000541841 UQCRC2P22695 453 aa4.61□□□□□ -1.67
CIT-211ENST00000541841 TRIM23P36406 574 aa4.61□□□□□ -1.67
CIT-211ENST00000541841 NPY2RP49146 381 aa4.61□□□□□ -1.67
CIT-211ENST00000541841 ACADVLP49748 655 aa4.61□□□□□ -1.67
CIT-211ENST00000541841 SNTA1Q13424 505 aa4.61□□□□□ -1.67
CIT-211ENST00000541841 ITGA9Q13797 1035 aa4.61□□□□□ -1.67
CIT-211ENST00000541841 IDI1Q13907 227 aa4.61□□□□□ -1.67
CIT-211ENST00000541841 SELPLGQ14242 412 aa4.61□□□□□ -1.67
CIT-211ENST00000541841 TMEM132DQ14C87 1099 aa4.61□□□□□ -1.67
CIT-211ENST00000541841 CALCRLQ16602 461 aa4.61□□□□□ -1.67
CIT-211ENST00000541841 CLPPQ16740 277 aaPredicted RBP4.61□□□□□ -1.67
CIT-211ENST00000541841 MPPE1Q53F39 396 aa4.61□□□□□ -1.67
CIT-211ENST00000541841 SLC25A53Q5H9E4 307 aa4.61□□□□□ -1.67
CIT-211ENST00000541841 PHYHD1Q5SRE7 291 aa4.61□□□□□ -1.67
CIT-211ENST00000541841 ATF7IP2Q5U623 682 aa4.61□□□□□ -1.67
CIT-211ENST00000541841 RTL6Q6ICC9 239 aa4.61□□□□□ -1.67
CIT-211ENST00000541841 CAPN13Q6MZZ7 669 aaPredicted RBP4.61□□□□□ -1.67
CIT-211ENST00000541841 CDC42EP5Q6NZY7 148 aa4.61□□□□□ -1.67
CIT-211ENST00000541841 EFL1Q7Z2Z2 1120 aaKnown RBP4.61□□□□□ -1.67
CIT-211ENST00000541841 WDR49Q8IV35 697 aa4.61□□□□□ -1.67
CIT-211ENST00000541841 UBQLNLQ8IYU4 475 aa4.61□□□□□ -1.67
CIT-211ENST00000541841 TTC5Q8N0Z6 440 aa4.61□□□□□ -1.67
CIT-211ENST00000541841 PDCL2Q8N4E4 241 aa4.61□□□□□ -1.67
CIT-211ENST00000541841 CCDC197Q8NCU1 140 aa4.61□□□□□ -1.67
CIT-211ENST00000541841 GPR148Q8TDV2 347 aa4.61□□□□□ -1.67
CIT-211ENST00000541841 GIPC3Q8TF64 312 aa4.61□□□□□ -1.67
CIT-211ENST00000541841 RLN3Q8WXF3 142 aa4.61□□□□□ -1.67
CIT-211ENST00000541841 HSD17B8Q92506 261 aa4.61□□□□□ -1.67
CIT-211ENST00000541841 SUSD6Q92537 303 aa4.61□□□□□ -1.67
CIT-211ENST00000541841 NXPE2Q96DL1 559 aa4.61□□□□□ -1.67
CIT-211ENST00000541841 SLC41A3Q96GZ6 507 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms