RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 NPY2RP49146 381 aa8.49□□□□□ -1.05
YBX3-211ENST00000541351 NEK2P51955 445 aa8.49□□□□□ -1.05
YBX3-211ENST00000541351 GFRA1P56159 465 aa8.49□□□□□ -1.05
YBX3-211ENST00000541351 CLDN18P56856 261 aa8.49□□□□□ -1.05
YBX3-211ENST00000541351 HILS1P60008 231 aa8.49□□□□□ -1.05
YBX3-211ENST00000541351 COPS2P61201 443 aa8.49□□□□□ -1.05
YBX3-211ENST00000541351 IRX1P78414 480 aaPredicted RBP8.49□□□□□ -1.05
YBX3-211ENST00000541351 CHRNB3Q05901 458 aa8.49□□□□□ -1.05
YBX3-211ENST00000541351 RBBP5Q15291 538 aaKnown RBP8.49□□□□□ -1.05
YBX3-211ENST00000541351 FNDC7Q5VTL7 733 aa8.49□□□□□ -1.05
YBX3-211ENST00000541351 TMEM81Q6P7N7 255 aa8.49□□□□□ -1.05
YBX3-211ENST00000541351 SBSNQ6UWP8 590 aa8.49□□□□□ -1.05
YBX3-211ENST00000541351 KATNAL2Q8IYT4 538 aa8.49□□□□□ -1.05
YBX3-211ENST00000541351 SNX31Q8N9S9 440 aa8.49□□□□□ -1.05
YBX3-211ENST00000541351 OR52K1Q8NGK4 314 aa8.49□□□□□ -1.05
YBX3-211ENST00000541351 SLC35G2Q8TBE7 412 aa8.49□□□□□ -1.05
YBX3-211ENST00000541351 C3orf49Q96BT1 292 aa8.49□□□□□ -1.05
YBX3-211ENST00000541351 FAM136AQ96C01 138 aa8.49□□□□□ -1.05
YBX3-211ENST00000541351 PYCR2Q96C36 320 aa8.49□□□□□ -1.05
YBX3-211ENST00000541351 SNF8Q96H20 258 aa8.49□□□□□ -1.05
YBX3-211ENST00000541351 BIRC8Q96P09 236 aa8.49□□□□□ -1.05
YBX3-211ENST00000541351 WWTR1Q9GZV5 400 aa8.49□□□□□ -1.05
YBX3-211ENST00000541351 NUP62CLQ9H1M0 184 aa8.49□□□□□ -1.05
YBX3-211ENST00000541351 METTL17Q9H7H0 456 aaPredicted RBP8.49□□□□□ -1.05
YBX3-211ENST00000541351 ARL15Q9NXU5 204 aa8.49□□□□□ -1.05
YBX3-211ENST00000541351 STOML1Q9UBI4 398 aa8.49□□□□□ -1.05
YBX3-211ENST00000541351 DAPP1Q9UN19 280 aa8.49□□□□□ -1.05
YBX3-211ENST00000541351 EXO1Q9UQ84 846 aaKnown RBP8.49□□□□□ -1.05
YBX3-211ENST00000541351 EFR3BQ9Y2G0 817 aa8.49□□□□□ -1.05
YBX3-211ENST00000541351 CRYL1Q9Y2S2 319 aa8.49□□□□□ -1.05
YBX3-211ENST00000541351 MRPS18CQ9Y3D5 142 aaKnown RBP8.49□□□□□ -1.05
YBX3-211ENST00000541351 DYRK1BQ9Y463 629 aa8.49□□□□□ -1.05
YBX3-211ENST00000541351 PTGDR2Q9Y5Y4 395 aa8.49□□□□□ -1.05
YBX3-211ENST00000541351 C2orf92A0A1B0GVN3 265 aa8.48□□□□□ -1.05
YBX3-211ENST00000541351 E7EVH7 732 aa8.48□□□□□ -1.05
YBX3-211ENST00000541351 AP3B1O00203 1094 aa8.48□□□□□ -1.05
YBX3-211ENST00000541351 CYR61O00622 381 aa8.48□□□□□ -1.05
YBX3-211ENST00000541351 ETHE1O95571 254 aa8.48□□□□□ -1.05
YBX3-211ENST00000541351 ZNF23P17027 643 aa8.48□□□□□ -1.05
YBX3-211ENST00000541351 IL32P24001 234 aa8.48□□□□□ -1.05
YBX3-211ENST00000541351 ADH6P28332 368 aa8.48□□□□□ -1.05
YBX3-211ENST00000541351 SRD5A2P31213 254 aa8.48□□□□□ -1.05
YBX3-211ENST00000541351 RBMXP38159 391 aaKnown RBP8.48□□□□□ -1.05
YBX3-211ENST00000541351 STT3AP46977 705 aa8.48□□□□□ -1.05
YBX3-211ENST00000541351 RGS4P49798 205 aa8.48□□□□□ -1.05
YBX3-211ENST00000541351 LIM2P55344 173 aa8.48□□□□□ -1.05
YBX3-211ENST00000541351 FBXW4P57775 412 aa8.48□□□□□ -1.05
YBX3-211ENST00000541351 BSPH1Q075Z2 132 aa8.48□□□□□ -1.05
YBX3-211ENST00000541351 RUNX2Q13950 521 aa8.48□□□□□ -1.05
YBX3-211ENST00000541351 DUPD1Q68J44 220 aa8.48□□□□□ -1.05
YBX3-211ENST00000541351 KLHDC8AQ8IYD2 350 aa8.48□□□□□ -1.05
YBX3-211ENST00000541351 LINC01356Q8N9X3 169 aa8.48□□□□□ -1.05
YBX3-211ENST00000541351 SRFBP1Q8NEF9 429 aaKnown RBP8.48□□□□□ -1.05
YBX3-211ENST00000541351 KBTBD8Q8NFY9 601 aa8.48□□□□□ -1.05
YBX3-211ENST00000541351 SLC5A11Q8WWX8 675 aa8.48□□□□□ -1.05
YBX3-211ENST00000541351 LPGAT1Q92604 370 aa8.48□□□□□ -1.05
YBX3-211ENST00000541351 KRT35Q92764 455 aa8.48□□□□□ -1.05
YBX3-211ENST00000541351 HPS1Q92902 700 aa8.48□□□□□ -1.05
YBX3-211ENST00000541351 PRR14Q9BWN1 585 aa8.48□□□□□ -1.05
YBX3-211ENST00000541351 OSBPL11Q9BXB4 747 aa8.48□□□□□ -1.05
YBX3-211ENST00000541351 TRIM54Q9BYV2 358 aa8.48□□□□□ -1.05
YBX3-211ENST00000541351 PRRG4Q9BZD6 226 aa8.48□□□□□ -1.05
YBX3-211ENST00000541351 C10orf88Q9H8K7 445 aa8.48□□□□□ -1.05
YBX3-211ENST00000541351 PELI2Q9HAT8 420 aa8.48□□□□□ -1.05
YBX3-211ENST00000541351 PARVBQ9HBI1 364 aa8.48□□□□□ -1.05
YBX3-211ENST00000541351 GLRX2Q9NS18 164 aa8.48□□□□□ -1.05
YBX3-211ENST00000541351 KLRF1Q9NZS2 232 aa8.48□□□□□ -1.05
YBX3-211ENST00000541351 MARCH4Q9P2E8 410 aaPredicted RBP8.48□□□□□ -1.05
YBX3-211ENST00000541351 DKKL1Q9UK85 242 aa8.48□□□□□ -1.05
YBX3-211ENST00000541351 MGAT4BQ9UQ53 548 aa8.48□□□□□ -1.05
YBX3-211ENST00000541351 ALPK2Q86TB3 2170 aa8.48□□□□□ -1.05
YBX3-211ENST00000541351 LOC390937A0A1W2PQ73 354 aa8.47□□□□□ -1.05
YBX3-211ENST00000541351 TTKP33981 857 aa8.47□□□□□ -1.05
YBX3-211ENST00000541351 STARP49675 285 aa8.47□□□□□ -1.05
YBX3-211ENST00000541351 HNRNPFP52597 415 aaKnown RBP8.47□□□□□ -1.05
YBX3-211ENST00000541351 RPS13P62277 151 aaKnown RBP8.47□□□□□ -1.05
YBX3-211ENST00000541351 REEP5Q00765 189 aa8.47□□□□□ -1.05
YBX3-211ENST00000541351 EBPQ15125 230 aaKnown RBP8.47□□□□□ -1.05
YBX3-211ENST00000541351 PCID2Q5JVF3 399 aa8.47□□□□□ -1.05
YBX3-211ENST00000541351 BICRALQ6AI39 1079 aa8.47□□□□□ -1.05
YBX3-211ENST00000541351 RINLQ6ZS11 566 aa8.47□□□□□ -1.05
YBX3-211ENST00000541351 CCDC25Q86WR0 208 aa8.47□□□□□ -1.05
YBX3-211ENST00000541351 MUC15Q8N387 334 aa8.47□□□□□ -1.05
YBX3-211ENST00000541351 TMEM52Q8NDY8 209 aa8.47□□□□□ -1.05
YBX3-211ENST00000541351 OR2L5Q8NG80 312 aa8.47□□□□□ -1.05
YBX3-211ENST00000541351 CCT6BQ92526 530 aa8.47□□□□□ -1.05
YBX3-211ENST00000541351 KCNJ9Q92806 393 aa8.47□□□□□ -1.05
YBX3-211ENST00000541351 GMPPAQ96IJ6 420 aaPredicted RBP8.47□□□□□ -1.05
YBX3-211ENST00000541351 SUCNR1Q9BXA5 334 aa8.47□□□□□ -1.05
YBX3-211ENST00000541351 HEMGNQ9BXL5 484 aa8.47□□□□□ -1.05
YBX3-211ENST00000541351 PINK1Q9BXM7 581 aa8.47□□□□□ -1.05
YBX3-211ENST00000541351 KLHL31Q9H511 634 aa8.47□□□□□ -1.05
YBX3-211ENST00000541351 LYRM4Q9HD34 91 aa8.47□□□□□ -1.05
YBX3-211ENST00000541351 SERHLQ9NQF3 203 aa8.47□□□□□ -1.05
YBX3-211ENST00000541351 HEY2Q9UBP5 337 aa8.47□□□□□ -1.05
YBX3-211ENST00000541351 POU2F3Q9UKI9 436 aa8.47□□□□□ -1.05
YBX3-211ENST00000541351 IKZF3Q9UKT9 509 aa8.47□□□□□ -1.05
YBX3-211ENST00000541351 COMMD10Q9Y6G5 202 aa8.47□□□□□ -1.05
YBX3-211ENST00000541351 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.47□□□□□ -1.05
YBX3-211ENST00000541351 CADP27708 2225 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms