RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 Q8N402 240 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 OR4K5Q8NGD3 323 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 OR8D4Q8NGM9 314 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 GOT1L1Q8NHS2 421 aaPredicted RBP9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 BTN2A2Q8WVV5 523 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 POP5Q969H6 163 aaKnown RBP9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 DHRS1Q96LJ7 313 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 TREX2Q9BQ50 279 aaPredicted RBP9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 SPATA9Q9BWV2 254 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 CDCP1Q9H5V8 836 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 KCND3Q9UK17 655 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 SNRNP200O75643 2136 aaKnown RBP9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 DENND4CQ5VZ89 1909 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 SYNDIG1LA6NDD5 238 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 C12orf71A8MTZ7 269 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 LANCL1O43813 399 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 PLOD3O60568 738 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 ATG13O75143 517 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 EPPINO95925 133 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 RPLP2P05387 115 aaKnown RBP9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 C8orf89P0DMQ9 161 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 C1GALT1C1LP0DN25 315 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 AGFG1P52594 562 aaKnown RBP9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 PDE7AQ13946 482 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 C12orf73Q69YU5 71 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 KIAA1161Q6NSJ0 714 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 OR5H6Q8NGV6 325 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 GLYATL1Q969I3 302 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 TBX5Q99593 518 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 RETREG1Q9H6L5 497 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 TDP1Q9NUW8 608 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 HCN2Q9UL51 889 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 A4GNTQ9UNA3 340 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 HS3ST2Q9Y278 367 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 GRIP1Q9Y3R0 1128 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 DYRK1BQ9Y463 629 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 HSPB11Q9Y547 144 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 PRUNE2Q8WUY3 3088 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 THSD7BQ9C0I4 1608 aa9.8□□□□□ -0.84
CDC42SE1-207ENST00000540998 SERTM1A2A2V5 107 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 FAM183AA6NL82 134 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 ISM1B1AKI9 464 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 KPNA3O00505 521 aaPredicted RBP9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 ALX3O95076 343 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 ADAP00813 363 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 YES1P07947 543 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 SLC2A2P11168 524 aaPredicted RBP9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 HOXB3P14651 431 aaPredicted RBP9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 BUD31P41223 144 aaPredicted RBP9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 SLC6A11P48066 632 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 ILKQ13418 452 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 QPRTQ15274 297 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 GPR19Q15760 415 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 CLPPQ16740 277 aaPredicted RBP9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 FAM27D1Q5T7N8 215 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 DDI2Q5TDH0 399 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 MTFR2Q6P444 385 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 RASGRP3Q8IV61 690 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 RDH10Q8IZV5 341 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 ANKRD53Q8N9V6 530 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 TMEM145Q8NBT3 493 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 RNFT2Q96EX2 444 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 MAN2C1Q9NTJ4 1040 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 ACOXLQ9NUZ1 547 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 MOSPD1Q9UJG1 213 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 RPL36Q9Y3U8 105 aaKnown RBP9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 KCNE3Q9Y6H6 103 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 CCL16O15467 120 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 LATO43561 262 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 TMPRSS11DO60235 418 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 DDX5P17844 614 aaKnown RBP9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 FUT1P19526 365 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 CELP19835 753 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 POU3F3P20264 500 aaPredicted RBP9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 XPAP23025 273 aaPredicted RBP9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 MAPK12P53778 367 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 WDR5P61964 334 aaKnown RBP9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 ASAH1Q13510 395 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 C1DQ13901 141 aaKnown RBP9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 ZNF284Q2VY69 593 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 SLC30A6Q6NXT4 461 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 PLET1Q6UQ28 207 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 LAPTM4BQ86VI4 370 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 OR8J1Q8NGP2 316 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 SLC5A11Q8WWX8 675 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 PDXPQ96GD0 296 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 TRMT2BQ96GJ1 504 aaKnown RBP9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 LMLNQ96KR4 655 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 EQTNQ9NQ60 294 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 NPAP1Q9NZP6 1156 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 TAC3Q9UHF0 121 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 OBSL1O75147 1896 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 ZNF197O14709 1029 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 ZNF780AO75290 641 aaPredicted RBP9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 PAHP00439 452 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 ELFN1P0C7U0 828 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 ALAS2P22557 587 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 ITGB7P26010 798 aa9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 CST5P28325 142 aaPredicted RBP9.79□□□□□ -0.84
CDC42SE1-207ENST00000540998 VIPR1P32241 457 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms