RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 PTGER3P43115 390 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 CLCNKAP51800 687 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 CDH4P55283 916 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 CDC42P60953 191 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 TNK1Q13470 666 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 TEAD4Q15561 434 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 SSX1Q16384 188 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 DDI2Q5TDH0 399 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 PLET1Q6UQ28 207 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 Q6ZVL8 140 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 TAS1R1Q7RTX1 841 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 FGD2Q7Z6J4 655 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 LNX2Q8N448 690 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 TMEM145Q8NBT3 493 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 MDGA1Q8NFP4 955 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 VANGL1Q8TAA9 524 aaPredicted RBP4.98□□□□□ -1.61
PROM1-220ENST00000540805 CHTF18Q8WVB6 975 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 ARMC5Q96C12 935 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 FUBP3Q96I24 572 aaKnown RBP eCLIP4.98□□□□□ -1.61
PROM1-220ENST00000540805 DPH2Q9BQC3 489 aaPredicted RBP4.98□□□□□ -1.61
PROM1-220ENST00000540805 FAIM2Q9BWQ8 316 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 CDCA4Q9BXL8 241 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 SLC29A3Q9BZD2 475 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 BARHL1Q9BZE3 327 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 MAGEH1Q9H213 219 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 SRMSQ9H3Y6 488 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 ZCCHC4Q9H5U6 513 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 SGK2Q9HBY8 427 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 KLHL1Q9NR64 748 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 CNOT2Q9NZN8 540 aaKnown RBP4.98□□□□□ -1.61
PROM1-220ENST00000540805 PPT2Q9UMR5 302 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 DHRS7Q9Y394 339 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 ZNF106Q9H2Y7 1883 aaKnown RBP4.98□□□□□ -1.61
PROM1-220ENST00000540805 ALPK3Q96L96 1907 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 ROS1P08922 2347 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.98□□□□□ -1.61
PROM1-220ENST00000540805 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.98□□□□□ -1.61
PROM1-220ENST00000540805 MTMR11A4FU01 709 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 OR5K3A6NET4 321 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 OR5K4A6NMS3 321 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 LINC00587B1AMM8 73 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 LOC730098B7Z3J9 87 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 TAPBPO15533 448 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 STK16O75716 305 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 KCNK5O95279 499 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 HIST1H2ABP04908 130 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 GABRB1P18505 474 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 GDF5P43026 501 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 KIR3DL1P43629 444 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 ARRB1P49407 418 aaPredicted RBP4.98□□□□□ -1.61
PROM1-220ENST00000540805 STK19P49842 368 aaPredicted RBP4.98□□□□□ -1.61
PROM1-220ENST00000540805 ERVFC1P60507 584 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 SPIBQ01892 262 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 ZNF33BQ06732 778 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 GPR17Q13304 367 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 NFATC2Q13469 925 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 TAF13Q15543 124 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 C21orf62-AS1Q17RA5 79 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 DUOXA1Q1HG43 343 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 C5orf22Q49AR2 442 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 SLC35F1Q5T1Q4 408 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 ZNF600Q6ZNG1 722 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 GDPGP1Q6ZNW5 385 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 CREB3L2Q70SY1 520 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 HIST3H2AQ7L7L0 130 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 PTOV1Q86YD1 416 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 SLC5A8Q8N695 610 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 GDPD1Q8N9F7 314 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 FAM181AQ8N9Y4 354 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 AKAP1Q92667 903 aaKnown RBP eCLIP4.98□□□□□ -1.61
PROM1-220ENST00000540805 HIST1H2ACQ93077 130 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 IGSF8Q969P0 613 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 RAD51AP1Q96B01 352 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 TIFAQ96CG3 184 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 TMEM80Q96HE8 168 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 C7orf34Q96L11 122 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 C5orf34Q96MH7 638 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 OPALINQ96PE5 141 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 RIOK2Q9BVS4 552 aaKnown RBP4.98□□□□□ -1.61
PROM1-220ENST00000540805 TAPBPLQ9BX59 468 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 ACPTQ9BZG2 426 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 CD244Q9BZW8 370 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 TINAGL1Q9GZM7 467 aaPredicted RBP4.98□□□□□ -1.61
PROM1-220ENST00000540805 PPIL3Q9H2H8 161 aaKnown RBP4.98□□□□□ -1.61
PROM1-220ENST00000540805 MTG2Q9H4K7 406 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 ADAP2Q9NPF8 381 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 PAK6Q9NQU5 681 aaPredicted RBP4.98□□□□□ -1.61
PROM1-220ENST00000540805 ING3Q9NXR8 418 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 SEC14L4Q9UDX3 406 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 NUP50Q9UKX7 468 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 OARD1Q9Y530 152 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 SCN8AQ9UQD0 1980 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 COL6A6A6NMZ7 2263 aa4.98□□□□□ -1.61
PROM1-220ENST00000540805 IQCMA0A1B0GVH7 501 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 FABP12A6NFH5 140 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 URADA6NGE7 173 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 MAGEB17A8MXT2 336 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 GNB5O14775 395 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 CCNB2O95067 398 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 IGLV3-27P01718 113 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms