RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 ZNF461Q8TAF7 563 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 TCTEX1D2Q8WW35 142 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 WNT2BQ93097 391 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 TUBB1Q9H4B7 451 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 MAGIXQ9H6Y5 334 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 KLHL9Q9P2J3 617 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 ZSWIM8A7E2V4 1837 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 ZNF236Q9UL36 1845 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 IGLV3-22A0A075B6J6 115 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 A0A0A0MRY4 1105 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 ACOD1A6NK06 481 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 MCRIP1C9JLW8 97 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 SSNA1O43805 119 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 IGHV2-5P01817 119 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 HEXAP06865 529 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 SAGP10523 405 aaPredicted RBP8.99□□□□□ -0.97
CLIP1-214ENST00000540539 MAPTP10636 758 aaKnown RBP8.99□□□□□ -0.97
CLIP1-214ENST00000540539 SMPD1P17405 629 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 ITGB5P18084 799 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 SDHBP21912 280 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 CTGFP29279 349 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 VIPR1P32241 457 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 CSF2RBP32927 897 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 CD96P40200 585 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 FOXA1P55317 472 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 SNRPFP62306 86 aaKnown RBP8.99□□□□□ -0.97
CLIP1-214ENST00000540539 PPP3R1P63098 170 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 DOC2AQ14183 400 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 MELKQ14680 651 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 SPIN4Q56A73 249 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 TECRLQ5HYJ1 363 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 COLGALT1Q8NBJ5 622 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 RELL2Q8NC24 303 aaPredicted RBP8.99□□□□□ -0.97
CLIP1-214ENST00000540539 B3GNT7Q8NFL0 401 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 HSD17B8Q92506 261 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 GCDHQ92947 438 aaPredicted RBP8.99□□□□□ -0.97
CLIP1-214ENST00000540539 TCEAL4Q96EI5 215 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 SPATA13Q96N96 652 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 TMEM209Q96SK2 561 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 CDCA4Q9BXL8 241 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 ARHGAP39Q9C0H5 1083 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 ABCG5Q9H222 651 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 TCF7L1Q9HCS4 588 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 PDLIM7Q9NR12 457 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 EIF2B3Q9NR50 452 aaKnown RBP8.99□□□□□ -0.97
CLIP1-214ENST00000540539 DCAF13Q9NV06 445 aaKnown RBP8.99□□□□□ -0.97
CLIP1-214ENST00000540539 GFOD1Q9NXC2 390 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 CFAP20Q9Y6A4 193 aaKnown RBP8.99□□□□□ -0.97
CLIP1-214ENST00000540539 A0A087X0M5 115 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 A0A1B0GX30 115 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 A8MVJ9 347 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 CXCR6O00574 342 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 RRP8O43159 456 aaKnown RBP8.98□□□□□ -0.97
CLIP1-214ENST00000540539 LANCL1O43813 399 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 UGDHO60701 494 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 CRTAPO75718 401 aaPredicted RBP8.98□□□□□ -0.97
CLIP1-214ENST00000540539 KRT33AO76009 404 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 MLYCDO95822 493 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 LINC00032P0C843 101 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 DRD2P14416 443 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 SDHAP31040 664 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 CTBP2P56545 445 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 SH3BP2P78314 561 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 SP3Q02447 781 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 TRAM1Q15629 374 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 MORN1Q5T089 497 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 GPRC6AQ5T6X5 926 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 MEDAGQ5VYS4 303 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 CASP12Q6UXS9 341 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 SLC29A4Q7RTT9 530 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 OR52K1Q8NGK4 314 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 OR10K1Q8NGX5 313 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 S100PBPQ96BU1 408 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 CHFRQ96EP1 664 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 CHIAQ9BZP6 476 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 SIK2Q9H0K1 926 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 HDHD2Q9H0R4 259 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 KLHL31Q9H511 634 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 MINDY3Q9H8M7 445 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 BARX1Q9HBU1 254 aaPredicted RBP8.98□□□□□ -0.97
CLIP1-214ENST00000540539 PTPRHQ9HD43 1115 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 DUSP22Q9NRW4 184 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 C19orf12Q9NSK7 152 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 AIG1Q9NVV5 245 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 GAB2Q9UQC2 676 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 RUVBL1Q9Y265 456 aaKnown RBP8.98□□□□□ -0.97
CLIP1-214ENST00000540539 NUBP2Q9Y5Y2 271 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 UBIAD1Q9Y5Z9 338 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 COLCA2A8K830 154 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 I6L893 689 aaPredicted RBP8.98□□□□□ -0.97
CLIP1-214ENST00000540539 F2P00734 622 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 NFYAP23511 347 aaPredicted RBP8.98□□□□□ -0.97
CLIP1-214ENST00000540539 EDNRBP24530 442 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 PSMB4P28070 264 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 S100A11P31949 105 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 CTSOP43234 321 aaPredicted RBP8.98□□□□□ -0.97
CLIP1-214ENST00000540539 NPBWR1P48145 328 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 HTRA4P83105 476 aaPredicted RBP8.98□□□□□ -0.97
CLIP1-214ENST00000540539 MAP4K2Q12851 820 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 OR8G1Q15617 311 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms