RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 PRKAA2P54646 552 aa19.29■□□□□ 0.68
CHFR-217ENST00000540537 SRRM1Q8IYB3 904 aaKnown RBP19.29■□□□□ 0.68
CHFR-217ENST00000540537 C1orf52Q8N6N3 182 aaKnown RBP19.29■□□□□ 0.68
CHFR-217ENST00000540537 MZB1Q8WU39 189 aa19.29■□□□□ 0.68
CHFR-217ENST00000540537 ADIPOR1Q96A54 375 aa19.29■□□□□ 0.68
CHFR-217ENST00000540537 L3HYPDHQ96EM0 354 aa19.29■□□□□ 0.68
CHFR-217ENST00000540537 HBEGFQ99075 208 aa19.29■□□□□ 0.68
CHFR-217ENST00000540537 FAIM2Q9BWQ8 316 aa19.29■□□□□ 0.68
CHFR-217ENST00000540537 ZNF703Q9H7S9 590 aaPredicted RBP19.29■□□□□ 0.68
CHFR-217ENST00000540537 QPCTLQ9NXS2 382 aa19.29■□□□□ 0.68
CHFR-217ENST00000540537 PSME2Q9UL46 239 aa19.29■□□□□ 0.68
CHFR-217ENST00000540537 DCHS2Q6V1P9 2916 aa19.29■□□□□ 0.68
CHFR-217ENST00000540537 ANKRD33BA6NCL7 494 aa19.28■□□□□ 0.68
CHFR-217ENST00000540537 LRRC3CA6NJW4 275 aa19.28■□□□□ 0.68
CHFR-217ENST00000540537 FIGNL2A6NMB9 653 aa19.28■□□□□ 0.68
CHFR-217ENST00000540537 GOLGA8RI6L899 631 aa19.28■□□□□ 0.68
CHFR-217ENST00000540537 TP53I11O14683 189 aa19.28■□□□□ 0.68
CHFR-217ENST00000540537 ATP1B1P05026 303 aa19.28■□□□□ 0.68
CHFR-217ENST00000540537 SNRPB2P08579 225 aaKnown RBP19.28■□□□□ 0.68
CHFR-217ENST00000540537 CELA3AP09093 270 aa19.28■□□□□ 0.68
CHFR-217ENST00000540537 PYGBP11216 843 aa19.28■□□□□ 0.68
CHFR-217ENST00000540537 S1PR1P21453 382 aa19.28■□□□□ 0.68
CHFR-217ENST00000540537 TMED10P49755 219 aaKnown RBP19.28■□□□□ 0.68
CHFR-217ENST00000540537 LCP2Q13094 533 aa19.28■□□□□ 0.68
CHFR-217ENST00000540537 RPS6KA2Q15349 733 aa19.28■□□□□ 0.68
CHFR-217ENST00000540537 TCHHL1Q5QJ38 904 aaPredicted RBP19.28■□□□□ 0.68
CHFR-217ENST00000540537 TBCELQ5QJ74 424 aa19.28■□□□□ 0.68
CHFR-217ENST00000540537 FAM219BQ5XKK7 198 aa19.28■□□□□ 0.68
CHFR-217ENST00000540537 ACAD11Q709F0 780 aa19.28■□□□□ 0.68
CHFR-217ENST00000540537 MMP21Q8N119 569 aa19.28■□□□□ 0.68
CHFR-217ENST00000540537 LRRC25Q8N386 305 aaPredicted RBP19.28■□□□□ 0.68
CHFR-217ENST00000540537 VWA5B2Q8N398 1253 aa19.28■□□□□ 0.68
CHFR-217ENST00000540537 EIF1ADQ8N9N8 165 aaKnown RBP19.28■□□□□ 0.68
CHFR-217ENST00000540537 METTL6Q8TCB7 284 aa19.28■□□□□ 0.68
CHFR-217ENST00000540537 CHTF18Q8WVB6 975 aa19.28■□□□□ 0.68
CHFR-217ENST00000540537 RND1Q92730 232 aa19.28■□□□□ 0.68
CHFR-217ENST00000540537 TRIM44Q96DX7 344 aaPredicted RBP19.28■□□□□ 0.68
CHFR-217ENST00000540537 TRIM8Q9BZR9 551 aa19.28■□□□□ 0.68
CHFR-217ENST00000540537 LDAHQ9H6V9 325 aa19.28■□□□□ 0.68
CHFR-217ENST00000540537 PNPLA3Q9NST1 481 aa19.28■□□□□ 0.68
CHFR-217ENST00000540537 MCM8Q9UJA3 840 aa19.28■□□□□ 0.68
CHFR-217ENST00000540537 NPFFR2Q9Y5X5 522 aa19.28■□□□□ 0.68
CHFR-217ENST00000540537 EXPH5Q8NEV8 1989 aa19.28■□□□□ 0.68
CHFR-217ENST00000540537 CSMD1Q96PZ7 3565 aa19.28■□□□□ 0.68
CHFR-217ENST00000540537 NCKAP5O14513 1909 aa19.27■□□□□ 0.68
CHFR-217ENST00000540537 ENO4A6NNW6 628 aa19.27■□□□□ 0.68
CHFR-217ENST00000540537 ULK1O75385 1050 aa19.27■□□□□ 0.68
CHFR-217ENST00000540537 ERAL1O75616 437 aaKnown RBP19.27■□□□□ 0.68
CHFR-217ENST00000540537 CSNK2A2P19784 350 aaPredicted RBP19.27■□□□□ 0.68
CHFR-217ENST00000540537 HMOX2P30519 316 aa19.27■□□□□ 0.68
CHFR-217ENST00000540537 CHRNB4P30926 498 aa19.27■□□□□ 0.68
CHFR-217ENST00000540537 KIR3DL1P43629 444 aa19.27■□□□□ 0.68
CHFR-217ENST00000540537 PKNOX1P55347 436 aa19.27■□□□□ 0.68
CHFR-217ENST00000540537 NRG3P56975 720 aa19.27■□□□□ 0.68
CHFR-217ENST00000540537 MAP4K2Q12851 820 aa19.27■□□□□ 0.68
CHFR-217ENST00000540537 PRICKLE4Q2TBC4 344 aa19.27■□□□□ 0.68
CHFR-217ENST00000540537 RPRMLQ8N4K4 120 aa19.27■□□□□ 0.68
CHFR-217ENST00000540537 GBP7Q8N8V2 638 aaPredicted RBP19.27■□□□□ 0.68
CHFR-217ENST00000540537 ACBD4Q8NC06 268 aa19.27■□□□□ 0.68
CHFR-217ENST00000540537 OR5M3Q8NGP4 307 aa19.27■□□□□ 0.68
CHFR-217ENST00000540537 SARAFQ96BY9 339 aa19.27■□□□□ 0.68
CHFR-217ENST00000540537 SECISBP2Q96T21 854 aaKnown RBP19.27■□□□□ 0.68
CHFR-217ENST00000540537 SPOCK3Q9BQ16 436 aa19.27■□□□□ 0.68
CHFR-217ENST00000540537 DOHHQ9BU89 302 aa19.27■□□□□ 0.68
CHFR-217ENST00000540537 MAT2BQ9NZL9 334 aa19.27■□□□□ 0.68
CHFR-217ENST00000540537 TBK1Q9UHD2 729 aa19.27■□□□□ 0.68
CHFR-217ENST00000540537 DCDC2Q9UHG0 476 aa19.27■□□□□ 0.68
CHFR-217ENST00000540537 RNF6Q9Y252 685 aa19.27■□□□□ 0.68
CHFR-217ENST00000540537 CFL2Q9Y281 166 aa19.27■□□□□ 0.68
CHFR-217ENST00000540537 TRGV5A0A0B4J1U4 118 aa19.26■□□□□ 0.67
CHFR-217ENST00000540537 ENO1P06733 434 aaKnown RBP19.26■□□□□ 0.67
CHFR-217ENST00000540537 FREM3P0C091 2139 aa19.26■□□□□ 0.67
CHFR-217ENST00000540537 RFPL3SP0C7P2 107 aa19.26■□□□□ 0.67
CHFR-217ENST00000540537 GPX3P22352 226 aa19.26■□□□□ 0.67
CHFR-217ENST00000540537 ACVR2AP27037 513 aa19.26■□□□□ 0.67
CHFR-217ENST00000540537 FEN1P39748 380 aaKnown RBP19.26■□□□□ 0.67
CHFR-217ENST00000540537 NUP107P57740 925 aa19.26■□□□□ 0.67
CHFR-217ENST00000540537 MGAT2Q10469 447 aa19.26■□□□□ 0.67
CHFR-217ENST00000540537 ZNF585AQ6P3V2 769 aa19.26■□□□□ 0.67
CHFR-217ENST00000540537 TMEM64Q6YI46 380 aa19.26■□□□□ 0.67
CHFR-217ENST00000540537 GSPT2Q8IYD1 628 aaKnown RBP19.26■□□□□ 0.67
CHFR-217ENST00000540537 OR5M9Q8NGP3 310 aa19.26■□□□□ 0.67
CHFR-217ENST00000540537 LILRB4Q8NHJ6 448 aa19.26■□□□□ 0.67
CHFR-217ENST00000540537 SPPL2AQ8TCT8 520 aa19.26■□□□□ 0.67
CHFR-217ENST00000540537 DIO2Q92813 273 aa19.26■□□□□ 0.67
CHFR-217ENST00000540537 KLHL29Q96CT2 875 aa19.26■□□□□ 0.67
CHFR-217ENST00000540537 CCDC126Q96EE4 140 aa19.26■□□□□ 0.67
CHFR-217ENST00000540537 ACPTQ9BZG2 426 aa19.26■□□□□ 0.67
CHFR-217ENST00000540537 BRINP2Q9C0B6 783 aa19.26■□□□□ 0.67
CHFR-217ENST00000540537 ENKD1Q9H0I2 346 aa19.26■□□□□ 0.67
CHFR-217ENST00000540537 ACKR4Q9NPB9 350 aa19.26■□□□□ 0.67
CHFR-217ENST00000540537 B4GALT7Q9UBV7 327 aa19.26■□□□□ 0.67
CHFR-217ENST00000540537 ZNF639Q9UID6 485 aa19.26■□□□□ 0.67
CHFR-217ENST00000540537 ACAD8Q9UKU7 415 aa19.26■□□□□ 0.67
CHFR-217ENST00000540537 INTS1Q8N201 2190 aaKnown RBP19.26■□□□□ 0.67
CHFR-217ENST00000540537 CCDC151A5D8V7 595 aa19.25■□□□□ 0.67
CHFR-217ENST00000540537 WDR1O75083 606 aa19.25■□□□□ 0.67
CHFR-217ENST00000540537 TRIM3O75382 744 aaPredicted RBP19.25■□□□□ 0.67
CHFR-217ENST00000540537 LRATO95237 230 aa19.25■□□□□ 0.67
CHFR-217ENST00000540537 CHN1P15882 459 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms