RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 FNDC7Q5VTL7 733 aa10.99□□□□□ -0.65
CBX3P4-202ENST00000540428 TMEM81Q6P7N7 255 aa10.99□□□□□ -0.65
CBX3P4-202ENST00000540428 PAMR1Q6UXH9 720 aa10.99□□□□□ -0.65
CBX3P4-202ENST00000540428 PACS2Q86VP3 889 aa10.99□□□□□ -0.65
CBX3P4-202ENST00000540428 L3MBTL4Q8NA19 623 aa10.99□□□□□ -0.65
CBX3P4-202ENST00000540428 MBD3L2Q8NHZ7 208 aaPredicted RBP10.99□□□□□ -0.65
CBX3P4-202ENST00000540428 WDR20Q8TBZ3 569 aa10.99□□□□□ -0.65
CBX3P4-202ENST00000540428 DOK4Q8TEW6 326 aa10.99□□□□□ -0.65
CBX3P4-202ENST00000540428 ADIPOR1Q96A54 375 aa10.99□□□□□ -0.65
CBX3P4-202ENST00000540428 TMEM41AQ96HV5 264 aa10.99□□□□□ -0.65
CBX3P4-202ENST00000540428 RILPQ96NA2 401 aa10.99□□□□□ -0.65
CBX3P4-202ENST00000540428 OR10A5Q9H207 317 aa10.99□□□□□ -0.65
CBX3P4-202ENST00000540428 DPH5Q9H2P9 285 aa10.99□□□□□ -0.65
CBX3P4-202ENST00000540428 GRHL1Q9NZI5 618 aa10.99□□□□□ -0.65
CBX3P4-202ENST00000540428 PLEKHA6Q9Y2H5 1048 aa10.99□□□□□ -0.65
CBX3P4-202ENST00000540428 TNPO3Q9Y5L0 923 aaKnown RBP10.99□□□□□ -0.65
CBX3P4-202ENST00000540428 EML6Q6ZMW3 1958 aa10.98□□□□□ -0.65
CBX3P4-202ENST00000540428 TUBAL3A6NHL2 446 aa10.98□□□□□ -0.65
CBX3P4-202ENST00000540428 GLOD5A6NK44 160 aa10.98□□□□□ -0.65
CBX3P4-202ENST00000540428 WASHC1A8K0Z3 465 aa10.98□□□□□ -0.65
CBX3P4-202ENST00000540428 ACSL3O95573 720 aa10.98□□□□□ -0.65
CBX3P4-202ENST00000540428 RAF1P04049 648 aa10.98□□□□□ -0.65
CBX3P4-202ENST00000540428 GFAPP14136 432 aa10.98□□□□□ -0.65
CBX3P4-202ENST00000540428 NAGAP17050 411 aa10.98□□□□□ -0.65
CBX3P4-202ENST00000540428 BMP7P18075 431 aa10.98□□□□□ -0.65
CBX3P4-202ENST00000540428 TACR1P25103 407 aa10.98□□□□□ -0.65
CBX3P4-202ENST00000540428 CTSSP25774 331 aa10.98□□□□□ -0.65
CBX3P4-202ENST00000540428 PIK3R1P27986 724 aa10.98□□□□□ -0.65
CBX3P4-202ENST00000540428 SSTR4P31391 388 aa10.98□□□□□ -0.65
CBX3P4-202ENST00000540428 OPRM1P35372 400 aa10.98□□□□□ -0.65
CBX3P4-202ENST00000540428 CASP3P42574 277 aa10.98□□□□□ -0.65
CBX3P4-202ENST00000540428 FBXW4P57775 412 aa10.98□□□□□ -0.65
CBX3P4-202ENST00000540428 CAV1Q03135 178 aa10.98□□□□□ -0.65
CBX3P4-202ENST00000540428 GTF2H2Q13888 395 aa10.98□□□□□ -0.65
CBX3P4-202ENST00000540428 ACAP2Q15057 778 aa10.98□□□□□ -0.65
CBX3P4-202ENST00000540428 CPSF6Q16630 551 aaKnown RBP eCLIP10.98□□□□□ -0.65
CBX3P4-202ENST00000540428 PFKFB4Q16877 469 aa10.98□□□□□ -0.65
CBX3P4-202ENST00000540428 C10orf62Q5T681 223 aaPredicted RBP10.98□□□□□ -0.65
CBX3P4-202ENST00000540428 C6orf163Q5TEZ5 329 aa10.98□□□□□ -0.65
CBX3P4-202ENST00000540428 GTF2H2CQ6P1K8 395 aa10.98□□□□□ -0.65
CBX3P4-202ENST00000540428 CENPLQ8N0S6 344 aaPredicted RBP10.98□□□□□ -0.65
CBX3P4-202ENST00000540428 ZNF615Q8N8J6 731 aa10.98□□□□□ -0.65
CBX3P4-202ENST00000540428 OR7G1Q8NGA0 311 aa10.98□□□□□ -0.65
CBX3P4-202ENST00000540428 KCTD4Q8WVF5 259 aa10.98□□□□□ -0.65
CBX3P4-202ENST00000540428 WDYHV1Q96HA8 205 aa10.98□□□□□ -0.65
CBX3P4-202ENST00000540428 GNRHR2Q96P88 292 aa10.98□□□□□ -0.65
CBX3P4-202ENST00000540428 SERPINI1Q99574 410 aa10.98□□□□□ -0.65
CBX3P4-202ENST00000540428 IPPKQ9H8X2 491 aa10.98□□□□□ -0.65
CBX3P4-202ENST00000540428 CALHM2Q9HA72 323 aa10.98□□□□□ -0.65
CBX3P4-202ENST00000540428 TEX10Q9NXF1 929 aaPredicted RBP10.98□□□□□ -0.65
CBX3P4-202ENST00000540428 JKAMPQ9P055 326 aa10.98□□□□□ -0.65
CBX3P4-202ENST00000540428 CAMK2AQ9UQM7 478 aa10.98□□□□□ -0.65
CBX3P4-202ENST00000540428 CFL2Q9Y281 166 aa10.98□□□□□ -0.65
CBX3P4-202ENST00000540428 RPH3AQ9Y2J0 694 aaPredicted RBP10.98□□□□□ -0.65
CBX3P4-202ENST00000540428 ABCA4P78363 2273 aa10.98□□□□□ -0.65
CBX3P4-202ENST00000540428 KDM4EB2RXH2 506 aaPredicted RBP10.97□□□□□ -0.65
CBX3P4-202ENST00000540428 PGRMC2O15173 223 aa10.97□□□□□ -0.65
CBX3P4-202ENST00000540428 RAD51CO43502 376 aa10.97□□□□□ -0.65
CBX3P4-202ENST00000540428 ACTL6AO96019 429 aa10.97□□□□□ -0.65
CBX3P4-202ENST00000540428 C2P06681 752 aa10.97□□□□□ -0.65
CBX3P4-202ENST00000540428 CT62P0C5K7 136 aa10.97□□□□□ -0.65
CBX3P4-202ENST00000540428 ABCD3P28288 659 aa10.97□□□□□ -0.65
CBX3P4-202ENST00000540428 MAGEA4P43358 317 aa10.97□□□□□ -0.65
CBX3P4-202ENST00000540428 WNT3P56703 355 aa10.97□□□□□ -0.65
CBX3P4-202ENST00000540428 ADAM8P78325 824 aa10.97□□□□□ -0.65
CBX3P4-202ENST00000540428 MRPS25P82663 173 aaKnown RBP10.97□□□□□ -0.65
CBX3P4-202ENST00000540428 RCAN2Q14206 197 aa10.97□□□□□ -0.65
CBX3P4-202ENST00000540428 BICRALQ6AI39 1079 aa10.97□□□□□ -0.65
CBX3P4-202ENST00000540428 TIGD3Q6B0B8 471 aa10.97□□□□□ -0.65
CBX3P4-202ENST00000540428 KLC3Q6P597 504 aa10.97□□□□□ -0.65
CBX3P4-202ENST00000540428 TMEM64Q6YI46 380 aa10.97□□□□□ -0.65
CBX3P4-202ENST00000540428 GOLGA7Q7Z5G4 137 aa10.97□□□□□ -0.65
CBX3P4-202ENST00000540428 SPATA4Q8NEY3 305 aa10.97□□□□□ -0.65
CBX3P4-202ENST00000540428 OR4K14Q8NGD5 310 aa10.97□□□□□ -0.65
CBX3P4-202ENST00000540428 ZPLD1Q8TCW7 415 aa10.97□□□□□ -0.65
CBX3P4-202ENST00000540428 FBF1Q8TES7 1133 aa10.97□□□□□ -0.65
CBX3P4-202ENST00000540428 UCN3Q969E3 161 aa10.97□□□□□ -0.65
CBX3P4-202ENST00000540428 ABTB1Q969K4 478 aaPredicted RBP10.97□□□□□ -0.65
CBX3P4-202ENST00000540428 TRIB1Q96RU8 372 aa10.97□□□□□ -0.65
CBX3P4-202ENST00000540428 UGT2B28Q9BY64 529 aa10.97□□□□□ -0.65
CBX3P4-202ENST00000540428 AHSPQ9NZD4 102 aa10.97□□□□□ -0.65
CBX3P4-202ENST00000540428 ADAM29Q9UKF5 820 aa10.97□□□□□ -0.65
CBX3P4-202ENST00000540428 SLC6A5Q9Y345 797 aa10.97□□□□□ -0.65
CBX3P4-202ENST00000540428 UTP11Q9Y3A2 253 aaKnown RBP10.97□□□□□ -0.65
CBX3P4-202ENST00000540428 RNF11Q9Y3C5 154 aa10.97□□□□□ -0.65
CBX3P4-202ENST00000540428 AKAP6Q13023 2319 aa10.96□□□□□ -0.65
CBX3P4-202ENST00000540428 ZNF469Q96JG9 3925 aaPredicted RBP10.96□□□□□ -0.65
CBX3P4-202ENST00000540428 A0A1W2PS29 197 aa10.96□□□□□ -0.65
CBX3P4-202ENST00000540428 KLHL2O95198 593 aa10.96□□□□□ -0.65
CBX3P4-202ENST00000540428 ATE1O95260 518 aa10.96□□□□□ -0.65
CBX3P4-202ENST00000540428 CLDN9O95484 217 aa10.96□□□□□ -0.65
CBX3P4-202ENST00000540428 ABCB1P08183 1280 aaPredicted RBP10.96□□□□□ -0.65
CBX3P4-202ENST00000540428 RHOXF2BP0C7M4 288 aa10.96□□□□□ -0.65
CBX3P4-202ENST00000540428 CPMP14384 443 aa10.96□□□□□ -0.65
CBX3P4-202ENST00000540428 CPN1P15169 458 aa10.96□□□□□ -0.65
CBX3P4-202ENST00000540428 KRT15P19012 456 aa10.96□□□□□ -0.65
CBX3P4-202ENST00000540428 GPX3P22352 226 aa10.96□□□□□ -0.65
CBX3P4-202ENST00000540428 PTPN6P29350 595 aa10.96□□□□□ -0.65
CBX3P4-202ENST00000540428 GCKP35557 465 aa10.96□□□□□ -0.65
CBX3P4-202ENST00000540428 XKP51811 444 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms