RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 ZNF347Q96SE7 839 aa21.07■□□□□ 0.96
HOMER3-204ENST00000539827 ZNF607Q96SK3 696 aa21.07■□□□□ 0.96
HOMER3-204ENST00000539827 EPYCQ99645 322 aa21.07■□□□□ 0.96
HOMER3-204ENST00000539827 NPLQ9BXD5 320 aaPredicted RBP21.07■□□□□ 0.96
HOMER3-204ENST00000539827 PRDM9Q9NQV7 894 aa21.07■□□□□ 0.96
HOMER3-204ENST00000539827 EXD2Q9NVH0 621 aa21.07■□□□□ 0.96
HOMER3-204ENST00000539827 DDX18Q9NVP1 670 aaKnown RBP21.07■□□□□ 0.96
HOMER3-204ENST00000539827 PCDHGB3Q9Y5G1 929 aa21.07■□□□□ 0.96
HOMER3-204ENST00000539827 TNFRSF11BO00300 401 aa21.06■□□□□ 0.96
HOMER3-204ENST00000539827 DPM1O60762 260 aa21.06■□□□□ 0.96
HOMER3-204ENST00000539827 FESP07332 822 aa21.06■□□□□ 0.96
HOMER3-204ENST00000539827 ATP6V1B1P15313 513 aa21.06■□□□□ 0.96
HOMER3-204ENST00000539827 IGFBP5P24593 272 aa21.06■□□□□ 0.96
HOMER3-204ENST00000539827 PPP2R1BP30154 601 aa21.06■□□□□ 0.96
HOMER3-204ENST00000539827 PIGAP37287 484 aa21.06■□□□□ 0.96
HOMER3-204ENST00000539827 EPHA4P54764 986 aa21.06■□□□□ 0.96
HOMER3-204ENST00000539827 AMZ1Q400G9 498 aa21.06■□□□□ 0.96
HOMER3-204ENST00000539827 METTL25Q8N6Q8 603 aa21.06■□□□□ 0.96
HOMER3-204ENST00000539827 TTC29Q8NA56 475 aaPredicted RBP21.06■□□□□ 0.96
HOMER3-204ENST00000539827 ZNF555Q8NEP9 628 aa21.06■□□□□ 0.96
HOMER3-204ENST00000539827 NRBF2Q96F24 287 aa21.06■□□□□ 0.96
HOMER3-204ENST00000539827 ZDHHC12Q96GR4 267 aa21.06■□□□□ 0.96
HOMER3-204ENST00000539827 ELF4Q99607 663 aaPredicted RBP21.06■□□□□ 0.96
HOMER3-204ENST00000539827 RBCK1Q9BYM8 510 aa21.06■□□□□ 0.96
HOMER3-204ENST00000539827 HCN3Q9P1Z3 774 aa21.06■□□□□ 0.96
HOMER3-204ENST00000539827 PLCL2Q9UPR0 1127 aa21.06■□□□□ 0.96
HOMER3-204ENST00000539827 ORC6Q9Y5N6 252 aa21.06■□□□□ 0.96
HOMER3-204ENST00000539827 CSNK1G3Q9Y6M4 447 aa21.06■□□□□ 0.96
HOMER3-204ENST00000539827 CCDC88CQ9P219 2028 aa21.06■□□□□ 0.96
HOMER3-204ENST00000539827 GPR75O95800 540 aa21.06■□□□□ 0.96
HOMER3-204ENST00000539827 LINGO3P0C6S8 592 aa21.06■□□□□ 0.96
HOMER3-204ENST00000539827 TDGF1P13385 188 aa21.06■□□□□ 0.96
HOMER3-204ENST00000539827 ITGA2P17301 1181 aa21.06■□□□□ 0.96
HOMER3-204ENST00000539827 POLR2IP36954 125 aaKnown RBP21.06■□□□□ 0.96
HOMER3-204ENST00000539827 MAGEA8P43361 318 aa21.06■□□□□ 0.96
HOMER3-204ENST00000539827 CDH12P55289 794 aa21.06■□□□□ 0.96
HOMER3-204ENST00000539827 FOXD4Q12950 439 aaPredicted RBP21.06■□□□□ 0.96
HOMER3-204ENST00000539827 PUM1Q14671 1186 aaKnown RBP eCLIP21.06■□□□□ 0.96
HOMER3-204ENST00000539827 GPAT3Q53EU6 434 aa21.06■□□□□ 0.96
HOMER3-204ENST00000539827 RNF220Q5VTB9 566 aa21.06■□□□□ 0.96
HOMER3-204ENST00000539827 PMS2CLQ68D20 193 aa21.06■□□□□ 0.96
HOMER3-204ENST00000539827 OR52J3Q8NH60 311 aa21.06■□□□□ 0.96
HOMER3-204ENST00000539827 PDE7BQ9NP56 450 aa21.06■□□□□ 0.96
HOMER3-204ENST00000539827 SEC14L3Q9UDX4 400 aa21.06■□□□□ 0.96
HOMER3-204ENST00000539827 C3orf18Q9UK00 162 aa21.06■□□□□ 0.96
HOMER3-204ENST00000539827 LYVE1Q9Y5Y7 322 aa21.06■□□□□ 0.96
HOMER3-204ENST00000539827 GPC6Q9Y625 555 aaPredicted RBP21.06■□□□□ 0.96
HOMER3-204ENST00000539827 IGHV1OR21-1A0A087WYE8 117 aa21.05■□□□□ 0.96
HOMER3-204ENST00000539827 FOXS1O43638 330 aa21.05■□□□□ 0.96
HOMER3-204ENST00000539827 SOX18P35713 384 aa21.05■□□□□ 0.96
HOMER3-204ENST00000539827 XCR1P46094 333 aa21.05■□□□□ 0.96
HOMER3-204ENST00000539827 MAN2A2P49641 1150 aa21.05■□□□□ 0.96
HOMER3-204ENST00000539827 CRISP3P54108 245 aa21.05■□□□□ 0.96
HOMER3-204ENST00000539827 RAD23AP54725 363 aa21.05■□□□□ 0.96
HOMER3-204ENST00000539827 CSTF1Q05048 431 aaKnown RBP21.05■□□□□ 0.96
HOMER3-204ENST00000539827 EPS8Q12929 822 aa21.05■□□□□ 0.96
HOMER3-204ENST00000539827 TTC23Q5W5X9 447 aa21.05■□□□□ 0.96
HOMER3-204ENST00000539827 LGI4Q8N135 537 aa21.05■□□□□ 0.96
HOMER3-204ENST00000539827 BBS10Q8TAM1 723 aa21.05■□□□□ 0.96
HOMER3-204ENST00000539827 PROX1Q92786 737 aa21.05■□□□□ 0.96
HOMER3-204ENST00000539827 NECAB3Q96P71 396 aaPredicted RBP21.05■□□□□ 0.96
HOMER3-204ENST00000539827 ACTRT3Q9BYD9 372 aa21.05■□□□□ 0.96
HOMER3-204ENST00000539827 MRPS26Q9BYN8 205 aaKnown RBP21.05■□□□□ 0.96
HOMER3-204ENST00000539827 SPRTNQ9H040 489 aaPredicted RBP21.05■□□□□ 0.96
HOMER3-204ENST00000539827 FSCN3Q9NQT6 498 aa21.05■□□□□ 0.96
HOMER3-204ENST00000539827 PRMT8Q9NR22 394 aaPredicted RBP21.05■□□□□ 0.96
HOMER3-204ENST00000539827 EPHA6Q9UF33 1036 aa21.05■□□□□ 0.96
HOMER3-204ENST00000539827 ZNF451Q9Y4E5 1061 aa21.05■□□□□ 0.96
HOMER3-204ENST00000539827 ENPP4Q9Y6X5 453 aa21.05■□□□□ 0.96
HOMER3-204ENST00000539827 ADAMDEC1O15204 470 aa21.05■□□□□ 0.96
HOMER3-204ENST00000539827 LAMTOR5O43504 91 aa21.05■□□□□ 0.96
HOMER3-204ENST00000539827 IFNW1P05000 195 aa21.05■□□□□ 0.96
HOMER3-204ENST00000539827 GNSP15586 552 aa21.05■□□□□ 0.96
HOMER3-204ENST00000539827 NT5EP21589 574 aa21.05■□□□□ 0.96
HOMER3-204ENST00000539827 KCNJ5P48544 419 aa21.05■□□□□ 0.96
HOMER3-204ENST00000539827 SIGLEC14Q08ET2 396 aa21.05■□□□□ 0.96
HOMER3-204ENST00000539827 NDUFA9Q16795 377 aa21.05■□□□□ 0.96
HOMER3-204ENST00000539827 TRMT12Q53H54 448 aaKnown RBP21.05■□□□□ 0.96
HOMER3-204ENST00000539827 ZNF628Q5EBL2 1059 aa21.05■□□□□ 0.96
HOMER3-204ENST00000539827 KDM4DQ6B0I6 523 aa21.05■□□□□ 0.96
HOMER3-204ENST00000539827 ATG16L2Q8NAA4 619 aa21.05■□□□□ 0.96
HOMER3-204ENST00000539827 TANKQ92844 425 aa21.05■□□□□ 0.96
HOMER3-204ENST00000539827 ANKRD9Q96BM1 317 aaPredicted RBP21.05■□□□□ 0.96
HOMER3-204ENST00000539827 RAB33BQ9H082 229 aa21.05■□□□□ 0.96
HOMER3-204ENST00000539827 KIF17Q9P2E2 1029 aa21.05■□□□□ 0.96
HOMER3-204ENST00000539827 FAM32AQ9Y421 112 aaKnown RBP21.05■□□□□ 0.96
HOMER3-204ENST00000539827 B4GAT1O43505 415 aa21.04■□□□□ 0.96
HOMER3-204ENST00000539827 SERPINB7O75635 380 aa21.04■□□□□ 0.96
HOMER3-204ENST00000539827 DNAJB5O75953 348 aa21.04■□□□□ 0.96
HOMER3-204ENST00000539827 FUT4P22083 530 aa21.04■□□□□ 0.96
HOMER3-204ENST00000539827 SEPHS1P49903 392 aa21.04■□□□□ 0.96
HOMER3-204ENST00000539827 GANABQ14697 944 aaKnown RBP21.04■□□□□ 0.96
HOMER3-204ENST00000539827 KCNAB1Q14722 419 aa21.04■□□□□ 0.96
HOMER3-204ENST00000539827 GATAD2AQ86YP4 633 aa21.04■□□□□ 0.96
HOMER3-204ENST00000539827 METTL27Q8N6F8 245 aaPredicted RBP21.04■□□□□ 0.96
HOMER3-204ENST00000539827 OR4C15Q8NGM1 316 aa21.04■□□□□ 0.96
HOMER3-204ENST00000539827 VANGL1Q8TAA9 524 aaPredicted RBP21.04■□□□□ 0.96
HOMER3-204ENST00000539827 APOBEC4Q8WW27 367 aaKnown RBP21.04■□□□□ 0.96
HOMER3-204ENST00000539827 SLC35A4Q96G79 324 aa21.04■□□□□ 0.96
HOMER3-204ENST00000539827 MS4A4EQ96PG1 132 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms