RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 BCAP29Q9UHQ4 241 aa15.12■□□□□ 0.01
TRAF3-204ENST00000539721 GPN3Q9UHW5 284 aaPredicted RBP15.12■□□□□ 0.01
TRAF3-204ENST00000539721 SATB2Q9UPW6 733 aa15.12■□□□□ 0.01
TRAF3-204ENST00000539721 SNX13Q9Y5W8 968 aa15.12■□□□□ 0.01
TRAF3-204ENST00000539721 A0A1W2PNU3 283 aaPredicted RBP15.11■□□□□ 0.01
TRAF3-204ENST00000539721 UPK1AO00322 258 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 ARPC2O15144 300 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 GFRA3O60609 400 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 KCNK5O95279 499 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 CT62P0C5K7 136 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 NCK1P16333 377 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 ERFP50548 548 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 RPS26P62854 115 aaKnown RBP15.11■□□□□ 0.01
TRAF3-204ENST00000539721 TARDBPQ13148 414 aaKnown RBP eCLIP15.11■□□□□ 0.012e-7■■■■□ 26.4
TRAF3-204ENST00000539721 TRMT12Q53H54 448 aaKnown RBP15.11■□□□□ 0.01
TRAF3-204ENST00000539721 ERICH5Q6P6B1 374 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 DGAT2L6Q6ZPD8 337 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 SHISA6Q6ZSJ9 500 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 DHFR2Q86XF0 187 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 ZZZ3Q8IYH5 903 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 GALNT6Q8NCL4 622 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 C7orf57Q8NEG2 295 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 BHLHE22Q8NFJ8 381 aaPredicted RBP15.11■□□□□ 0.01
TRAF3-204ENST00000539721 RIT1Q92963 219 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 FKBP10Q96AY3 582 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 VN1R1Q9GZP7 353 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 SOX17Q9H6I2 414 aaPredicted RBP15.11■□□□□ 0.01
TRAF3-204ENST00000539721 CXorf21Q9HAI6 301 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 MAGEL2Q9UJ55 1249 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 RIF1Q5UIP0 2472 aaKnown RBP15.11■□□□□ 0.01
TRAF3-204ENST00000539721 A0A087WV62 115 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 IGKV3D-11A0A0A0MRZ8 115 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 TEX51A0A1B0GUA7 166 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 SLC30A4O14863 429 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 ENTPD5O75356 428 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 GMNNO75496 209 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 STK17BO94768 372 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 ALBP02768 609 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 HMGN2P05204 90 aaKnown RBP15.11■□□□□ 0.01
TRAF3-204ENST00000539721 HEXBP07686 556 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 IFI6P09912 130 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 NUDT7P0C024 238 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 TNNI3P19429 210 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 MATN1P21941 496 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 SOX18P35713 384 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 PRIM2P49643 509 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 EFNA3P52797 238 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 DSTNP60981 165 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 MGAT2Q10469 447 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 NKG7Q16617 165 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 GCNT6Q5T4J0 391 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 FHL5Q5TD97 284 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 TMEM164Q5U3C3 297 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 TNFAIP8L2Q6P589 184 aaPredicted RBP15.11■□□□□ 0.01
TRAF3-204ENST00000539721 CYP2R1Q6VVX0 501 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 LAPTM4BQ86VI4 370 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 TMPRSS12Q86WS5 348 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 PTOV1Q86YD1 416 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 OR2L13Q8N349 312 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 VWA5B2Q8N398 1253 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 HORMAD2Q8N7B1 307 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 LRGUKQ96M69 825 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 MS4A4EQ96PG1 132 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 SLC26A1Q9H2B4 701 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 AKIRIN1Q9H9L7 192 aaPredicted RBP15.11■□□□□ 0.01
TRAF3-204ENST00000539721 EQTNQ9NQ60 294 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 NTMQ9P121 344 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 ACTR3BQ9P1U1 418 aa15.11■□□□□ 0.01
TRAF3-204ENST00000539721 FAF1Q9UNN5 650 aaPredicted RBP15.11■□□□□ 0.01
TRAF3-204ENST00000539721 C19orf53Q9UNZ5 99 aaPredicted RBP15.11■□□□□ 0.01
TRAF3-204ENST00000539721 CCDC88CQ9P219 2028 aa15.1■□□□□ 0.01
TRAF3-204ENST00000539721 VSTM2BA6NLU5 285 aa15.1■□□□□ 0.01
TRAF3-204ENST00000539721 C9J4A7 227 aa15.1■□□□□ 0.01
TRAF3-204ENST00000539721 PLOD3O60568 738 aa15.1■□□□□ 0.01
TRAF3-204ENST00000539721 TNFRSF21O75509 655 aa15.1■□□□□ 0.01
TRAF3-204ENST00000539721 RECKO95980 971 aa15.1■□□□□ 0.01
TRAF3-204ENST00000539721 GGT1P19440 569 aa15.1■□□□□ 0.01
TRAF3-204ENST00000539721 ATP6V1B2P21281 511 aa15.1■□□□□ 0.01
TRAF3-204ENST00000539721 GALNSP34059 522 aa15.1■□□□□ 0.01
TRAF3-204ENST00000539721 KHKP50053 298 aa15.1■□□□□ 0.01
TRAF3-204ENST00000539721 MAP4K2Q12851 820 aa15.1■□□□□ 0.01
TRAF3-204ENST00000539721 CCNIQ14094 377 aa15.1■□□□□ 0.01
TRAF3-204ENST00000539721 LASP1Q14847 261 aaKnown RBP15.1■□□□□ 0.01
TRAF3-204ENST00000539721 NSDHLQ15738 373 aa15.1■□□□□ 0.01
TRAF3-204ENST00000539721 FXNQ16595 210 aa15.1■□□□□ 0.01
TRAF3-204ENST00000539721 VMACQ2NL98 169 aa15.1■□□□□ 0.01
TRAF3-204ENST00000539721 GLYATQ6IB77 296 aa15.1■□□□□ 0.01
TRAF3-204ENST00000539721 FAM199XQ6PEV8 388 aaPredicted RBP15.1■□□□□ 0.01
TRAF3-204ENST00000539721 PROSER1Q86XN7 944 aa15.1■□□□□ 0.01
TRAF3-204ENST00000539721 CACTIN-AS1Q8N1I8 211 aa15.1■□□□□ 0.01
TRAF3-204ENST00000539721 PLPP5Q8NEB5 264 aa15.1■□□□□ 0.01
TRAF3-204ENST00000539721 FIG4Q92562 907 aa15.1■□□□□ 0.01
TRAF3-204ENST00000539721 CTHRC1Q96CG8 243 aa15.1■□□□□ 0.01
TRAF3-204ENST00000539721 TRIM15Q9C019 465 aa15.1■□□□□ 0.01
TRAF3-204ENST00000539721 OR51I1Q9H343 314 aa15.1■□□□□ 0.01
TRAF3-204ENST00000539721 SERHL2Q9H4I8 314 aa15.1■□□□□ 0.01
TRAF3-204ENST00000539721 ADAP2Q9NPF8 381 aa15.1■□□□□ 0.01
TRAF3-204ENST00000539721 PNO1Q9NRX1 252 aaKnown RBP15.1■□□□□ 0.01
TRAF3-204ENST00000539721 CDV3Q9UKY7 258 aaKnown RBP15.1■□□□□ 0.01
TRAF3-204ENST00000539721 PCDHGA3Q9Y5H0 932 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms