RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 KRT6CP48668 564 aa17.53■□□□□ 0.4
TNFRSF1A-212ENST00000539372 ALDH9A1P49189 494 aa17.53■□□□□ 0.4
TNFRSF1A-212ENST00000539372 MAN2A2P49641 1150 aa17.53■□□□□ 0.4
TNFRSF1A-212ENST00000539372 NUP107P57740 925 aa17.53■□□□□ 0.4
TNFRSF1A-212ENST00000539372 FAM111BQ6SJ93 734 aa17.53■□□□□ 0.4
TNFRSF1A-212ENST00000539372 LCA5Q86VQ0 697 aa17.53■□□□□ 0.4
TNFRSF1A-212ENST00000539372 PRR22Q8IZ63 422 aa17.53■□□□□ 0.4
TNFRSF1A-212ENST00000539372 METTL6Q8TCB7 284 aa17.53■□□□□ 0.4
TNFRSF1A-212ENST00000539372 ACMSDQ8TDX5 336 aa17.53■□□□□ 0.4
TNFRSF1A-212ENST00000539372 MZB1Q8WU39 189 aa17.53■□□□□ 0.4
TNFRSF1A-212ENST00000539372 RND1Q92730 232 aa17.53■□□□□ 0.4
TNFRSF1A-212ENST00000539372 DIO2Q92813 273 aa17.53■□□□□ 0.4
TNFRSF1A-212ENST00000539372 ADIPOR1Q96A54 375 aa17.53■□□□□ 0.4
TNFRSF1A-212ENST00000539372 TP53INP1Q96A56 240 aa17.53■□□□□ 0.4
TNFRSF1A-212ENST00000539372 KLHL29Q96CT2 875 aa17.53■□□□□ 0.4
TNFRSF1A-212ENST00000539372 TRIM44Q96DX7 344 aaPredicted RBP17.53■□□□□ 0.4
TNFRSF1A-212ENST00000539372 DOHHQ9BU89 302 aa17.53■□□□□ 0.4
TNFRSF1A-212ENST00000539372 ZNF703Q9H7S9 590 aaPredicted RBP17.53■□□□□ 0.4
TNFRSF1A-212ENST00000539372 ACAD8Q9UKU7 415 aa17.53■□□□□ 0.4
TNFRSF1A-212ENST00000539372 RNF6Q9Y252 685 aa17.53■□□□□ 0.4
TNFRSF1A-212ENST00000539372 CREBBPQ92793 2442 aa17.53■□□□□ 0.4
TNFRSF1A-212ENST00000539372 CSMD1Q96PZ7 3565 aa17.53■□□□□ 0.4
TNFRSF1A-212ENST00000539372 TRGV5A0A0B4J1U4 118 aa17.52■□□□□ 0.4
TNFRSF1A-212ENST00000539372 A0A1W2PPM1 405 aa17.52■□□□□ 0.4
TNFRSF1A-212ENST00000539372 GOLGA6L10A6NI86 522 aa17.52■□□□□ 0.4
TNFRSF1A-212ENST00000539372 FAM90A27PA6NNH2 459 aa17.52■□□□□ 0.4
TNFRSF1A-212ENST00000539372 AQP7O14520 342 aa17.52■□□□□ 0.4
TNFRSF1A-212ENST00000539372 BCKDKO14874 412 aa17.52■□□□□ 0.4
TNFRSF1A-212ENST00000539372 ULK1O75385 1050 aa17.52■□□□□ 0.4
TNFRSF1A-212ENST00000539372 ESRRBO95718 433 aa17.52■□□□□ 0.4
TNFRSF1A-212ENST00000539372 S1PR1P21453 382 aa17.52■□□□□ 0.4
TNFRSF1A-212ENST00000539372 HTR6P50406 440 aa17.52■□□□□ 0.4
TNFRSF1A-212ENST00000539372 DUSP2Q05923 314 aa17.52■□□□□ 0.4
TNFRSF1A-212ENST00000539372 EXOSC7Q15024 291 aaKnown RBP17.52■□□□□ 0.4
TNFRSF1A-212ENST00000539372 BICRALQ6AI39 1079 aa17.52■□□□□ 0.4
TNFRSF1A-212ENST00000539372 GDF7Q7Z4P5 450 aa17.52■□□□□ 0.4
TNFRSF1A-212ENST00000539372 CCDC71Q8IV32 467 aaPredicted RBP17.52■□□□□ 0.4
TNFRSF1A-212ENST00000539372 SLC22A9Q8IVM8 553 aa17.52■□□□□ 0.4
TNFRSF1A-212ENST00000539372 VWA5B2Q8N398 1253 aa17.52■□□□□ 0.4
TNFRSF1A-212ENST00000539372 ADCY4Q8NFM4 1077 aa17.52■□□□□ 0.4
TNFRSF1A-212ENST00000539372 OR7G1Q8NGA0 311 aa17.52■□□□□ 0.4
TNFRSF1A-212ENST00000539372 CHTF18Q8WVB6 975 aa17.52■□□□□ 0.4
TNFRSF1A-212ENST00000539372 KCNA7Q96RP8 456 aa17.52■□□□□ 0.4
TNFRSF1A-212ENST00000539372 FAIM2Q9BWQ8 316 aa17.52■□□□□ 0.4
TNFRSF1A-212ENST00000539372 ACPTQ9BZG2 426 aa17.52■□□□□ 0.4
TNFRSF1A-212ENST00000539372 TRIM8Q9BZR9 551 aa17.52■□□□□ 0.4
TNFRSF1A-212ENST00000539372 SPRR3Q9UBC9 169 aa17.52■□□□□ 0.4
TNFRSF1A-212ENST00000539372 FETUBQ9UGM5 382 aa17.52■□□□□ 0.4
TNFRSF1A-212ENST00000539372 DTX4Q9Y2E6 619 aa17.52■□□□□ 0.4
TNFRSF1A-212ENST00000539372 TIMM22Q9Y584 194 aa17.52■□□□□ 0.4
TNFRSF1A-212ENST00000539372 NPFFR2Q9Y5X5 522 aa17.52■□□□□ 0.4
TNFRSF1A-212ENST00000539372 DNAJC13O75165 2243 aa17.52■□□□□ 0.39
TNFRSF1A-212ENST00000539372 CACNA1CQ13936 2221 aa17.52■□□□□ 0.39
TNFRSF1A-212ENST00000539372 MYO9AB2RTY4 2548 aa17.52■□□□□ 0.39
TNFRSF1A-212ENST00000539372 PKDREJQ9NTG1 2253 aa17.51■□□□□ 0.39
TNFRSF1A-212ENST00000539372 CAPN14A8MX76 684 aa17.51■□□□□ 0.39
TNFRSF1A-212ENST00000539372 TP53I11O14683 189 aa17.51■□□□□ 0.39
TNFRSF1A-212ENST00000539372 SUSD5O60279 629 aa17.51■□□□□ 0.39
TNFRSF1A-212ENST00000539372 SHBGP04278 402 aa17.51■□□□□ 0.39
TNFRSF1A-212ENST00000539372 GSTA1P08263 222 aa17.51■□□□□ 0.39
TNFRSF1A-212ENST00000539372 HSD3B1P14060 373 aa17.51■□□□□ 0.39
TNFRSF1A-212ENST00000539372 CSNK2A2P19784 350 aaPredicted RBP17.51■□□□□ 0.39
TNFRSF1A-212ENST00000539372 ENDOUP21128 410 aaKnown RBP17.51■□□□□ 0.39
TNFRSF1A-212ENST00000539372 GPX3P22352 226 aa17.51■□□□□ 0.39
TNFRSF1A-212ENST00000539372 HSD3B2P26439 372 aa17.51■□□□□ 0.39
TNFRSF1A-212ENST00000539372 ACVR2AP27037 513 aa17.51■□□□□ 0.39
TNFRSF1A-212ENST00000539372 SLCO1A2P46721 670 aa17.51■□□□□ 0.39
TNFRSF1A-212ENST00000539372 HMGCS1Q01581 520 aa17.51■□□□□ 0.39
TNFRSF1A-212ENST00000539372 MGAT2Q10469 447 aa17.51■□□□□ 0.39
TNFRSF1A-212ENST00000539372 CSTF3Q12996 717 aaKnown RBP17.51■□□□□ 0.39
TNFRSF1A-212ENST00000539372 LCP2Q13094 533 aa17.51■□□□□ 0.39
TNFRSF1A-212ENST00000539372 DUSP8Q13202 625 aa17.51■□□□□ 0.39
TNFRSF1A-212ENST00000539372 RPS6KA2Q15349 733 aa17.51■□□□□ 0.39
TNFRSF1A-212ENST00000539372 NNATQ16517 81 aa17.51■□□□□ 0.39
TNFRSF1A-212ENST00000539372 PRICKLE4Q2TBC4 344 aa17.51■□□□□ 0.39
TNFRSF1A-212ENST00000539372 SCIMPQ6UWF3 145 aa17.51■□□□□ 0.39
TNFRSF1A-212ENST00000539372 ZNF295-AS1Q8N0V1 137 aa17.51■□□□□ 0.39
TNFRSF1A-212ENST00000539372 CCNYL1Q8N7R7 359 aa17.51■□□□□ 0.39
TNFRSF1A-212ENST00000539372 SIMC1Q8NDZ2 872 aa17.51■□□□□ 0.39
TNFRSF1A-212ENST00000539372 ASB5Q8WWX0 329 aa17.51■□□□□ 0.39
TNFRSF1A-212ENST00000539372 L3HYPDHQ96EM0 354 aa17.51■□□□□ 0.39
TNFRSF1A-212ENST00000539372 UCK2Q9BZX2 261 aa17.51■□□□□ 0.39
TNFRSF1A-212ENST00000539372 SLC6A15Q9H2J7 730 aa17.51■□□□□ 0.39
TNFRSF1A-212ENST00000539372 ALKBH4Q9NXW9 302 aa17.51■□□□□ 0.39
TNFRSF1A-212ENST00000539372 MAT2BQ9NZL9 334 aa17.51■□□□□ 0.39
TNFRSF1A-212ENST00000539372 HEY2Q9UBP5 337 aa17.51■□□□□ 0.39
TNFRSF1A-212ENST00000539372 BCAP29Q9UHQ4 241 aa17.51■□□□□ 0.39
TNFRSF1A-212ENST00000539372 PSME2Q9UL46 239 aa17.51■□□□□ 0.39
TNFRSF1A-212ENST00000539372 EMCNQ9ULC0 261 aa17.51■□□□□ 0.39
TNFRSF1A-212ENST00000539372 LRBAP50851 2863 aa17.5■□□□□ 0.39
TNFRSF1A-212ENST00000539372 ABCA12Q86UK0 2595 aa17.5■□□□□ 0.39
TNFRSF1A-212ENST00000539372 NKX2-6A6NCS4 301 aa17.5■□□□□ 0.39
TNFRSF1A-212ENST00000539372 SMIM23A6NLE4 172 aa17.5■□□□□ 0.39
TNFRSF1A-212ENST00000539372 FIGNL2A6NMB9 653 aa17.5■□□□□ 0.39
TNFRSF1A-212ENST00000539372 PCDH7O60245 1069 aa17.5■□□□□ 0.39
TNFRSF1A-212ENST00000539372 HCN1O60741 890 aa17.5■□□□□ 0.39
TNFRSF1A-212ENST00000539372 ATP1B1P05026 303 aa17.5■□□□□ 0.39
TNFRSF1A-212ENST00000539372 CHRNB4P30926 498 aa17.5■□□□□ 0.39
TNFRSF1A-212ENST00000539372 TRPC1P48995 793 aa17.5■□□□□ 0.39
TNFRSF1A-212ENST00000539372 NRG3P56975 720 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms