RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 TMEM216Q9P0N5 145 aa20.42■□□□□ 0.86
SCARB1-206ENST00000539320 TNFRSF10DQ9UBN6 386 aa20.42■□□□□ 0.86
SCARB1-206ENST00000539320 GOLGA6L10A6NI86 522 aa20.41■□□□□ 0.86
SCARB1-206ENST00000539320 TP53I11O14683 189 aa20.41■□□□□ 0.86
SCARB1-206ENST00000539320 SUPT7LO94864 414 aa20.41■□□□□ 0.86
SCARB1-206ENST00000539320 PORP16435 677 aaPredicted RBP20.41■□□□□ 0.86
SCARB1-206ENST00000539320 DEKP35659 375 aaKnown RBP20.41■□□□□ 0.86
SCARB1-206ENST00000539320 HSD17B3P37058 310 aa20.41■□□□□ 0.86
SCARB1-206ENST00000539320 TMED10P49755 219 aaKnown RBP20.41■□□□□ 0.86
SCARB1-206ENST00000539320 PMPCAQ10713 525 aa20.41■□□□□ 0.86
SCARB1-206ENST00000539320 RASA2Q15283 850 aa20.41■□□□□ 0.86
SCARB1-206ENST00000539320 UNC50Q53HI1 259 aa20.41■□□□□ 0.86
SCARB1-206ENST00000539320 TBCELQ5QJ74 424 aa20.41■□□□□ 0.86
SCARB1-206ENST00000539320 ZNF678Q5SXM1 525 aa20.41■□□□□ 0.86
SCARB1-206ENST00000539320 TMEM64Q6YI46 380 aa20.41■□□□□ 0.86
SCARB1-206ENST00000539320 B3GNT6Q6ZMB0 384 aa20.41■□□□□ 0.86
SCARB1-206ENST00000539320 MMP21Q8N119 569 aa20.41■□□□□ 0.86
SCARB1-206ENST00000539320 LRRC25Q8N386 305 aaPredicted RBP20.41■□□□□ 0.86
SCARB1-206ENST00000539320 VWA5B2Q8N398 1253 aa20.41■□□□□ 0.86
SCARB1-206ENST00000539320 C1orf52Q8N6N3 182 aaKnown RBP20.41■□□□□ 0.86
SCARB1-206ENST00000539320 CDYL2Q8N8U2 506 aa20.41■□□□□ 0.86
SCARB1-206ENST00000539320 DIO2Q92813 273 aa20.41■□□□□ 0.86
SCARB1-206ENST00000539320 JSRP1Q96MG2 331 aaPredicted RBP20.41■□□□□ 0.86
SCARB1-206ENST00000539320 ZNF382Q96SR6 550 aa20.41■□□□□ 0.86
SCARB1-206ENST00000539320 QPCTLQ9NXS2 382 aa20.41■□□□□ 0.86
SCARB1-206ENST00000539320 PSMC3IPQ9P2W1 217 aaPredicted RBP20.41■□□□□ 0.86
SCARB1-206ENST00000539320 SPRR3Q9UBC9 169 aa20.41■□□□□ 0.86
SCARB1-206ENST00000539320 B4GALT7Q9UBV7 327 aa20.41■□□□□ 0.86
SCARB1-206ENST00000539320 ACAD8Q9UKU7 415 aa20.41■□□□□ 0.86
SCARB1-206ENST00000539320 CES1P1Q9UKY3 287 aa20.41■□□□□ 0.86
SCARB1-206ENST00000539320 POLQO75417 2590 aa20.41■□□□□ 0.86
SCARB1-206ENST00000539320 MANBAO00462 879 aa20.4■□□□□ 0.86
SCARB1-206ENST00000539320 WDR1O75083 606 aa20.4■□□□□ 0.86
SCARB1-206ENST00000539320 KRT6AP02538 564 aa20.4■□□□□ 0.86
SCARB1-206ENST00000539320 KRT6BP04259 564 aa20.4■□□□□ 0.86
SCARB1-206ENST00000539320 RFPL3SP0C7P2 107 aa20.4■□□□□ 0.86
SCARB1-206ENST00000539320 HSD3B1P14060 373 aa20.4■□□□□ 0.86
SCARB1-206ENST00000539320 ENDOUP21128 410 aaKnown RBP20.4■□□□□ 0.86
SCARB1-206ENST00000539320 ATP5F1P24539 256 aaPredicted RBP20.4■□□□□ 0.86
SCARB1-206ENST00000539320 HSD3B2P26439 372 aa20.4■□□□□ 0.86
SCARB1-206ENST00000539320 KRT6CP48668 564 aa20.4■□□□□ 0.86
SCARB1-206ENST00000539320 NRG3P56975 720 aa20.4■□□□□ 0.86
SCARB1-206ENST00000539320 FBXW4P57775 412 aa20.4■□□□□ 0.86
SCARB1-206ENST00000539320 TCHHL1Q5QJ38 904 aaPredicted RBP20.4■□□□□ 0.86
SCARB1-206ENST00000539320 WLSQ5T9L3 541 aa20.4■□□□□ 0.86
SCARB1-206ENST00000539320 GPRIN3Q6ZVF9 776 aa20.4■□□□□ 0.86
SCARB1-206ENST00000539320 CCDC71Q8IV32 467 aaPredicted RBP20.4■□□□□ 0.86
SCARB1-206ENST00000539320 C17orf47Q8NEP4 570 aa20.4■□□□□ 0.86
SCARB1-206ENST00000539320 LILRB4Q8NHJ6 448 aa20.4■□□□□ 0.86
SCARB1-206ENST00000539320 CHTF18Q8WVB6 975 aa20.4■□□□□ 0.86
SCARB1-206ENST00000539320 ADIPOR1Q96A54 375 aa20.4■□□□□ 0.86
SCARB1-206ENST00000539320 KLHL29Q96CT2 875 aa20.4■□□□□ 0.86
SCARB1-206ENST00000539320 TREX2Q9BQ50 279 aaPredicted RBP20.4■□□□□ 0.86
SCARB1-206ENST00000539320 FAIM2Q9BWQ8 316 aa20.4■□□□□ 0.86
SCARB1-206ENST00000539320 FAM215AQ9Y5M1 114 aa20.4■□□□□ 0.86
SCARB1-206ENST00000539320 NPFFR2Q9Y5X5 522 aa20.4■□□□□ 0.86
SCARB1-206ENST00000539320 ANKRD33BA6NCL7 494 aa20.39■□□□□ 0.85
SCARB1-206ENST00000539320 NKX2-6A6NCS4 301 aa20.39■□□□□ 0.85
SCARB1-206ENST00000539320 DLX3O60479 287 aa20.39■□□□□ 0.85
SCARB1-206ENST00000539320 ERAL1O75616 437 aaKnown RBP20.39■□□□□ 0.85
SCARB1-206ENST00000539320 GPX3P22352 226 aa20.39■□□□□ 0.85
SCARB1-206ENST00000539320 CSTF3Q12996 717 aaKnown RBP20.39■□□□□ 0.85
SCARB1-206ENST00000539320 C1orf185Q5T7R7 199 aa20.39■□□□□ 0.85
SCARB1-206ENST00000539320 LIX1Q8N485 282 aa20.39■□□□□ 0.85
SCARB1-206ENST00000539320 SPPL2AQ8TCT8 520 aa20.39■□□□□ 0.85
SCARB1-206ENST00000539320 ACMSDQ8TDX5 336 aa20.39■□□□□ 0.85
SCARB1-206ENST00000539320 TM4SF18Q96CE8 201 aa20.39■□□□□ 0.85
SCARB1-206ENST00000539320 C14orf79Q96F83 325 aa20.39■□□□□ 0.85
SCARB1-206ENST00000539320 SECISBP2Q96T21 854 aaKnown RBP20.39■□□□□ 0.85
SCARB1-206ENST00000539320 BRINP2Q9C0B6 783 aa20.39■□□□□ 0.85
SCARB1-206ENST00000539320 SLC6A15Q9H2J7 730 aa20.39■□□□□ 0.85
SCARB1-206ENST00000539320 MAT2BQ9NZL9 334 aa20.39■□□□□ 0.85
SCARB1-206ENST00000539320 VPS29Q9UBQ0 182 aa20.39■□□□□ 0.85
SCARB1-206ENST00000539320 FETUBQ9UGM5 382 aa20.39■□□□□ 0.85
SCARB1-206ENST00000539320 STK38LQ9Y2H1 464 aa20.39■□□□□ 0.85
SCARB1-206ENST00000539320 EXPH5Q8NEV8 1989 aa20.39■□□□□ 0.85
SCARB1-206ENST00000539320 NCKAP5O14513 1909 aa20.38■□□□□ 0.85
SCARB1-206ENST00000539320 GOLGA8RI6L899 631 aa20.38■□□□□ 0.85
SCARB1-206ENST00000539320 TRIM3O75382 744 aaPredicted RBP20.38■□□□□ 0.85
SCARB1-206ENST00000539320 ATP1B1P05026 303 aa20.38■□□□□ 0.85
SCARB1-206ENST00000539320 RHOXF2BP0C7M4 288 aa20.38■□□□□ 0.85
SCARB1-206ENST00000539320 CSNK2A2P19784 350 aaPredicted RBP20.38■□□□□ 0.85
SCARB1-206ENST00000539320 GDF1P27539 372 aa20.38■□□□□ 0.85
SCARB1-206ENST00000539320 HMOX2P30519 316 aa20.38■□□□□ 0.85
SCARB1-206ENST00000539320 FEN1P39748 380 aaKnown RBP20.38■□□□□ 0.85
SCARB1-206ENST00000539320 TRA2BP62995 288 aaKnown RBP20.38■□□□□ 0.85
SCARB1-206ENST00000539320 RPP38P78345 283 aaKnown RBP20.38■□□□□ 0.85
SCARB1-206ENST00000539320 TFF3Q07654 80 aa20.38■□□□□ 0.85
SCARB1-206ENST00000539320 PRICKLE4Q2TBC4 344 aa20.38■□□□□ 0.85
SCARB1-206ENST00000539320 RTL6Q6ICC9 239 aa20.38■□□□□ 0.85
SCARB1-206ENST00000539320 SLC22A9Q8IVM8 553 aa20.38■□□□□ 0.85
SCARB1-206ENST00000539320 PRR22Q8IZ63 422 aa20.38■□□□□ 0.85
SCARB1-206ENST00000539320 CNPY4Q8N129 248 aa20.38■□□□□ 0.85
SCARB1-206ENST00000539320 RHOXF2Q9BQY4 288 aa20.38■□□□□ 0.85
SCARB1-206ENST00000539320 TTYH2Q9BSA4 534 aa20.38■□□□□ 0.85
SCARB1-206ENST00000539320 TXLNGYQ9BZA5 131 aa20.38■□□□□ 0.85
SCARB1-206ENST00000539320 UCK2Q9BZX2 261 aa20.38■□□□□ 0.85
SCARB1-206ENST00000539320 ACKR4Q9NPB9 350 aa20.38■□□□□ 0.85
SCARB1-206ENST00000539320 KCNJ16Q9NPI9 418 aa20.38■□□□□ 0.85
SCARB1-206ENST00000539320 NPDC1Q9NQX5 325 aaPredicted RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms