RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 ATAD1Q8NBU5 361 aa2.92□□□□□ -1.94
CCDC7-209ENST00000539197 SPATA18Q8TC71 538 aa2.92□□□□□ -1.94
CCDC7-209ENST00000539197 ULK4Q96C45 1275 aa2.92□□□□□ -1.94
CCDC7-209ENST00000539197 CDKN2AIPNLQ96HQ2 116 aa2.92□□□□□ -1.94
CCDC7-209ENST00000539197 RASL10BQ96S79 203 aa2.92□□□□□ -1.94
CCDC7-209ENST00000539197 SRD5A3Q9H8P0 318 aa2.92□□□□□ -1.94
CCDC7-209ENST00000539197 ZNF702PQ9H963 129 aa2.92□□□□□ -1.94
CCDC7-209ENST00000539197 FBXL5Q9UKA1 691 aa2.92□□□□□ -1.94
CCDC7-209ENST00000539197 CDH7Q9ULB5 785 aa2.92□□□□□ -1.94
CCDC7-209ENST00000539197 MAGEB16A2A368 324 aa2.91□□□□□ -1.94
CCDC7-209ENST00000539197 EEF2KO00418 725 aaKnown RBP2.91□□□□□ -1.94
CCDC7-209ENST00000539197 CHUKO15111 745 aa2.91□□□□□ -1.94
CCDC7-209ENST00000539197 SYT7O43581 403 aa2.91□□□□□ -1.94
CCDC7-209ENST00000539197 NUDT21O43809 227 aaKnown RBP2.91□□□□□ -1.94
CCDC7-209ENST00000539197 ATP9AO75110 1047 aa2.91□□□□□ -1.94
CCDC7-209ENST00000539197 WISP3O95389 354 aaPredicted RBP2.91□□□□□ -1.94
CCDC7-209ENST00000539197 IGHV3-9P01782 118 aa2.91□□□□□ -1.94
CCDC7-209ENST00000539197 CPA3P15088 417 aa2.91□□□□□ -1.94
CCDC7-209ENST00000539197 IDSP22304 550 aa2.91□□□□□ -1.94
CCDC7-209ENST00000539197 XCR1P46094 333 aa2.91□□□□□ -1.94
CCDC7-209ENST00000539197 KCNJ1P48048 391 aa2.91□□□□□ -1.94
CCDC7-209ENST00000539197 NT5C2P49902 561 aa2.91□□□□□ -1.94
CCDC7-209ENST00000539197 RPS8P62241 208 aaKnown RBP2.91□□□□□ -1.94
CCDC7-209ENST00000539197 SLC34A1Q06495 639 aa2.91□□□□□ -1.94
CCDC7-209ENST00000539197 ARHGAP1Q07960 439 aa2.91□□□□□ -1.94
CCDC7-209ENST00000539197 BFSP1Q12934 665 aa2.91□□□□□ -1.94
CCDC7-209ENST00000539197 MPP7Q5T2T1 576 aa2.91□□□□□ -1.94
CCDC7-209ENST00000539197 DDI2Q5TDH0 399 aa2.91□□□□□ -1.94
CCDC7-209ENST00000539197 HOOK3Q86VS8 718 aa2.91□□□□□ -1.94
CCDC7-209ENST00000539197 TUSC5Q8IXB3 177 aa2.91□□□□□ -1.94
CCDC7-209ENST00000539197 MLPHQ9BV36 600 aaPredicted RBP2.91□□□□□ -1.94
CCDC7-209ENST00000539197 TUFT1Q9NNX1 390 aa2.91□□□□□ -1.94
CCDC7-209ENST00000539197 MRPL17Q9NRX2 175 aaKnown RBP2.91□□□□□ -1.94
CCDC7-209ENST00000539197 DPM3Q9P2X0 92 aa2.91□□□□□ -1.94
CCDC7-209ENST00000539197 CIDEBQ9UHD4 219 aa2.91□□□□□ -1.94
CCDC7-209ENST00000539197 OR1A2Q9Y585 309 aa2.91□□□□□ -1.94
CCDC7-209ENST00000539197 KIAA1217Q5T5P2 1943 aa2.91□□□□□ -1.94
CCDC7-209ENST00000539197 FAM149AA5PLN7 773 aa2.9□□□□□ -1.95
CCDC7-209ENST00000539197 SDR42E2A6NKP2 422 aa2.9□□□□□ -1.95
CCDC7-209ENST00000539197 ANXA9O76027 345 aa2.9□□□□□ -1.95
CCDC7-209ENST00000539197 GAS8O95995 478 aa2.9□□□□□ -1.95
CCDC7-209ENST00000539197 GH1P01241 217 aa2.9□□□□□ -1.95
CCDC7-209ENST00000539197 GLRA1P23415 457 aa2.9□□□□□ -1.95
CCDC7-209ENST00000539197 FRKP42685 505 aaPredicted RBP2.9□□□□□ -1.95
CCDC7-209ENST00000539197 CCR4P51679 360 aa2.9□□□□□ -1.95
CCDC7-209ENST00000539197 SERTAD2Q14140 314 aa2.9□□□□□ -1.95
CCDC7-209ENST00000539197 XKR4Q5GH76 650 aa2.9□□□□□ -1.95
CCDC7-209ENST00000539197 NHSL2Q5HYW2 709 aa2.9□□□□□ -1.95
CCDC7-209ENST00000539197 C1orf189Q5VU69 101 aa2.9□□□□□ -1.95
CCDC7-209ENST00000539197 PODNL1Q6PEZ8 512 aa2.9□□□□□ -1.95
CCDC7-209ENST00000539197 CYP4V2Q6ZWL3 525 aaPredicted RBP2.9□□□□□ -1.95
CCDC7-209ENST00000539197 AQP12AQ8IXF9 295 aa2.9□□□□□ -1.95
CCDC7-209ENST00000539197 KLHDC8AQ8IYD2 350 aa2.9□□□□□ -1.95
CCDC7-209ENST00000539197 THEM5Q8N1Q8 247 aa2.9□□□□□ -1.95
CCDC7-209ENST00000539197 ADAMTS16Q8TE57 1224 aa2.9□□□□□ -1.95
CCDC7-209ENST00000539197 TFB1MQ8WVM0 346 aaKnown RBP2.9□□□□□ -1.95
CCDC7-209ENST00000539197 MR1Q95460 341 aa2.9□□□□□ -1.95
CCDC7-209ENST00000539197 ZMAT2Q96NC0 199 aaKnown RBP2.9□□□□□ -1.95
CCDC7-209ENST00000539197 ZNF559Q9BR84 538 aa2.9□□□□□ -1.95
CCDC7-209ENST00000539197 MIEF1Q9NQG6 463 aa2.9□□□□□ -1.95
CCDC7-209ENST00000539197 HPS4Q9NQG7 708 aa2.9□□□□□ -1.95
CCDC7-209ENST00000539197 SEPT10Q9P0V9 454 aa2.9□□□□□ -1.95
CCDC7-209ENST00000539197 ERVK-19Q9WJR5 959 aa2.9□□□□□ -1.95
CCDC7-209ENST00000539197 ACEP12821 1306 aa2.9□□□□□ -1.95
CCDC7-209ENST00000539197 A0A087X0K7 114 aa2.89□□□□□ -1.95
CCDC7-209ENST00000539197 GTPBP10A4D1E9 387 aaKnown RBP2.89□□□□□ -1.95
CCDC7-209ENST00000539197 MFSD2BA6NFX1 497 aa2.89□□□□□ -1.95
CCDC7-209ENST00000539197 FUT3P21217 361 aa2.89□□□□□ -1.95
CCDC7-209ENST00000539197 OR1D2P34982 312 aa2.89□□□□□ -1.95
CCDC7-209ENST00000539197 DIO3P55073 304 aa2.89□□□□□ -1.95
CCDC7-209ENST00000539197 SPHARQ15513 63 aa2.89□□□□□ -1.95
CCDC7-209ENST00000539197 KYAT1Q16773 422 aa2.89□□□□□ -1.95
CCDC7-209ENST00000539197 CCDC158Q5M9N0 1113 aa2.89□□□□□ -1.95
CCDC7-209ENST00000539197 TMED8Q6PL24 325 aaPredicted RBP2.89□□□□□ -1.95
CCDC7-209ENST00000539197 PRSS48Q7RTY5 328 aa2.89□□□□□ -1.95
CCDC7-209ENST00000539197 C17orf64Q86WR6 236 aa2.89□□□□□ -1.95
CCDC7-209ENST00000539197 GPR65Q8IYL9 337 aa2.89□□□□□ -1.95
CCDC7-209ENST00000539197 GOLGA5Q8TBA6 731 aa2.89□□□□□ -1.95
CCDC7-209ENST00000539197 PRCCQ92733 491 aaPredicted RBP2.89□□□□□ -1.95
CCDC7-209ENST00000539197 TEKT1Q969V4 418 aa2.89□□□□□ -1.95
CCDC7-209ENST00000539197 UTP14AQ9BVJ6 771 aaKnown RBP2.89□□□□□ -1.95
CCDC7-209ENST00000539197 NAPBQ9H115 298 aa2.89□□□□□ -1.95
CCDC7-209ENST00000539197 ZNF331Q9NQX6 463 aaPredicted RBP2.89□□□□□ -1.95
CCDC7-209ENST00000539197 TEKT2Q9UIF3 430 aa2.89□□□□□ -1.95
CCDC7-209ENST00000539197 ZNF175Q9Y473 711 aa2.89□□□□□ -1.95
CCDC7-209ENST00000539197 GAKO14976 1311 aa2.89□□□□□ -1.95
CCDC7-209ENST00000539197 RAI1Q7Z5J4 1906 aaPredicted RBP2.88□□□□□ -1.95
CCDC7-209ENST00000539197 C13orf42A0A1B0GVH6 325 aa2.88□□□□□ -1.95
CCDC7-209ENST00000539197 K7ERI5 159 aa2.88□□□□□ -1.95
CCDC7-209ENST00000539197 PSMD3O43242 534 aa2.88□□□□□ -1.95
CCDC7-209ENST00000539197 STX6O43752 255 aa2.88□□□□□ -1.95
CCDC7-209ENST00000539197 GLCEO94923 617 aa2.88□□□□□ -1.95
CCDC7-209ENST00000539197 NUDT14O95848 222 aa2.88□□□□□ -1.95
CCDC7-209ENST00000539197 ARHGDIBP52566 201 aa2.88□□□□□ -1.95
CCDC7-209ENST00000539197 KCNK10P57789 538 aa2.88□□□□□ -1.95
CCDC7-209ENST00000539197 MFGE8Q08431 387 aaPredicted RBP2.88□□□□□ -1.95
CCDC7-209ENST00000539197 HERPUD1Q15011 391 aa2.88□□□□□ -1.95
CCDC7-209ENST00000539197 RPS6KA1Q15418 735 aa2.88□□□□□ -1.95
CCDC7-209ENST00000539197 CCDC14Q49A88 953 aa2.88□□□□□ -1.95
CCDC7-209ENST00000539197 Q6ZRG5 221 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms