RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 HNRNPCL2B2RXH8 293 aa13.92□□□□□ -0.18
ATL3-203ENST00000538786 HNRNPCL3B7ZW38 293 aa13.92□□□□□ -0.18
ATL3-203ENST00000538786 E9PQ18 207 aa13.92□□□□□ -0.18
ATL3-203ENST00000538786 B4GAT1O43505 415 aa13.92□□□□□ -0.18
ATL3-203ENST00000538786 CHRM4P08173 479 aa13.92□□□□□ -0.18
ATL3-203ENST00000538786 HNRNPCL4P0DMR1 293 aa13.92□□□□□ -0.18
ATL3-203ENST00000538786 CDH3P22223 829 aa13.92□□□□□ -0.18
ATL3-203ENST00000538786 MAN2A2P49641 1150 aa13.92□□□□□ -0.18
ATL3-203ENST00000538786 GABARAPL2P60520 117 aa13.92□□□□□ -0.18
ATL3-203ENST00000538786 OLR1P78380 273 aa13.92□□□□□ -0.18
ATL3-203ENST00000538786 IL5RAQ01344 420 aa13.92□□□□□ -0.18
ATL3-203ENST00000538786 FUT5Q11128 374 aa13.92□□□□□ -0.18
ATL3-203ENST00000538786 LTB4RQ15722 352 aa13.92□□□□□ -0.18
ATL3-203ENST00000538786 LAIR2Q6ISS4 152 aa13.92□□□□□ -0.18
ATL3-203ENST00000538786 Q7L0L9 218 aa13.92□□□□□ -0.18
ATL3-203ENST00000538786 PRSS41Q7RTY9 318 aa13.92□□□□□ -0.18
ATL3-203ENST00000538786 TSPYL5Q86VY4 417 aaPredicted RBP13.92□□□□□ -0.18
ATL3-203ENST00000538786 C19orf47Q8N9M1 422 aaKnown RBP13.92□□□□□ -0.18
ATL3-203ENST00000538786 C1orf216Q8TAB5 229 aa13.92□□□□□ -0.18
ATL3-203ENST00000538786 KAT2AQ92830 837 aa13.92□□□□□ -0.18
ATL3-203ENST00000538786 OTUB1Q96FW1 271 aaPredicted RBP13.92□□□□□ -0.18
ATL3-203ENST00000538786 OR7D2Q96RA2 312 aa13.92□□□□□ -0.18
ATL3-203ENST00000538786 PITX2Q99697 317 aa13.92□□□□□ -0.18
ATL3-203ENST00000538786 BTBD2Q9BX70 525 aa13.92□□□□□ -0.18
ATL3-203ENST00000538786 NPLQ9BXD5 320 aaPredicted RBP13.92□□□□□ -0.18
ATL3-203ENST00000538786 FAM60AQ9NP50 221 aa13.92□□□□□ -0.18
ATL3-203ENST00000538786 PAPOLBQ9NRJ5 636 aaKnown RBP13.92□□□□□ -0.18
ATL3-203ENST00000538786 TMEM74BQ9NUR3 256 aa13.92□□□□□ -0.18
ATL3-203ENST00000538786 NAALAD2Q9Y3Q0 740 aa13.92□□□□□ -0.18
ATL3-203ENST00000538786 COMMD3-BMI1R4GMX3 469 aa13.92□□□□□ -0.18
ATL3-203ENST00000538786 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.92□□□□□ -0.18
ATL3-203ENST00000538786 ARRDC5A6NEK1 342 aa13.92□□□□□ -0.18
ATL3-203ENST00000538786 ZNF860A6NHJ4 632 aa13.92□□□□□ -0.18
ATL3-203ENST00000538786 LILRA5A6NI73 299 aa13.92□□□□□ -0.18
ATL3-203ENST00000538786 H3BSA7 217 aa13.92□□□□□ -0.18
ATL3-203ENST00000538786 CPMP14384 443 aa13.92□□□□□ -0.18
ATL3-203ENST00000538786 CAPZBP47756 277 aa13.92□□□□□ -0.18
ATL3-203ENST00000538786 NXPH1P58417 271 aa13.92□□□□□ -0.18
ATL3-203ENST00000538786 HNRNPKP61978 463 aaKnown RBP eCLIP13.92□□□□□ -0.18
ATL3-203ENST00000538786 CDK5R2Q13319 367 aa13.92□□□□□ -0.18
ATL3-203ENST00000538786 COLEC12Q5KU26 742 aa13.92□□□□□ -0.18
ATL3-203ENST00000538786 PRPF38BQ5VTL8 546 aaKnown RBP13.92□□□□□ -0.18
ATL3-203ENST00000538786 BROXQ5VW32 411 aa13.92□□□□□ -0.18
ATL3-203ENST00000538786 SLC36A4Q6YBV0 504 aa13.92□□□□□ -0.18
ATL3-203ENST00000538786 C17orf82Q86X59 251 aaPredicted RBP13.92□□□□□ -0.18
ATL3-203ENST00000538786 SDR16C5Q8N3Y7 309 aa13.92□□□□□ -0.18
ATL3-203ENST00000538786 OR7G2Q8NG99 324 aa13.92□□□□□ -0.18
ATL3-203ENST00000538786 PHF10Q8WUB8 498 aaKnown RBP13.92□□□□□ -0.18
ATL3-203ENST00000538786 GIMAP5Q96F15 307 aa13.92□□□□□ -0.18
ATL3-203ENST00000538786 ACTRT3Q9BYD9 372 aa13.92□□□□□ -0.18
ATL3-203ENST00000538786 LIPT1Q9Y234 373 aa13.92□□□□□ -0.18
ATL3-203ENST00000538786 POFUT2Q9Y2G5 429 aa13.92□□□□□ -0.18
ATL3-203ENST00000538786 ARHGEF17Q96PE2 2063 aaPredicted RBP13.91□□□□□ -0.18
ATL3-203ENST00000538786 SLC1A7O00341 560 aa13.91□□□□□ -0.18
ATL3-203ENST00000538786 CYR61O00622 381 aa13.91□□□□□ -0.18
ATL3-203ENST00000538786 FFAR1O14842 300 aa13.91□□□□□ -0.18
ATL3-203ENST00000538786 PCDH17O14917 1159 aa13.91□□□□□ -0.18
ATL3-203ENST00000538786 AQP9O43315 295 aa13.91□□□□□ -0.18
ATL3-203ENST00000538786 CCNB2O95067 398 aa13.91□□□□□ -0.18
ATL3-203ENST00000538786 CCDC159P0C7I6 412 aa13.91□□□□□ -0.18
ATL3-203ENST00000538786 AGXTP21549 392 aa13.91□□□□□ -0.18
ATL3-203ENST00000538786 EPHA2P29317 976 aa13.91□□□□□ -0.18
ATL3-203ENST00000538786 RPP38P78345 283 aaKnown RBP13.91□□□□□ -0.18
ATL3-203ENST00000538786 ZP2Q05996 745 aa13.91□□□□□ -0.18
ATL3-203ENST00000538786 GANABQ14697 944 aaKnown RBP13.91□□□□□ -0.18
ATL3-203ENST00000538786 ZBED5Q49AG3 693 aa13.91□□□□□ -0.18
ATL3-203ENST00000538786 GPAT3Q53EU6 434 aa13.91□□□□□ -0.18
ATL3-203ENST00000538786 KCTD8Q6ZWB6 473 aa13.91□□□□□ -0.18
ATL3-203ENST00000538786 GPR141Q7Z602 305 aa13.91□□□□□ -0.18
ATL3-203ENST00000538786 OR4N5Q8IXE1 308 aa13.91□□□□□ -0.18
ATL3-203ENST00000538786 OR2L13Q8N349 312 aa13.91□□□□□ -0.18
ATL3-203ENST00000538786 ZNF566Q969W8 418 aa13.91□□□□□ -0.18
ATL3-203ENST00000538786 COL26A1Q96A83 441 aa13.91□□□□□ -0.18
ATL3-203ENST00000538786 MS4A4EQ96PG1 132 aa13.91□□□□□ -0.18
ATL3-203ENST00000538786 ALPK1Q96QP1 1244 aa13.91□□□□□ -0.18
ATL3-203ENST00000538786 ANKRA2Q9H9E1 313 aa13.91□□□□□ -0.18
ATL3-203ENST00000538786 IL21RQ9HBE5 538 aa13.91□□□□□ -0.18
ATL3-203ENST00000538786 RLIMQ9NVW2 624 aa13.91□□□□□ -0.18
ATL3-203ENST00000538786 CALML5Q9NZT1 146 aa13.91□□□□□ -0.18
ATL3-203ENST00000538786 PTGFRNQ9P2B2 879 aa13.91□□□□□ -0.18
ATL3-203ENST00000538786 HCN4Q9Y3Q4 1203 aa13.91□□□□□ -0.18
ATL3-203ENST00000538786 SLC9B1P1A6NJY1 282 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 DUXAA6NLW8 204 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 LMO7DNF2Z398 122 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 STK25O00506 426 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 HCRTR1O43613 425 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 PROS1P07225 676 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 PORP16435 677 aaPredicted RBP13.9□□□□□ -0.18
ATL3-203ENST00000538786 TTKP33981 857 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 C6orf132Q5T0Z8 1188 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 ATAD3BQ5T9A4 648 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 TCTN3Q6NUS6 607 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 MCATQ8IVS2 390 aaKnown RBP13.9□□□□□ -0.18
ATL3-203ENST00000538786 TMEFF1Q8IYR6 380 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 TAGAPQ8N103 731 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 CA13Q8N1Q1 262 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 OR5T3Q8NGG3 340 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 TANKQ92844 425 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 NMD3Q96D46 503 aaKnown RBP13.9□□□□□ -0.18
ATL3-203ENST00000538786 HRASLS5Q96KN8 279 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms