RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 FGF11Q92914 225 aa17.62■□□□□ 0.41
SFSWAP-207ENST00000538548 HGDQ93099 445 aa17.62■□□□□ 0.41
SFSWAP-207ENST00000538548 PPCDCQ96CD2 204 aa17.62■□□□□ 0.41
SFSWAP-207ENST00000538548 CHFRQ96EP1 664 aa17.62■□□□□ 0.41
SFSWAP-207ENST00000538548 DPCDQ9BVM2 203 aaPredicted RBP17.62■□□□□ 0.41
SFSWAP-207ENST00000538548 EXOSC1Q9Y3B2 195 aaKnown RBP17.62■□□□□ 0.41
SFSWAP-207ENST00000538548 INPPL1O15357 1258 aa17.61■□□□□ 0.41
SFSWAP-207ENST00000538548 GJB5O95377 273 aa17.61■□□□□ 0.41
SFSWAP-207ENST00000538548 ALDH1A1P00352 501 aa17.61■□□□□ 0.41
SFSWAP-207ENST00000538548 HLA-DPB1P04440 258 aa17.61■□□□□ 0.41
SFSWAP-207ENST00000538548 CCND3P30281 292 aaPredicted RBP17.61■□□□□ 0.41
SFSWAP-207ENST00000538548 ATP13A5Q4VNC0 1218 aa17.61■□□□□ 0.41
SFSWAP-207ENST00000538548 PLEKHS1Q5SXH7 462 aa17.61■□□□□ 0.41
SFSWAP-207ENST00000538548 SLC43A3Q8NBI5 491 aa17.61■□□□□ 0.41
SFSWAP-207ENST00000538548 UBL7Q96S82 380 aaPredicted RBP17.61■□□□□ 0.41
SFSWAP-207ENST00000538548 ABCG5Q9H222 651 aa17.61■□□□□ 0.41
SFSWAP-207ENST00000538548 SRRDQ9UH36 339 aa17.61■□□□□ 0.41
SFSWAP-207ENST00000538548 RABL2BQ9UNT1 228 aa17.61■□□□□ 0.41
SFSWAP-207ENST00000538548 PRG3Q9Y2Y8 225 aaPredicted RBP17.61■□□□□ 0.41
SFSWAP-207ENST00000538548 IGLV3-16A0A075B6K0 115 aa17.61■□□□□ 0.41
SFSWAP-207ENST00000538548 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.61■□□□□ 0.41
SFSWAP-207ENST00000538548 MTMR11A4FU01 709 aa17.61■□□□□ 0.41
SFSWAP-207ENST00000538548 SYN3O14994 580 aa17.61■□□□□ 0.41
SFSWAP-207ENST00000538548 SERPINI2O75830 405 aa17.61■□□□□ 0.41
SFSWAP-207ENST00000538548 PAHP00439 452 aa17.61■□□□□ 0.41
SFSWAP-207ENST00000538548 FURINP09958 794 aa17.61■□□□□ 0.41
SFSWAP-207ENST00000538548 SOAT1P35610 550 aa17.61■□□□□ 0.41
SFSWAP-207ENST00000538548 DSC1Q08554 894 aa17.61■□□□□ 0.41
SFSWAP-207ENST00000538548 PDE7AQ13946 482 aa17.61■□□□□ 0.41
SFSWAP-207ENST00000538548 GINS1Q14691 196 aa17.61■□□□□ 0.41
SFSWAP-207ENST00000538548 MPEG1Q2M385 716 aa17.61■□□□□ 0.41
SFSWAP-207ENST00000538548 KIAA1211LQ6NV74 962 aa17.61■□□□□ 0.41
SFSWAP-207ENST00000538548 TSPAN33Q86UF1 283 aa17.61■□□□□ 0.41
SFSWAP-207ENST00000538548 SERINC5Q86VE9 423 aa17.61■□□□□ 0.41
SFSWAP-207ENST00000538548 PLD4Q96BZ4 506 aa17.61■□□□□ 0.41
SFSWAP-207ENST00000538548 RNFT2Q96EX2 444 aa17.61■□□□□ 0.41
SFSWAP-207ENST00000538548 ZSWIM3Q96MP5 696 aa17.61■□□□□ 0.41
SFSWAP-207ENST00000538548 EXTL2Q9UBQ6 330 aa17.61■□□□□ 0.41
SFSWAP-207ENST00000538548 FKBP7Q9Y680 259 aa17.61■□□□□ 0.41
SFSWAP-207ENST00000538548 A8MUA0 341 aa17.6■□□□□ 0.41
SFSWAP-207ENST00000538548 TSPAN4O14817 238 aa17.6■□□□□ 0.41
SFSWAP-207ENST00000538548 PRODHO43272 600 aa17.6■□□□□ 0.41
SFSWAP-207ENST00000538548 APOL3O95236 402 aa17.6■□□□□ 0.41
SFSWAP-207ENST00000538548 ELK1P19419 428 aa17.6■□□□□ 0.41
SFSWAP-207ENST00000538548 RPL3P39023 403 aaKnown RBP17.6■□□□□ 0.41
SFSWAP-207ENST00000538548 OR1G1P47890 313 aa17.6■□□□□ 0.41
SFSWAP-207ENST00000538548 GIPRP48546 466 aa17.6■□□□□ 0.41
SFSWAP-207ENST00000538548 ACLYP53396 1101 aa17.6■□□□□ 0.41
SFSWAP-207ENST00000538548 RAB14P61106 215 aa17.6■□□□□ 0.41
SFSWAP-207ENST00000538548 EFNB1P98172 346 aa17.6■□□□□ 0.41
SFSWAP-207ENST00000538548 COX10Q12887 443 aa17.6■□□□□ 0.41
SFSWAP-207ENST00000538548 ARHGAP15Q53QZ3 475 aa17.6■□□□□ 0.41
SFSWAP-207ENST00000538548 MARCH9Q86YJ5 346 aa17.6■□□□□ 0.41
SFSWAP-207ENST00000538548 ZFP41Q8N8Y5 198 aa17.6■□□□□ 0.41
SFSWAP-207ENST00000538548 TRPV1Q8NER1 839 aa17.6■□□□□ 0.41
SFSWAP-207ENST00000538548 GPR32P1Q8NGA4 272 aa17.6■□□□□ 0.41
SFSWAP-207ENST00000538548 SLC7A13Q8TCU3 470 aa17.6■□□□□ 0.41
SFSWAP-207ENST00000538548 ACOT12Q8WYK0 555 aa17.6■□□□□ 0.41
SFSWAP-207ENST00000538548 RFT1Q96AA3 541 aa17.6■□□□□ 0.41
SFSWAP-207ENST00000538548 PDXPQ96GD0 296 aa17.6■□□□□ 0.41
SFSWAP-207ENST00000538548 TOE1Q96GM8 510 aaKnown RBP17.6■□□□□ 0.41
SFSWAP-207ENST00000538548 RNF32Q9H0A6 362 aa17.6■□□□□ 0.41
SFSWAP-207ENST00000538548 TNFRSF10DQ9UBN6 386 aa17.6■□□□□ 0.41
SFSWAP-207ENST00000538548 MBD1Q9UIS9 605 aaPredicted RBP17.6■□□□□ 0.41
SFSWAP-207ENST00000538548 Q9Y3F1 56 aa17.6■□□□□ 0.41
SFSWAP-207ENST00000538548 RWDD3Q9Y3V2 267 aa17.6■□□□□ 0.41
SFSWAP-207ENST00000538548 SHISA3A0PJX4 238 aa17.6■□□□□ 0.41
SFSWAP-207ENST00000538548 OR6C75A6NL08 312 aa17.6■□□□□ 0.41
SFSWAP-207ENST00000538548 ATP6V1G2-DDX39BF2Z307 99 aa17.6■□□□□ 0.41
SFSWAP-207ENST00000538548 K7ERQ8 282 aa17.6■□□□□ 0.41
SFSWAP-207ENST00000538548 HOXD4P09016 255 aaPredicted RBP17.6■□□□□ 0.41
SFSWAP-207ENST00000538548 LIMS3P0CW19 117 aa17.6■□□□□ 0.41
SFSWAP-207ENST00000538548 LIMS4P0CW20 117 aa17.6■□□□□ 0.41
SFSWAP-207ENST00000538548 SMIM11AP58511 58 aa17.6■□□□□ 0.41
SFSWAP-207ENST00000538548 RPS13P62277 151 aaKnown RBP17.6■□□□□ 0.41
SFSWAP-207ENST00000538548 RAET1GQ6H3X3 334 aa17.6■□□□□ 0.41
SFSWAP-207ENST00000538548 ASB18Q6ZVZ8 466 aa17.6■□□□□ 0.41
SFSWAP-207ENST00000538548 FUZQ9BT04 418 aa17.6■□□□□ 0.41
SFSWAP-207ENST00000538548 NUDT15Q9NV35 164 aa17.6■□□□□ 0.41
SFSWAP-207ENST00000538548 PLXNB3Q9ULL4 1909 aa17.6■□□□□ 0.41
SFSWAP-207ENST00000538548 C5orf58C9J3I9 102 aa17.59■□□□□ 0.41
SFSWAP-207ENST00000538548 NME6O75414 186 aaPredicted RBP17.59■□□□□ 0.41
SFSWAP-207ENST00000538548 STC2O76061 302 aa17.59■□□□□ 0.41
SFSWAP-207ENST00000538548 CCT3P49368 545 aaKnown RBP17.59■□□□□ 0.41
SFSWAP-207ENST00000538548 MC1RQ01726 317 aa17.59■□□□□ 0.41
SFSWAP-207ENST00000538548 RPS26P11Q5JNZ5 115 aaPredicted RBP17.59■□□□□ 0.41
SFSWAP-207ENST00000538548 ACSM5Q6NUN0 579 aa17.59■□□□□ 0.41
SFSWAP-207ENST00000538548 CD300LDQ6UXZ3 194 aa17.59■□□□□ 0.41
SFSWAP-207ENST00000538548 DEF8Q6ZN54 512 aa17.59■□□□□ 0.41
SFSWAP-207ENST00000538548 ZNF485Q8NCK3 441 aa17.59■□□□□ 0.41
SFSWAP-207ENST00000538548 OTUB1Q96FW1 271 aaPredicted RBP17.59■□□□□ 0.41
SFSWAP-207ENST00000538548 ZNF578Q96N58 590 aaPredicted RBP17.59■□□□□ 0.41
SFSWAP-207ENST00000538548 OR2M2Q96R28 347 aa17.59■□□□□ 0.41
SFSWAP-207ENST00000538548 THAP7Q9BT49 309 aaPredicted RBP17.59■□□□□ 0.41
SFSWAP-207ENST00000538548 ACAD8Q9UKU7 415 aa17.59■□□□□ 0.41
SFSWAP-207ENST00000538548 VWA8A3KMH1 1905 aa17.59■□□□□ 0.41
SFSWAP-207ENST00000538548 LANCL1O43813 399 aa17.59■□□□□ 0.41
SFSWAP-207ENST00000538548 MPC2O95563 127 aa17.59■□□□□ 0.41
SFSWAP-207ENST00000538548 BTCP35070 178 aa17.59■□□□□ 0.41
SFSWAP-207ENST00000538548 NNMTP40261 264 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms