RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 DEPDC1Q5TB30 811 aa12.77□□□□□ -0.37
SMARCA4-206ENST00000538456 LRRC70Q7Z2Q7 622 aa12.77□□□□□ -0.37
SMARCA4-206ENST00000538456 MYLK4Q86YV6 388 aaPredicted RBP12.77□□□□□ -0.37
SMARCA4-206ENST00000538456 LAS2Q8IYD9 372 aa12.77□□□□□ -0.37
SMARCA4-206ENST00000538456 PIAS4Q8N2W9 510 aaPredicted RBP12.77□□□□□ -0.37
SMARCA4-206ENST00000538456 PDPRQ8NCN5 879 aa12.77□□□□□ -0.37
SMARCA4-206ENST00000538456 FBXO36Q8NEA4 188 aa12.77□□□□□ -0.37
SMARCA4-206ENST00000538456 FAM83FQ8NEG4 500 aaPredicted RBP12.77□□□□□ -0.37
SMARCA4-206ENST00000538456 ACTRT1Q8TDG2 376 aa12.77□□□□□ -0.37
SMARCA4-206ENST00000538456 INTS12Q96CB8 462 aaKnown RBP12.77□□□□□ -0.37
SMARCA4-206ENST00000538456 LRRC39Q96DD0 335 aa12.77□□□□□ -0.37
SMARCA4-206ENST00000538456 PERPQ96FX8 193 aa12.77□□□□□ -0.37
SMARCA4-206ENST00000538456 OSBPL9Q96SU4 736 aa12.77□□□□□ -0.37
SMARCA4-206ENST00000538456 MTERF1Q99551 399 aaKnown RBP12.77□□□□□ -0.37
SMARCA4-206ENST00000538456 TUBA1CQ9BQE3 449 aa12.77□□□□□ -0.37
SMARCA4-206ENST00000538456 CENPKQ9BS16 269 aa12.77□□□□□ -0.37
SMARCA4-206ENST00000538456 SFXN3Q9BWM7 321 aa12.77□□□□□ -0.37
SMARCA4-206ENST00000538456 CD244Q9BZW8 370 aa12.77□□□□□ -0.37
SMARCA4-206ENST00000538456 METTL7AQ9H8H3 244 aa12.77□□□□□ -0.37
SMARCA4-206ENST00000538456 SNX15Q9NRS6 342 aa12.77□□□□□ -0.37
SMARCA4-206ENST00000538456 RNF112Q9ULX5 631 aa12.77□□□□□ -0.37
SMARCA4-206ENST00000538456 PPP2R2CQ9Y2T4 447 aa12.77□□□□□ -0.37
SMARCA4-206ENST00000538456 MTO1Q9Y2Z2 717 aaKnown RBP12.77□□□□□ -0.37
SMARCA4-206ENST00000538456 IKBKGQ9Y6K9 419 aa12.77□□□□□ -0.37
SMARCA4-206ENST00000538456 STAB1Q9NY15 2570 aa12.76□□□□□ -0.37
SMARCA4-206ENST00000538456 DSCAMO60469 2012 aa12.76□□□□□ -0.37
SMARCA4-206ENST00000538456 PTPN6P29350 595 aa12.76□□□□□ -0.37
SMARCA4-206ENST00000538456 SERPINB1P30740 379 aa12.76□□□□□ -0.37
SMARCA4-206ENST00000538456 GMPRP36959 345 aa12.76□□□□□ -0.37
SMARCA4-206ENST00000538456 ARL4CP56559 192 aa12.76□□□□□ -0.37
SMARCA4-206ENST00000538456 NRG3P56975 720 aa12.76□□□□□ -0.37
SMARCA4-206ENST00000538456 PPP2R2BQ00005 443 aa12.76□□□□□ -0.37
SMARCA4-206ENST00000538456 POU4F1Q01851 419 aa12.76□□□□□ -0.37
SMARCA4-206ENST00000538456 PDIA2Q13087 525 aaKnown RBP12.76□□□□□ -0.37
SMARCA4-206ENST00000538456 SETDB1Q15047 1291 aa12.76□□□□□ -0.37
SMARCA4-206ENST00000538456 NNATQ16517 81 aa12.76□□□□□ -0.37
SMARCA4-206ENST00000538456 TIGD3Q6B0B8 471 aa12.76□□□□□ -0.37
SMARCA4-206ENST00000538456 ANGPTL8Q6UXH0 198 aa12.76□□□□□ -0.37
SMARCA4-206ENST00000538456 CXXC5Q7LFL8 322 aaKnown RBP12.76□□□□□ -0.37
SMARCA4-206ENST00000538456 YTHDF3Q7Z739 585 aaKnown RBP12.76□□□□□ -0.37
SMARCA4-206ENST00000538456 ZCCHC7Q8N3Z6 543 aaKnown RBP12.76□□□□□ -0.37
SMARCA4-206ENST00000538456 SIMC1Q8NDZ2 872 aa12.76□□□□□ -0.37
SMARCA4-206ENST00000538456 OR1J4Q8NGS1 313 aa12.76□□□□□ -0.37
SMARCA4-206ENST00000538456 HUS1BQ8NHY5 278 aa12.76□□□□□ -0.37
SMARCA4-206ENST00000538456 ZPLD1Q8TCW7 415 aa12.76□□□□□ -0.37
SMARCA4-206ENST00000538456 UCN3Q969E3 161 aa12.76□□□□□ -0.37
SMARCA4-206ENST00000538456 TP53INP1Q96A56 240 aa12.76□□□□□ -0.37
SMARCA4-206ENST00000538456 CCL19Q99731 98 aa12.76□□□□□ -0.37
SMARCA4-206ENST00000538456 MCMBPQ9BTE3 642 aa12.76□□□□□ -0.37
SMARCA4-206ENST00000538456 UBTD1Q9HAC8 227 aa12.76□□□□□ -0.37
SMARCA4-206ENST00000538456 MOCS1Q9NZB8 636 aa12.76□□□□□ -0.37
SMARCA4-206ENST00000538456 FBN1P35555 2871 aaKnown RBP12.76□□□□□ -0.37
SMARCA4-206ENST00000538456 A0A1W2PR48 441 aa12.75□□□□□ -0.37
SMARCA4-206ENST00000538456 C2orf72A6NCS6 295 aa12.75□□□□□ -0.37
SMARCA4-206ENST00000538456 TMPRSS11DO60235 418 aa12.75□□□□□ -0.37
SMARCA4-206ENST00000538456 EEDO75530 441 aaKnown RBP12.75□□□□□ -0.37
SMARCA4-206ENST00000538456 AIFM1O95831 613 aa12.75□□□□□ -0.37
SMARCA4-206ENST00000538456 ACTL6AO96019 429 aa12.75□□□□□ -0.37
SMARCA4-206ENST00000538456 KRT15P19012 456 aa12.75□□□□□ -0.37
SMARCA4-206ENST00000538456 GCKP35557 465 aa12.75□□□□□ -0.37
SMARCA4-206ENST00000538456 ATP6V0D1P61421 351 aa12.75□□□□□ -0.37
SMARCA4-206ENST00000538456 RPS13P62277 151 aaKnown RBP12.75□□□□□ -0.37
SMARCA4-206ENST00000538456 RPP38P78345 283 aaKnown RBP12.75□□□□□ -0.37
SMARCA4-206ENST00000538456 PCDH1Q08174 1060 aa12.75□□□□□ -0.37
SMARCA4-206ENST00000538456 E2F2Q14209 437 aa12.75□□□□□ -0.37
SMARCA4-206ENST00000538456 KBTBD12Q3ZCT8 623 aa12.75□□□□□ -0.37
SMARCA4-206ENST00000538456 CYP20A1Q6UW02 462 aa12.75□□□□□ -0.37
SMARCA4-206ENST00000538456 HEATR5AQ86XA9 2040 aa12.75□□□□□ -0.37
SMARCA4-206ENST00000538456 LRRC75A-AS1Q8N1F1 130 aa12.75□□□□□ -0.37
SMARCA4-206ENST00000538456 PIGTQ969N2 578 aa12.75□□□□□ -0.37
SMARCA4-206ENST00000538456 TSPAN17Q96FV3 270 aa12.75□□□□□ -0.37
SMARCA4-206ENST00000538456 TMEM41AQ96HV5 264 aa12.75□□□□□ -0.37
SMARCA4-206ENST00000538456 SECISBP2Q96T21 854 aaKnown RBP12.75□□□□□ -0.37
SMARCA4-206ENST00000538456 TM9SF2Q99805 663 aa12.75□□□□□ -0.37
SMARCA4-206ENST00000538456 BDH2Q9BUT1 245 aa12.75□□□□□ -0.37
SMARCA4-206ENST00000538456 ALG9Q9H6U8 611 aa12.75□□□□□ -0.37
SMARCA4-206ENST00000538456 CXorf21Q9HAI6 301 aa12.75□□□□□ -0.37
SMARCA4-206ENST00000538456 SMYD2Q9NRG4 433 aa12.75□□□□□ -0.37
SMARCA4-206ENST00000538456 KLHL28Q9NXS3 571 aa12.75□□□□□ -0.37
SMARCA4-206ENST00000538456 NSMCE4AQ9NXX6 385 aa12.75□□□□□ -0.37
SMARCA4-206ENST00000538456 OPTCQ9UBM4 332 aa12.75□□□□□ -0.37
SMARCA4-206ENST00000538456 NDRG3Q9UGV2 375 aa12.75□□□□□ -0.37
SMARCA4-206ENST00000538456 MAPRE3Q9UPY8 281 aa12.75□□□□□ -0.37
SMARCA4-206ENST00000538456 TESMINQ9Y4I5 508 aa12.75□□□□□ -0.37
SMARCA4-206ENST00000538456 ASB4Q9Y574 426 aa12.75□□□□□ -0.37
SMARCA4-206ENST00000538456 A0A0A6YYD5 115 aa12.74□□□□□ -0.37
SMARCA4-206ENST00000538456 SUPT3HB4E1H0 165 aa12.74□□□□□ -0.37
SMARCA4-206ENST00000538456 SNPHO15079 494 aa12.74□□□□□ -0.37
SMARCA4-206ENST00000538456 SIAH2O43255 324 aa12.74□□□□□ -0.37
SMARCA4-206ENST00000538456 SUPT3HO75486 399 aa12.74□□□□□ -0.37
SMARCA4-206ENST00000538456 RCBTB2O95199 551 aa12.74□□□□□ -0.37
SMARCA4-206ENST00000538456 GBAP04062 536 aa12.74□□□□□ -0.37
SMARCA4-206ENST00000538456 CT62P0C5K7 136 aa12.74□□□□□ -0.37
SMARCA4-206ENST00000538456 FAM58BPP0C7Q3 252 aa12.74□□□□□ -0.37
SMARCA4-206ENST00000538456 SLC35E2BP0CK96 405 aa12.74□□□□□ -0.37
SMARCA4-206ENST00000538456 SLC35E2P0CK97 266 aa12.74□□□□□ -0.37
SMARCA4-206ENST00000538456 EPB42P16452 691 aa12.74□□□□□ -0.37
SMARCA4-206ENST00000538456 STMN1P16949 149 aa12.74□□□□□ -0.37
SMARCA4-206ENST00000538456 ABCD3P28288 659 aa12.74□□□□□ -0.37
SMARCA4-206ENST00000538456 DIO3P55073 304 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms