RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 ZNF24P17028 368 aa16.54■□□□□ 0.24
TNFRSF1A-209ENST00000536717 ERVK-8P63133 956 aa16.54■□□□□ 0.24
TNFRSF1A-209ENST00000536717 GUCY1A3Q02108 690 aa16.54■□□□□ 0.24
TNFRSF1A-209ENST00000536717 TBL3Q12788 808 aaKnown RBP16.54■□□□□ 0.24
TNFRSF1A-209ENST00000536717 RGS9BPQ6ZS82 235 aa16.54■□□□□ 0.24
TNFRSF1A-209ENST00000536717 PAGE2Q7Z2X7 111 aa16.54■□□□□ 0.24
TNFRSF1A-209ENST00000536717 GPALPP1Q8IXQ4 340 aa16.54■□□□□ 0.24
TNFRSF1A-209ENST00000536717 DDIASQ8IXT1 998 aa16.54■□□□□ 0.24
TNFRSF1A-209ENST00000536717 PSD4Q8NDX1 1056 aa16.54■□□□□ 0.24
TNFRSF1A-209ENST00000536717 OR5L2Q8NGL0 311 aa16.54■□□□□ 0.24
TNFRSF1A-209ENST00000536717 NUBPLQ8TB37 319 aa16.54■□□□□ 0.24
TNFRSF1A-209ENST00000536717 C7orf26Q96N11 449 aa16.54■□□□□ 0.24
TNFRSF1A-209ENST00000536717 CCT7Q99832 543 aa16.54■□□□□ 0.24
TNFRSF1A-209ENST00000536717 PELOQ9BRX2 385 aaKnown RBP16.54■□□□□ 0.24
TNFRSF1A-209ENST00000536717 ACPTQ9BZG2 426 aa16.54■□□□□ 0.24
TNFRSF1A-209ENST00000536717 DEPPQ9NTK1 212 aa16.54■□□□□ 0.24
TNFRSF1A-209ENST00000536717 ERVK-11Q9UQG0 969 aa16.54■□□□□ 0.24
TNFRSF1A-209ENST00000536717 ERVK-19Q9WJR5 959 aa16.54■□□□□ 0.24
TNFRSF1A-209ENST00000536717 ARHGAP10A1A4S6 786 aa16.53■□□□□ 0.24
TNFRSF1A-209ENST00000536717 KLRC4-KLRK1H3BQV0 150 aa16.53■□□□□ 0.24
TNFRSF1A-209ENST00000536717 RGS14O43566 566 aa16.53■□□□□ 0.24
TNFRSF1A-209ENST00000536717 ASNA1O43681 348 aa16.53■□□□□ 0.24
TNFRSF1A-209ENST00000536717 PEX1O43933 1283 aa16.53■□□□□ 0.24
TNFRSF1A-209ENST00000536717 ZG16O60844 167 aa16.53■□□□□ 0.24
TNFRSF1A-209ENST00000536717 SKAP2O75563 359 aaPredicted RBP16.53■□□□□ 0.24
TNFRSF1A-209ENST00000536717 MDH1P40925 334 aaKnown RBP16.53■□□□□ 0.24
TNFRSF1A-209ENST00000536717 CA7P43166 264 aa16.53■□□□□ 0.24
TNFRSF1A-209ENST00000536717 PER3P56645 1201 aa16.53■□□□□ 0.24
TNFRSF1A-209ENST00000536717 GPR85P60893 370 aa16.53■□□□□ 0.24
TNFRSF1A-209ENST00000536717 HMGCS1Q01581 520 aa16.53■□□□□ 0.24
TNFRSF1A-209ENST00000536717 CCNYL2Q5T2Q4 361 aa16.53■□□□□ 0.24
TNFRSF1A-209ENST00000536717 NDUFAF5Q5TEU4 345 aa16.53■□□□□ 0.24
TNFRSF1A-209ENST00000536717 MAMDC2Q7Z304 686 aaPredicted RBP16.53■□□□□ 0.24
TNFRSF1A-209ENST00000536717 ZFP62Q8NB50 900 aaPredicted RBP16.53■□□□□ 0.24
TNFRSF1A-209ENST00000536717 POGLUT1Q8NBL1 392 aa16.53■□□□□ 0.24
TNFRSF1A-209ENST00000536717 PIWIL2Q8TC59 973 aaKnown RBP16.53■□□□□ 0.24
TNFRSF1A-209ENST00000536717 ART5Q96L15 291 aa16.53■□□□□ 0.24
TNFRSF1A-209ENST00000536717 CNPPD1Q9BV87 410 aa16.53■□□□□ 0.24
TNFRSF1A-209ENST00000536717 TUBB1Q9H4B7 451 aa16.53■□□□□ 0.24
TNFRSF1A-209ENST00000536717 TIMMDC1Q9NPL8 285 aa16.53■□□□□ 0.24
TNFRSF1A-209ENST00000536717 PNPOQ9NVS9 261 aa16.53■□□□□ 0.24
TNFRSF1A-209ENST00000536717 TRGV8A0A0C4DH27 118 aa16.52■□□□□ 0.24
TNFRSF1A-209ENST00000536717 SLCO1B7G3V0H7 640 aa16.52■□□□□ 0.24
TNFRSF1A-209ENST00000536717 PIP5K1BO14986 540 aa16.52■□□□□ 0.24
TNFRSF1A-209ENST00000536717 DYRK3O43781 588 aa16.52■□□□□ 0.24
TNFRSF1A-209ENST00000536717 OR10H2O60403 315 aa16.52■□□□□ 0.24
TNFRSF1A-209ENST00000536717 SLC19A2O60779 497 aa16.52■□□□□ 0.24
TNFRSF1A-209ENST00000536717 CLPSP04118 112 aa16.52■□□□□ 0.24
TNFRSF1A-209ENST00000536717 LINC00032P0C843 101 aa16.52■□□□□ 0.24
TNFRSF1A-209ENST00000536717 SLC35E2P0CK97 266 aa16.52■□□□□ 0.24
TNFRSF1A-209ENST00000536717 GALNSP34059 522 aa16.52■□□□□ 0.24
TNFRSF1A-209ENST00000536717 RFC3P40938 356 aa16.52■□□□□ 0.24
TNFRSF1A-209ENST00000536717 MAPK12P53778 367 aa16.52■□□□□ 0.24
TNFRSF1A-209ENST00000536717 RBPJQ06330 500 aa16.52■□□□□ 0.24
TNFRSF1A-209ENST00000536717 ZNF267Q14586 743 aaPredicted RBP16.52■□□□□ 0.24
TNFRSF1A-209ENST00000536717 PDCD2Q16342 344 aaPredicted RBP16.52■□□□□ 0.24
TNFRSF1A-209ENST00000536717 MPEG1Q2M385 716 aa16.52■□□□□ 0.24
TNFRSF1A-209ENST00000536717 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.52■□□□□ 0.24
TNFRSF1A-209ENST00000536717 ZNF750Q32MQ0 723 aa16.52■□□□□ 0.24
TNFRSF1A-209ENST00000536717 SPDYAQ5MJ70 313 aa16.52■□□□□ 0.24
TNFRSF1A-209ENST00000536717 CHERPQ8IWX8 916 aaKnown RBP16.52■□□□□ 0.24
TNFRSF1A-209ENST00000536717 C16orf52Q8NHV5 167 aa16.52■□□□□ 0.24
TNFRSF1A-209ENST00000536717 RIT1Q92963 219 aa16.52■□□□□ 0.24
TNFRSF1A-209ENST00000536717 SLCO1B3Q9NPD5 702 aa16.52■□□□□ 0.24
TNFRSF1A-209ENST00000536717 MARCOQ9UEW3 520 aaPredicted RBP16.52■□□□□ 0.24
TNFRSF1A-209ENST00000536717 ZNF835Q9Y2P0 537 aa16.52■□□□□ 0.24
TNFRSF1A-209ENST00000536717 CELSR2Q9HCU4 2923 aa16.52■□□□□ 0.23
TNFRSF1A-209ENST00000536717 ZNHIT1O43257 154 aa16.51■□□□□ 0.23
TNFRSF1A-209ENST00000536717 RSL1D1O76021 490 aaKnown RBP16.51■□□□□ 0.23
TNFRSF1A-209ENST00000536717 KITP10721 976 aa16.51■□□□□ 0.23
TNFRSF1A-209ENST00000536717 PIK3R1P27986 724 aa16.51■□□□□ 0.23
TNFRSF1A-209ENST00000536717 SLC37A1P57057 533 aa16.51■□□□□ 0.23
TNFRSF1A-209ENST00000536717 HSF1Q00613 529 aa16.51■□□□□ 0.23
TNFRSF1A-209ENST00000536717 SPIN4Q56A73 249 aa16.51■□□□□ 0.23
TNFRSF1A-209ENST00000536717 PIGGQ5H8A4 983 aa16.51■□□□□ 0.23
TNFRSF1A-209ENST00000536717 FAM47EQ6ZV65 393 aa16.51■□□□□ 0.23
TNFRSF1A-209ENST00000536717 MMP21Q8N119 569 aa16.51■□□□□ 0.23
TNFRSF1A-209ENST00000536717 C1orf52Q8N6N3 182 aaKnown RBP16.51■□□□□ 0.23
TNFRSF1A-209ENST00000536717 TM4SF18Q96CE8 201 aa16.51■□□□□ 0.23
TNFRSF1A-209ENST00000536717 CXorf21Q9HAI6 301 aa16.51■□□□□ 0.23
TNFRSF1A-209ENST00000536717 SH3BGRL2Q9UJC5 107 aa16.51■□□□□ 0.23
TNFRSF1A-209ENST00000536717 CES1P1Q9UKY3 287 aa16.51■□□□□ 0.23
TNFRSF1A-209ENST00000536717 PCDHA9Q9Y5H5 950 aa16.51■□□□□ 0.23
TNFRSF1A-209ENST00000536717 PTGDR2Q9Y5Y4 395 aa16.51■□□□□ 0.23
TNFRSF1A-209ENST00000536717 A0A0G2JMM0 328 aa16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 A0A1W2PPB8 328 aa16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 A0A1W2PRS3 328 aa16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 PINLYPA6NC86 204 aa16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 KIR3DP1A8MWS1 328 aa16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 HDAC3O15379 428 aa16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 HS6ST1O60243 411 aa16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 NADKO95544 446 aaPredicted RBP16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 CT62P0C5K7 136 aa16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 COL8A1P27658 744 aa16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 BTKQ06187 659 aa16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 ACSM2AQ08AH3 577 aa16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 C3AR1Q16581 482 aa16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 ACSM2BQ68CK6 577 aa16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 OPN5Q6U736 354 aa16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 LYPD8Q6UX82 237 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms