RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 SPCS2Q15005 226 aa12.23□□□□□ -0.45
CDK5RAP3-202ENST00000536708 MAD2L1BPQ15013 274 aaPredicted RBP12.23□□□□□ -0.45
CDK5RAP3-202ENST00000536708 SF3A2Q15428 464 aaKnown RBP12.23□□□□□ -0.45
CDK5RAP3-202ENST00000536708 HIST2H2ACQ16777 129 aaPredicted RBP12.23□□□□□ -0.45
CDK5RAP3-202ENST00000536708 AMZ1Q400G9 498 aa12.23□□□□□ -0.45
CDK5RAP3-202ENST00000536708 HIST2H2AA3Q6FI13 130 aa12.23□□□□□ -0.45
CDK5RAP3-202ENST00000536708 RABEPKQ7Z6M1 372 aa12.23□□□□□ -0.45
CDK5RAP3-202ENST00000536708 SVOPQ8N4V2 548 aa12.23□□□□□ -0.45
CDK5RAP3-202ENST00000536708 PRSS33Q8NF86 280 aa12.23□□□□□ -0.45
CDK5RAP3-202ENST00000536708 IPCEF1Q8WWN9 437 aaPredicted RBP12.23□□□□□ -0.45
CDK5RAP3-202ENST00000536708 RORBQ92753 470 aa12.23□□□□□ -0.45
CDK5RAP3-202ENST00000536708 CCDC74AQ96AQ1 378 aa12.23□□□□□ -0.45
CDK5RAP3-202ENST00000536708 SLC22A18Q96BI1 424 aa12.23□□□□□ -0.45
CDK5RAP3-202ENST00000536708 VMP1Q96GC9 406 aa12.23□□□□□ -0.45
CDK5RAP3-202ENST00000536708 DOHHQ9BU89 302 aa12.23□□□□□ -0.45
CDK5RAP3-202ENST00000536708 DGCR6LQ9BY27 220 aa12.23□□□□□ -0.45
CDK5RAP3-202ENST00000536708 NECTIN3Q9NQS3 549 aa12.23□□□□□ -0.45
CDK5RAP3-202ENST00000536708 RXFP3Q9NSD7 469 aa12.23□□□□□ -0.45
CDK5RAP3-202ENST00000536708 EXD2Q9NVH0 621 aa12.23□□□□□ -0.45
CDK5RAP3-202ENST00000536708 FAM86C1Q9NVL1 165 aa12.23□□□□□ -0.45
CDK5RAP3-202ENST00000536708 THUMPD1Q9NXG2 353 aaKnown RBP12.23□□□□□ -0.45
CDK5RAP3-202ENST00000536708 WARS2Q9UGM6 360 aaKnown RBP12.23□□□□□ -0.45
CDK5RAP3-202ENST00000536708 VPS4AQ9UN37 437 aa12.23□□□□□ -0.45
CDK5RAP3-202ENST00000536708 TSC22D4Q9Y3Q8 395 aa12.23□□□□□ -0.45
CDK5RAP3-202ENST00000536708 PCDHGB3Q9Y5G1 929 aa12.23□□□□□ -0.45
CDK5RAP3-202ENST00000536708 WDFY3Q8IZQ1 3526 aa12.22□□□□□ -0.45
CDK5RAP3-202ENST00000536708 A0A0J9YY10 115 aa12.22□□□□□ -0.45
CDK5RAP3-202ENST00000536708 TRBC2A0A5B9 178 aa12.22□□□□□ -0.45
CDK5RAP3-202ENST00000536708 MYO1GB0I1T2 1018 aa12.22□□□□□ -0.45
CDK5RAP3-202ENST00000536708 RTCAO00442 366 aaKnown RBP12.22□□□□□ -0.45
CDK5RAP3-202ENST00000536708 ZW10O43264 779 aa12.22□□□□□ -0.45
CDK5RAP3-202ENST00000536708 SUV39H1O43463 412 aa12.22□□□□□ -0.45
CDK5RAP3-202ENST00000536708 NUDT21O43809 227 aaKnown RBP12.22□□□□□ -0.45
CDK5RAP3-202ENST00000536708 GCM2O75603 506 aaPredicted RBP12.22□□□□□ -0.45
CDK5RAP3-202ENST00000536708 MVDP53602 400 aa12.22□□□□□ -0.45
CDK5RAP3-202ENST00000536708 RBBP4Q09028 425 aa12.22□□□□□ -0.45
CDK5RAP3-202ENST00000536708 TCF15Q12870 199 aa12.22□□□□□ -0.45
CDK5RAP3-202ENST00000536708 PDE7AQ13946 482 aa12.22□□□□□ -0.45
CDK5RAP3-202ENST00000536708 TRIM16LQ309B1 348 aa12.22□□□□□ -0.45
CDK5RAP3-202ENST00000536708 PROX2Q3B8N5 592 aa12.22□□□□□ -0.45
CDK5RAP3-202ENST00000536708 PLA2G2CQ5R387 149 aa12.22□□□□□ -0.45
CDK5RAP3-202ENST00000536708 PERM1Q5SV97 790 aa12.22□□□□□ -0.45
CDK5RAP3-202ENST00000536708 FRMPD2BQ6IN97 320 aa12.22□□□□□ -0.45
CDK5RAP3-202ENST00000536708 CCDC80Q76M96 950 aa12.22□□□□□ -0.45
CDK5RAP3-202ENST00000536708 VN1R4Q7Z5H5 301 aa12.22□□□□□ -0.45
CDK5RAP3-202ENST00000536708 PARP8Q8N3A8 854 aa12.22□□□□□ -0.45
CDK5RAP3-202ENST00000536708 TMCO5AQ8N6Q1 288 aa12.22□□□□□ -0.45
CDK5RAP3-202ENST00000536708 C11orf65Q8NCR3 313 aa12.22□□□□□ -0.45
CDK5RAP3-202ENST00000536708 HRASLS5Q96KN8 279 aa12.22□□□□□ -0.45
CDK5RAP3-202ENST00000536708 TGM7Q96PF1 710 aa12.22□□□□□ -0.45
CDK5RAP3-202ENST00000536708 F2RL3Q96RI0 385 aa12.22□□□□□ -0.45
CDK5RAP3-202ENST00000536708 MAP3K3Q99759 626 aa12.22□□□□□ -0.45
CDK5RAP3-202ENST00000536708 MS4A8Q9BY19 250 aa12.22□□□□□ -0.45
CDK5RAP3-202ENST00000536708 REEP4Q9H6H4 257 aa12.22□□□□□ -0.45
CDK5RAP3-202ENST00000536708 KRT84Q9NSB2 600 aa12.22□□□□□ -0.45
CDK5RAP3-202ENST00000536708 TMEM184CQ9NVA4 438 aa12.22□□□□□ -0.45
CDK5RAP3-202ENST00000536708 ERVK-18Q9QC07 812 aa12.22□□□□□ -0.45
CDK5RAP3-202ENST00000536708 IGHV1OR21-1A0A087WYE8 117 aa12.21□□□□□ -0.45
CDK5RAP3-202ENST00000536708 ANKDD1BA6NHY2 528 aa12.21□□□□□ -0.45
CDK5RAP3-202ENST00000536708 A8MVJ9 347 aa12.21□□□□□ -0.45
CDK5RAP3-202ENST00000536708 SLC22A1O15245 554 aa12.21□□□□□ -0.45
CDK5RAP3-202ENST00000536708 CAPN5O15484 640 aaPredicted RBP12.21□□□□□ -0.45
CDK5RAP3-202ENST00000536708 P2RX6O15547 441 aa12.21□□□□□ -0.45
CDK5RAP3-202ENST00000536708 NDUFS4O43181 175 aa12.21□□□□□ -0.45
CDK5RAP3-202ENST00000536708 PCDH7O60245 1069 aa12.21□□□□□ -0.45
CDK5RAP3-202ENST00000536708 TNFRSF21O75509 655 aa12.21□□□□□ -0.45
CDK5RAP3-202ENST00000536708 DIRAS1O95057 198 aa12.21□□□□□ -0.45
CDK5RAP3-202ENST00000536708 CTSBP07858 339 aa12.21□□□□□ -0.45
CDK5RAP3-202ENST00000536708 NUDT7P0C024 238 aa12.21□□□□□ -0.45
CDK5RAP3-202ENST00000536708 PTX3P26022 381 aaPredicted RBP12.21□□□□□ -0.45
CDK5RAP3-202ENST00000536708 IDUAP35475 653 aa12.21□□□□□ -0.45
CDK5RAP3-202ENST00000536708 RPL3P39023 403 aaKnown RBP12.21□□□□□ -0.45
CDK5RAP3-202ENST00000536708 OPRL1P41146 370 aa12.21□□□□□ -0.45
CDK5RAP3-202ENST00000536708 PIK3CBP42338 1070 aa12.21□□□□□ -0.45
CDK5RAP3-202ENST00000536708 SELENOWP63302 87 aa12.21□□□□□ -0.45
CDK5RAP3-202ENST00000536708 CFHR1Q03591 330 aa12.21□□□□□ -0.45
CDK5RAP3-202ENST00000536708 ZNF763Q0D2J5 394 aa12.21□□□□□ -0.45
CDK5RAP3-202ENST00000536708 NPRL3Q12980 569 aa12.21□□□□□ -0.45
CDK5RAP3-202ENST00000536708 GAB1Q13480 694 aa12.21□□□□□ -0.45
CDK5RAP3-202ENST00000536708 LAPTM4AQ15012 233 aa12.21□□□□□ -0.45
CDK5RAP3-202ENST00000536708 MLIPQ5VWP3 458 aa12.21□□□□□ -0.45
CDK5RAP3-202ENST00000536708 ARMC6Q6NXE6 501 aa12.21□□□□□ -0.45
CDK5RAP3-202ENST00000536708 FIGLAQ6QHK4 219 aa12.21□□□□□ -0.45
CDK5RAP3-202ENST00000536708 PRSS48Q7RTY5 328 aa12.21□□□□□ -0.45
CDK5RAP3-202ENST00000536708 TSEN54Q7Z6J9 526 aaKnown RBP12.21□□□□□ -0.45
CDK5RAP3-202ENST00000536708 GALNT10Q86SR1 603 aa12.21□□□□□ -0.45
CDK5RAP3-202ENST00000536708 AVL9Q8NBF6 648 aa12.21□□□□□ -0.45
CDK5RAP3-202ENST00000536708 CDC26Q8NHZ8 85 aa12.21□□□□□ -0.45
CDK5RAP3-202ENST00000536708 WDR48Q8TAF3 677 aa12.21□□□□□ -0.45
CDK5RAP3-202ENST00000536708 CREB3L4Q8TEY5 395 aa12.21□□□□□ -0.45
CDK5RAP3-202ENST00000536708 TAMM41Q96BW9 452 aa12.21□□□□□ -0.45
CDK5RAP3-202ENST00000536708 ALPK1Q96QP1 1244 aa12.21□□□□□ -0.45
CDK5RAP3-202ENST00000536708 ZNF347Q96SE7 839 aa12.21□□□□□ -0.45
CDK5RAP3-202ENST00000536708 LRFN3Q9BTN0 628 aa12.21□□□□□ -0.45
CDK5RAP3-202ENST00000536708 MROQ9BYG7 248 aa12.21□□□□□ -0.45
CDK5RAP3-202ENST00000536708 CCDC90BQ9GZT6 254 aa12.21□□□□□ -0.45
CDK5RAP3-202ENST00000536708 RHBGQ9H310 441 aa12.21□□□□□ -0.45
CDK5RAP3-202ENST00000536708 TMEM38AQ9H6F2 299 aa12.21□□□□□ -0.45
CDK5RAP3-202ENST00000536708 UCK1Q9HA47 277 aa12.21□□□□□ -0.45
CDK5RAP3-202ENST00000536708 FAM60AQ9NP50 221 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms