RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 RASA2Q15283 850 aa13.14□□□□□ -0.31
RTN3P1-201ENST00000536295 NNATQ16517 81 aa13.14□□□□□ -0.31
RTN3P1-201ENST00000536295 NTRK2Q16620 822 aa13.14□□□□□ -0.31
RTN3P1-201ENST00000536295 BICRALQ6AI39 1079 aa13.14□□□□□ -0.31
RTN3P1-201ENST00000536295 FAM111BQ6SJ93 734 aa13.14□□□□□ -0.31
RTN3P1-201ENST00000536295 ZNF615Q8N8J6 731 aa13.14□□□□□ -0.31
RTN3P1-201ENST00000536295 LRRN4CLQ8ND94 238 aa13.14□□□□□ -0.31
RTN3P1-201ENST00000536295 OR10Q1Q8NGQ4 319 aa13.14□□□□□ -0.31
RTN3P1-201ENST00000536295 METTL6Q8TCB7 284 aa13.14□□□□□ -0.31
RTN3P1-201ENST00000536295 ASB5Q8WWX0 329 aa13.14□□□□□ -0.31
RTN3P1-201ENST00000536295 DIO2Q92813 273 aa13.14□□□□□ -0.31
RTN3P1-201ENST00000536295 TM4SF18Q96CE8 201 aa13.14□□□□□ -0.31
RTN3P1-201ENST00000536295 KLHL29Q96CT2 875 aa13.14□□□□□ -0.31
RTN3P1-201ENST00000536295 TRIM44Q96DX7 344 aaPredicted RBP13.14□□□□□ -0.31
RTN3P1-201ENST00000536295 TRIM8Q9BZR9 551 aa13.14□□□□□ -0.31
RTN3P1-201ENST00000536295 ZNF703Q9H7S9 590 aaPredicted RBP13.14□□□□□ -0.31
RTN3P1-201ENST00000536295 PROK2Q9HC23 129 aa13.14□□□□□ -0.31
RTN3P1-201ENST00000536295 ALKBH4Q9NXW9 302 aa13.14□□□□□ -0.31
RTN3P1-201ENST00000536295 VPS29Q9UBQ0 182 aa13.14□□□□□ -0.31
RTN3P1-201ENST00000536295 BCAP29Q9UHQ4 241 aa13.14□□□□□ -0.31
RTN3P1-201ENST00000536295 CES1P1Q9UKY3 287 aa13.14□□□□□ -0.31
RTN3P1-201ENST00000536295 CNOT11Q9UKZ1 510 aaKnown RBP13.14□□□□□ -0.31
RTN3P1-201ENST00000536295 NPFFR2Q9Y5X5 522 aa13.14□□□□□ -0.31
RTN3P1-201ENST00000536295 ZNF407Q9C0G0 2248 aa13.13□□□□□ -0.31
RTN3P1-201ENST00000536295 A0A1B0GVC2 190 aa13.13□□□□□ -0.31
RTN3P1-201ENST00000536295 NKX2-6A6NCS4 301 aa13.13□□□□□ -0.31
RTN3P1-201ENST00000536295 LRRC3CA6NJW4 275 aa13.13□□□□□ -0.31
RTN3P1-201ENST00000536295 FIGNL2A6NMB9 653 aa13.13□□□□□ -0.31
RTN3P1-201ENST00000536295 CAPN14A8MX76 684 aa13.13□□□□□ -0.31
RTN3P1-201ENST00000536295 FOXO6A8MYZ6 492 aa13.13□□□□□ -0.31
RTN3P1-201ENST00000536295 TP53I11O14683 189 aa13.13□□□□□ -0.31
RTN3P1-201ENST00000536295 SUSD5O60279 629 aa13.13□□□□□ -0.31
RTN3P1-201ENST00000536295 ULK1O75385 1050 aa13.13□□□□□ -0.31
RTN3P1-201ENST00000536295 IMPDH1P20839 514 aa13.13□□□□□ -0.31
RTN3P1-201ENST00000536295 ACVR2AP27037 513 aa13.13□□□□□ -0.31
RTN3P1-201ENST00000536295 CHRNB4P30926 498 aa13.13□□□□□ -0.31
RTN3P1-201ENST00000536295 TRPC1P48995 793 aa13.13□□□□□ -0.31
RTN3P1-201ENST00000536295 HTR6P50406 440 aa13.13□□□□□ -0.31
RTN3P1-201ENST00000536295 NRG3P56975 720 aa13.13□□□□□ -0.31
RTN3P1-201ENST00000536295 EXOSC7Q15024 291 aaKnown RBP13.13□□□□□ -0.31
RTN3P1-201ENST00000536295 RPS6KA2Q15349 733 aa13.13□□□□□ -0.31
RTN3P1-201ENST00000536295 LCA5Q86VQ0 697 aa13.13□□□□□ -0.31
RTN3P1-201ENST00000536295 SLC22A9Q8IVM8 553 aa13.13□□□□□ -0.31
RTN3P1-201ENST00000536295 ZNF295-AS1Q8N0V1 137 aa13.13□□□□□ -0.31
RTN3P1-201ENST00000536295 VWA5B2Q8N398 1253 aa13.13□□□□□ -0.31
RTN3P1-201ENST00000536295 ADCY4Q8NFM4 1077 aa13.13□□□□□ -0.31
RTN3P1-201ENST00000536295 OR7G1Q8NGA0 311 aa13.13□□□□□ -0.31
RTN3P1-201ENST00000536295 ADIPOR1Q96A54 375 aa13.13□□□□□ -0.31
RTN3P1-201ENST00000536295 TP53INP1Q96A56 240 aa13.13□□□□□ -0.31
RTN3P1-201ENST00000536295 SARAFQ96BY9 339 aa13.13□□□□□ -0.31
RTN3P1-201ENST00000536295 ZNF382Q96SR6 550 aa13.13□□□□□ -0.31
RTN3P1-201ENST00000536295 FAIM2Q9BWQ8 316 aa13.13□□□□□ -0.31
RTN3P1-201ENST00000536295 TXLNGYQ9BZA5 131 aa13.13□□□□□ -0.31
RTN3P1-201ENST00000536295 UCK2Q9BZX2 261 aa13.13□□□□□ -0.31
RTN3P1-201ENST00000536295 SLC6A15Q9H2J7 730 aa13.13□□□□□ -0.31
RTN3P1-201ENST00000536295 EPB41L4BQ9H329 900 aa13.13□□□□□ -0.31
RTN3P1-201ENST00000536295 PFDN4Q9NQP4 134 aa13.13□□□□□ -0.31
RTN3P1-201ENST00000536295 SPRR3Q9UBC9 169 aa13.13□□□□□ -0.31
RTN3P1-201ENST00000536295 B4GALT7Q9UBV7 327 aa13.13□□□□□ -0.31
RTN3P1-201ENST00000536295 PSME2Q9UL46 239 aa13.13□□□□□ -0.31
RTN3P1-201ENST00000536295 DTX4Q9Y2E6 619 aa13.13□□□□□ -0.31
RTN3P1-201ENST00000536295 CREBBPQ92793 2442 aa13.13□□□□□ -0.31
RTN3P1-201ENST00000536295 MYO9AB2RTY4 2548 aa13.12□□□□□ -0.31
RTN3P1-201ENST00000536295 LRBAP50851 2863 aa13.12□□□□□ -0.31
RTN3P1-201ENST00000536295 A0A1W2PPM1 405 aa13.12□□□□□ -0.31
RTN3P1-201ENST00000536295 HCN1O60741 890 aa13.12□□□□□ -0.31
RTN3P1-201ENST00000536295 HSD3B1P14060 373 aa13.12□□□□□ -0.31
RTN3P1-201ENST00000536295 KRT15P19012 456 aa13.12□□□□□ -0.31
RTN3P1-201ENST00000536295 CSNK2A2P19784 350 aaPredicted RBP13.12□□□□□ -0.31
RTN3P1-201ENST00000536295 ENDOUP21128 410 aaKnown RBP13.12□□□□□ -0.31
RTN3P1-201ENST00000536295 S1PR1P21453 382 aa13.12□□□□□ -0.31
RTN3P1-201ENST00000536295 GPX3P22352 226 aa13.12□□□□□ -0.31
RTN3P1-201ENST00000536295 HSD3B2P26439 372 aa13.12□□□□□ -0.31
RTN3P1-201ENST00000536295 GDF1P27539 372 aa13.12□□□□□ -0.31
RTN3P1-201ENST00000536295 TMED10P49755 219 aaKnown RBP13.12□□□□□ -0.31
RTN3P1-201ENST00000536295 PRKAA2P54646 552 aa13.12□□□□□ -0.31
RTN3P1-201ENST00000536295 HMGCS1Q01581 520 aa13.12□□□□□ -0.31
RTN3P1-201ENST00000536295 DUSP2Q05923 314 aa13.12□□□□□ -0.31
RTN3P1-201ENST00000536295 BTKQ06187 659 aa13.12□□□□□ -0.31
RTN3P1-201ENST00000536295 CSTF3Q12996 717 aaKnown RBP13.12□□□□□ -0.31
RTN3P1-201ENST00000536295 LCP2Q13094 533 aa13.12□□□□□ -0.31
RTN3P1-201ENST00000536295 LTB4RQ15722 352 aa13.12□□□□□ -0.31
RTN3P1-201ENST00000536295 PRICKLE4Q2TBC4 344 aa13.12□□□□□ -0.31
RTN3P1-201ENST00000536295 WLSQ5T9L3 541 aa13.12□□□□□ -0.31
RTN3P1-201ENST00000536295 TMEM198Q66K66 360 aa13.12□□□□□ -0.31
RTN3P1-201ENST00000536295 SCIMPQ6UWF3 145 aa13.12□□□□□ -0.31
RTN3P1-201ENST00000536295 B3GNT6Q6ZMB0 384 aa13.12□□□□□ -0.31
RTN3P1-201ENST00000536295 MEX3BQ6ZN04 569 aaKnown RBP13.12□□□□□ -0.31
RTN3P1-201ENST00000536295 ACAD11Q709F0 780 aa13.12□□□□□ -0.31
RTN3P1-201ENST00000536295 LRRC25Q8N386 305 aaPredicted RBP13.12□□□□□ -0.31
RTN3P1-201ENST00000536295 LIX1Q8N485 282 aa13.12□□□□□ -0.31
RTN3P1-201ENST00000536295 CCNYL1Q8N7R7 359 aa13.12□□□□□ -0.31
RTN3P1-201ENST00000536295 SIMC1Q8NDZ2 872 aa13.12□□□□□ -0.31
RTN3P1-201ENST00000536295 ACMSDQ8TDX5 336 aa13.12□□□□□ -0.31
RTN3P1-201ENST00000536295 CHTF18Q8WVB6 975 aa13.12□□□□□ -0.31
RTN3P1-201ENST00000536295 ZNF597Q96LX8 424 aa13.12□□□□□ -0.31
RTN3P1-201ENST00000536295 RILPQ96NA2 401 aa13.12□□□□□ -0.31
RTN3P1-201ENST00000536295 KCNA7Q96RP8 456 aa13.12□□□□□ -0.31
RTN3P1-201ENST00000536295 ITPAQ9BY32 194 aa13.12□□□□□ -0.31
RTN3P1-201ENST00000536295 ACPTQ9BZG2 426 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms