RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 PYCARDQ9ULZ3 195 aa12.17□□□□□ -0.46
CLSTN3-205ENST00000535452 STK38LQ9Y2H1 464 aa12.17□□□□□ -0.46
CLSTN3-205ENST00000535452 ASB4Q9Y574 426 aa12.17□□□□□ -0.46
CLSTN3-205ENST00000535452 LRBAP50851 2863 aa12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 UQCRHLA0A096LP55 91 aa12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 TMPRSS11DO60235 418 aa12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 ERN1O75460 977 aaKnown RBP12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 EEDO75530 441 aaKnown RBP12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 BCAS2O75934 225 aaPredicted RBP12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 KRT6AP02538 564 aa12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 GBAP04062 536 aa12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 KRT6BP04259 564 aa12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 CYP4B1P13584 511 aa12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 MTHFD2P13995 350 aa12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 CPMP14384 443 aa12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 NAGAP17050 411 aa12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 SSTR4P31391 388 aa12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 OPRM1P35372 400 aa12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 BSGP35613 385 aa12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 CPA2P48052 419 aa12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 KRT6CP48668 564 aa12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 FBXW4P57775 412 aa12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 EEF1A1P68104 462 aaKnown RBP12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 PSPHP78330 225 aa12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 MRPS22P82650 360 aaKnown RBP12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 TFF3Q07654 80 aa12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 PLCXD2Q0VAA5 305 aa12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 ERCC6LQ2NKX8 1250 aa12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 EEF1A1P5Q5VTE0 462 aa12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 SLC30A6Q6NXT4 461 aa12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 RNF175Q8N4F7 328 aa12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 ACBD4Q8NC06 268 aa12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 ADCY4Q8NFM4 1077 aa12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 SPPL2AQ8TCT8 520 aa12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 TRPC4APQ8TEL6 797 aa12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 DOK4Q8TEW6 326 aa12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 FAM222BQ8WU58 562 aa12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 RNASE6Q93091 150 aaKnown RBP12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 KLHL29Q96CT2 875 aa12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 CDK15Q96Q40 435 aa12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 TRIB1Q96RU8 372 aa12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 MRPL57Q9BQC6 102 aaKnown RBP12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 NTMT1Q9BV86 223 aa12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 MRPL46Q9H2W6 279 aaKnown RBP12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 ACSS3Q9H6R3 686 aa12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 CXorf21Q9HAI6 301 aa12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 SEMA4BQ9NPR2 832 aaPredicted RBP12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 XPR1Q9UBH6 696 aa12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 FAM215AQ9Y5M1 114 aa12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 HRH3Q9Y5N1 445 aa12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 CHCHD2Q9Y6H1 151 aaPredicted RBP12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 CACNA1CQ13936 2221 aa12.16□□□□□ -0.46
CLSTN3-205ENST00000535452 TUBAL3A6NHL2 446 aa12.15□□□□□ -0.46
CLSTN3-205ENST00000535452 EEF1E1-BLOC1S5C9J1V9 151 aa12.15□□□□□ -0.46
CLSTN3-205ENST00000535452 POC1B-GALNT4F8VUJ3 575 aa12.15□□□□□ -0.46
CLSTN3-205ENST00000535452 H0Y3Z8 333 aa12.15□□□□□ -0.46
CLSTN3-205ENST00000535452 HRKO00198 91 aa12.15□□□□□ -0.46
CLSTN3-205ENST00000535452 CASKO14936 926 aa12.15□□□□□ -0.46
CLSTN3-205ENST00000535452 ACOX3O15254 700 aa12.15□□□□□ -0.46
CLSTN3-205ENST00000535452 EEF1E1O43324 174 aaKnown RBP12.15□□□□□ -0.46
CLSTN3-205ENST00000535452 URI1O94763 535 aaPredicted RBP12.15□□□□□ -0.46
CLSTN3-205ENST00000535452 LRATO95237 230 aa12.15□□□□□ -0.46
CLSTN3-205ENST00000535452 SIX3O95343 332 aaPredicted RBP12.15□□□□□ -0.46
CLSTN3-205ENST00000535452 ACSL3O95573 720 aa12.15□□□□□ -0.46
CLSTN3-205ENST00000535452 EPPINO95925 133 aa12.15□□□□□ -0.46
CLSTN3-205ENST00000535452 ACTL6AO96019 429 aa12.15□□□□□ -0.46
CLSTN3-205ENST00000535452 TIMP3P35625 211 aa12.15□□□□□ -0.46
CLSTN3-205ENST00000535452 SLC7A5Q01650 507 aa12.15□□□□□ -0.46
CLSTN3-205ENST00000535452 FLYWCH1Q4VC44 716 aa12.15□□□□□ -0.46
CLSTN3-205ENST00000535452 TECRLQ5HYJ1 363 aa12.15□□□□□ -0.46
CLSTN3-205ENST00000535452 MRM1Q6IN84 353 aaKnown RBP12.15□□□□□ -0.46
CLSTN3-205ENST00000535452 AAGABQ6PD74 315 aa12.15□□□□□ -0.46
CLSTN3-205ENST00000535452 NUP54Q7Z3B4 507 aa12.15□□□□□ -0.46
CLSTN3-205ENST00000535452 OR14L1PQ8NHC6 308 aa12.15□□□□□ -0.46
CLSTN3-205ENST00000535452 WDR20Q8TBZ3 569 aa12.15□□□□□ -0.46
CLSTN3-205ENST00000535452 IFT81Q8WYA0 676 aa12.15□□□□□ -0.46
CLSTN3-205ENST00000535452 UCN3Q969E3 161 aa12.15□□□□□ -0.46
CLSTN3-205ENST00000535452 ABTB1Q969K4 478 aaPredicted RBP12.15□□□□□ -0.46
CLSTN3-205ENST00000535452 TMEM41AQ96HV5 264 aa12.15□□□□□ -0.46
CLSTN3-205ENST00000535452 FMO2Q99518 471 aa12.15□□□□□ -0.46
CLSTN3-205ENST00000535452 YIPF4Q9BSR8 244 aa12.15□□□□□ -0.46
CLSTN3-205ENST00000535452 ANGPTL4Q9BY76 406 aa12.15□□□□□ -0.46
CLSTN3-205ENST00000535452 BRF2Q9HAW0 419 aa12.15□□□□□ -0.46
CLSTN3-205ENST00000535452 SH2D2AQ9NP31 389 aa12.15□□□□□ -0.46
CLSTN3-205ENST00000535452 SPRR3Q9UBC9 169 aa12.15□□□□□ -0.46
CLSTN3-205ENST00000535452 CNOT11Q9UKZ1 510 aaKnown RBP12.15□□□□□ -0.46
CLSTN3-205ENST00000535452 C15orf41Q9Y2V0 281 aa12.15□□□□□ -0.46
CLSTN3-205ENST00000535452 A0A087WUV0 522 aaPredicted RBP12.14□□□□□ -0.47
CLSTN3-205ENST00000535452 GNG14A0A1W2PPG7 69 aa12.14□□□□□ -0.47
CLSTN3-205ENST00000535452 ESYT3A0FGR9 886 aa12.14□□□□□ -0.47
CLSTN3-205ENST00000535452 SYT5O00445 386 aa12.14□□□□□ -0.47
CLSTN3-205ENST00000535452 GNB5O14775 395 aa12.14□□□□□ -0.47
CLSTN3-205ENST00000535452 ZNF354AO60765 605 aaPredicted RBP12.14□□□□□ -0.47
CLSTN3-205ENST00000535452 ABCB7O75027 752 aa12.14□□□□□ -0.47
CLSTN3-205ENST00000535452 PPM1BO75688 479 aa12.14□□□□□ -0.47
CLSTN3-205ENST00000535452 HPNP05981 417 aa12.14□□□□□ -0.47
CLSTN3-205ENST00000535452 RHOXF2BP0C7M4 288 aa12.14□□□□□ -0.47
CLSTN3-205ENST00000535452 RFPL3SP0C7P2 107 aa12.14□□□□□ -0.47
CLSTN3-205ENST00000535452 CD99P14209 185 aa12.14□□□□□ -0.47
CLSTN3-205ENST00000535452 IL12BP29460 328 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms