RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 GABRA1P14867 456 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 IGFBP2P18065 325 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 S1PR1P21453 382 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 NT5EP21589 574 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 DEKP35659 375 aaKnown RBP8.18□□□□□ -1.1
COPB1-211ENST00000534234 HSD17B3P37058 310 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 NRG3P56975 720 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 FBXW4P57775 412 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 CLCQ05315 142 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 TFF3Q07654 80 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 RPS6KA2Q15349 733 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 TBCELQ5QJ74 424 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 C6orf163Q5TEZ5 329 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 LETMD1Q6P1Q0 360 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 COMMD6Q7Z4G1 85 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 OR7G1Q8NGA0 311 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 NEIL3Q8TAT5 605 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 ZNF483Q8TF39 744 aaPredicted RBP8.18□□□□□ -1.1
COPB1-211ENST00000534234 ADIPOR1Q96A54 375 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 TM4SF18Q96CE8 201 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 C1QTNF3Q9BXJ4 246 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 ZNF703Q9H7S9 590 aaPredicted RBP8.18□□□□□ -1.1
COPB1-211ENST00000534234 NMRK1Q9NWW6 199 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 QPCTLQ9NXS2 382 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 SPRR3Q9UBC9 169 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 B4GALT7Q9UBV7 327 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 ZNF225Q9UK10 706 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 CES1P1Q9UKY3 287 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 PSME2Q9UL46 239 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 SNX6Q9UNH7 406 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 PCDHA9Q9Y5H5 950 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 FBN2P35556 2912 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 A0A0G2JNJ9 132 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 GOLGA6L10A6NI86 522 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 TRIM3O75382 744 aaPredicted RBP8.18□□□□□ -1.1
COPB1-211ENST00000534234 ERAL1O75616 437 aaKnown RBP8.18□□□□□ -1.1
COPB1-211ENST00000534234 TRAPPC6AO75865 159 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 SUPT7LO94864 414 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 OR4F21O95013 312 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 CSNK2A2P19784 350 aaPredicted RBP8.18□□□□□ -1.1
COPB1-211ENST00000534234 POU3F2P20265 443 aaPredicted RBP8.18□□□□□ -1.1
COPB1-211ENST00000534234 TAC1P20366 129 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 ENDOUP21128 410 aaKnown RBP8.18□□□□□ -1.1
COPB1-211ENST00000534234 GDF1P27539 372 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 MSX1P28360 303 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 FEN1P39748 380 aaKnown RBP8.18□□□□□ -1.1
COPB1-211ENST00000534234 TRPC1P48995 793 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 TMED10P49755 219 aaKnown RBP8.18□□□□□ -1.1
COPB1-211ENST00000534234 GALNT1Q10472 559 aaPredicted RBP8.18□□□□□ -1.1
COPB1-211ENST00000534234 MAP4K2Q12851 820 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 C1orf185Q5T7R7 199 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 BICRALQ6AI39 1079 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 SLC48A1Q6P1K1 146 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 FAM111BQ6SJ93 734 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 TIFABQ6ZNK6 161 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 PACS2Q86VP3 889 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 DMRTC2Q8IXT2 367 aaPredicted RBP8.18□□□□□ -1.1
COPB1-211ENST00000534234 CLYBLQ8N0X4 340 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 LIX1Q8N485 282 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 SPPL2AQ8TCT8 520 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 SECISBP2Q96T21 854 aaKnown RBP8.18□□□□□ -1.1
COPB1-211ENST00000534234 HBEGFQ99075 208 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 ANGPTL4Q9BY76 406 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 BRINP2Q9C0B6 783 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 SLC6A15Q9H2J7 730 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 BRF2Q9HAW0 419 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 TMEM216Q9P0N5 145 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 VPS29Q9UBQ0 182 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 Q9UFV3 132 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 BCAP29Q9UHQ4 241 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 NFU1Q9UMS0 254 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 PCDHGB3Q9Y5G1 929 aa8.18□□□□□ -1.1
COPB1-211ENST00000534234 FAM47E-STBD1D6RA91 191 aa8.17□□□□□ -1.1
COPB1-211ENST00000534234 MANBAO00462 879 aa8.17□□□□□ -1.1
COPB1-211ENST00000534234 DLX3O60479 287 aa8.17□□□□□ -1.1
COPB1-211ENST00000534234 ULK1O75385 1050 aa8.17□□□□□ -1.1
COPB1-211ENST00000534234 SNX4O95219 450 aa8.17□□□□□ -1.1
COPB1-211ENST00000534234 KRT6AP02538 564 aa8.17□□□□□ -1.1
COPB1-211ENST00000534234 KRT6BP04259 564 aa8.17□□□□□ -1.1
COPB1-211ENST00000534234 ATP1B1P05026 303 aa8.17□□□□□ -1.1
COPB1-211ENST00000534234 ABHD2P08910 425 aa8.17□□□□□ -1.1
COPB1-211ENST00000534234 KRT15P19012 456 aa8.17□□□□□ -1.1
COPB1-211ENST00000534234 GCAP28676 217 aa8.17□□□□□ -1.1
COPB1-211ENST00000534234 ADH7P40394 386 aa8.17□□□□□ -1.1
COPB1-211ENST00000534234 CASP3P42574 277 aa8.17□□□□□ -1.1
COPB1-211ENST00000534234 KRT6CP48668 564 aa8.17□□□□□ -1.1
COPB1-211ENST00000534234 MASP1P48740 699 aa8.17□□□□□ -1.1
COPB1-211ENST00000534234 RPP38P78345 283 aaKnown RBP8.17□□□□□ -1.1
COPB1-211ENST00000534234 MGAT2Q10469 447 aa8.17□□□□□ -1.1
COPB1-211ENST00000534234 DUSP8Q13202 625 aa8.17□□□□□ -1.1
COPB1-211ENST00000534234 PRICKLE4Q2TBC4 344 aa8.17□□□□□ -1.1
COPB1-211ENST00000534234 UNC50Q53HI1 259 aa8.17□□□□□ -1.1
COPB1-211ENST00000534234 ZNF678Q5SXM1 525 aa8.17□□□□□ -1.1
COPB1-211ENST00000534234 FAM219BQ5XKK7 198 aa8.17□□□□□ -1.1
COPB1-211ENST00000534234 LIX1LQ8IVB5 337 aa8.17□□□□□ -1.1
COPB1-211ENST00000534234 IFT20Q8IY31 132 aa8.17□□□□□ -1.1
COPB1-211ENST00000534234 ULK2Q8IYT8 1036 aa8.17□□□□□ -1.1
COPB1-211ENST00000534234 PRR22Q8IZ63 422 aa8.17□□□□□ -1.1
COPB1-211ENST00000534234 MMP21Q8N119 569 aa8.17□□□□□ -1.1
COPB1-211ENST00000534234 VWA5B2Q8N398 1253 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms