RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, human

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSC-208	ENST00000533897	ATG13	O75143	517 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	CCNK	O75909	580 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	DLGAP3	O95886	979 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	IFNW1	P05000	195 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	ALOX12	P18054	663 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	DGKG	P49619	791 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	SNRPN	P63162	240 aa	Known RBP	4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	IL1RL1	Q01638	556 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	RAB40B	Q12829	278 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	COX10	Q12887	443 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	GRIN2C	Q14957	1233 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	MINDY4	Q4G0A6	757 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	ZNF805	Q5CZA5	627 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	C1orf53	Q5VUE5	145 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	TMEM107	Q6UX40	140 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	TMEM64	Q6YI46	380 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	ZNF793	Q6ZN11	406 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	PTCHD4	Q6ZW05	846 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	PXK	Q7Z7A4	578 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	NOXA1	Q86UR1	476 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	CELF5	Q8N6W0	485 aa	Known RBP	4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	ASCC1	Q8N9N2	400 aa	Known RBP	4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	LINC01555	Q8NAE3	123 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	OR4Q3	Q8NH05	313 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	SPPL2A	Q8TCT8	520 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	LRIG1	Q96JA1	1093 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	TEFM	Q96QE5	360 aa	Known RBP	4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	TMEM43	Q9BTV4	400 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	CNPPD1	Q9BV87	410 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	PRR14	Q9BWN1	585 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	TSSK6	Q9BXA6	273 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	SMG9	Q9H0W8	520 aa	Known RBP	4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	MMP28	Q9H239	520 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	PPIL3	Q9H2H8	161 aa	Known RBP	4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	ZDHHC6	Q9H6R6	413 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	RANGRF	Q9HD47	186 aa	Predicted RBP	4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	PAK6	Q9NQU5	681 aa	Predicted RBP	4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	CLN6	Q9NWW5	311 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	DNAJC27	Q9NZQ0	273 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	ZNF229	Q9UJW7	825 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	GPR34	Q9UPC5	381 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	MAP4K5	Q9Y4K4	846 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	SZT2	Q5T011	3432 aa		4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	KIAA0355	O15063	1070 aa		4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	SURF4	O15260	269 aa		4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	PROM1	O43490	865 aa		4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	MMP20	O60882	483 aa		4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	ZNF780A	O75290	641 aa	Predicted RBP	4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	NTN1	O95631	604 aa		4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	RAB36	O95755	333 aa		4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	KLK1	P06870	262 aa		4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	ZGLP1	P0C6A0	271 aa		4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	RPS4Y1	P22090	263 aa	Known RBP	4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	SLC2A5	P22732	501 aa		4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	ARL1	P40616	181 aa	Predicted RBP	4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	CYP4F2	P78329	520 aa		4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	GPLD1	P80108	840 aa		4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	AGER	Q15109	404 aa		4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	P2RY14	Q15391	338 aa		4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	MED22	Q15528	200 aa		4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	KHDRBS2	Q5VWX1	349 aa	Known RBP	4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	ETFBKMT	Q8IXQ9	262 aa		4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	SYT14	Q8NB59	555 aa		4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	ST13P5	Q8NFI4	369 aa	Predicted RBP	4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	GPR156	Q8NFN8	814 aa		4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	OR7G1	Q8NGA0	311 aa		4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	SP7	Q8TDD2	431 aa	Predicted RBP	4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	HOXB13	Q92826	284 aa	Predicted RBP	4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	PPCDC	Q96CD2	204 aa		4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	GPR137	Q96N19	417 aa		4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	ZNF681	Q96N22	645 aa		4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	PITHD1	Q9GZP4	211 aa	Predicted RBP	4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	MRPL17	Q9NRX2	175 aa	Known RBP	4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	ANKRD10	Q9NXR5	420 aa		4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	ZNF223	Q9UK11	482 aa	Predicted RBP	4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	CBLC	Q9ULV8	474 aa		4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	DUSP12	Q9UNI6	340 aa		4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	ANGPT4	Q9Y264	503 aa		4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	ATP11B	Q9Y2G3	1177 aa		4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	GPR55	Q9Y2T6	319 aa	Predicted RBP	4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	RPL36	Q9Y3U8	105 aa	Known RBP	4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	PCDHGB7	Q9Y5F8	929 aa		4.16	□□□□□ -1.74
CTSC-208	ENST00000533897		A0A1W2PQL4	384 aa	Predicted RBP	4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	C7orf66	A4D0T2	115 aa		4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	MAN2B1	O00754	1011 aa		4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	MAG	P20916	626 aa		4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	TBXA2R	P21731	343 aa		4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	SLC6A1	P30531	599 aa		4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	SOX6	P35712	828 aa		4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	GIPR	P48546	466 aa		4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	GZMK	P49863	264 aa		4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	WNT4	P56705	351 aa		4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	RPS26	P62854	115 aa	Known RBP	4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	TRA2B	P62995	288 aa	Known RBP	4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	TMEM52B	Q4KMG9	183 aa		4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	C6orf183	Q5T699	404 aa		4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	ERN2	Q76MJ5	926 aa	Known RBP	4.16	□□□□□ -1.74
CTSC-208	ENST00000533897	TMPRSS11B	Q86T26	416 aa		4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms