RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 RHAGQ02094 409 aa18.31■□□□□ 0.52
CAPN1-226ENST00000533820 CLVS2Q5SYC1 327 aa18.31■□□□□ 0.52
CAPN1-226ENST00000533820 PARS2Q7L3T8 475 aaKnown RBP18.31■□□□□ 0.52
CAPN1-226ENST00000533820 C6orf120Q7Z4R8 191 aa18.31■□□□□ 0.52
CAPN1-226ENST00000533820 RAB43Q86YS6 212 aa18.31■□□□□ 0.52
CAPN1-226ENST00000533820 DIRAS2Q96HU8 199 aa18.31■□□□□ 0.52
CAPN1-226ENST00000533820 CUEDC1Q9NWM3 386 aaPredicted RBP18.31■□□□□ 0.52
CAPN1-226ENST00000533820 TAC3Q9UHF0 121 aa18.31■□□□□ 0.52
CAPN1-226ENST00000533820 PLPP1O14494 284 aa18.31■□□□□ 0.52
CAPN1-226ENST00000533820 PRKRAO75569 313 aaKnown RBP18.31■□□□□ 0.52
CAPN1-226ENST00000533820 FOSL1P15407 271 aa18.31■□□□□ 0.52
CAPN1-226ENST00000533820 UQCRC2P22695 453 aa18.31■□□□□ 0.52
CAPN1-226ENST00000533820 GSTM5P46439 218 aa18.31■□□□□ 0.52
CAPN1-226ENST00000533820 HEPACAMQ14CZ8 416 aa18.31■□□□□ 0.52
CAPN1-226ENST00000533820 C1GALT1C1Q96EU7 318 aa18.31■□□□□ 0.52
CAPN1-226ENST00000533820 SLC25A19Q9HC21 320 aa18.31■□□□□ 0.52
CAPN1-226ENST00000533820 SSR3Q9UNL2 185 aa18.31■□□□□ 0.52
CAPN1-226ENST00000533820 MPZL2O60487 215 aa18.31■□□□□ 0.52
CAPN1-226ENST00000533820 POP7O75817 140 aaKnown RBP18.31■□□□□ 0.52
CAPN1-226ENST00000533820 OR12D1P0DN82 309 aa18.31■□□□□ 0.52
CAPN1-226ENST00000533820 DBPQ10586 325 aaPredicted RBP18.31■□□□□ 0.52
CAPN1-226ENST00000533820 C19orf48Q6RUI8 117 aa18.31■□□□□ 0.52
CAPN1-226ENST00000533820 ABI3BPQ7Z7G0 1075 aa18.31■□□□□ 0.52
CAPN1-226ENST00000533820 KRT73Q86Y46 540 aa18.31■□□□□ 0.52
CAPN1-226ENST00000533820 FYTTD1Q96QD9 318 aaKnown RBP18.31■□□□□ 0.52
CAPN1-226ENST00000533820 MACROD1Q9BQ69 325 aa18.31■□□□□ 0.52
CAPN1-226ENST00000533820 NUFIP1Q9UHK0 495 aaKnown RBP18.31■□□□□ 0.52
CAPN1-226ENST00000533820 LSM2Q9Y333 95 aaKnown RBP18.31■□□□□ 0.52
CAPN1-226ENST00000533820 FAM25AB3EWG3 89 aa18.3■□□□□ 0.52
CAPN1-226ENST00000533820 FAM25CB3EWG5 89 aa18.3■□□□□ 0.52
CAPN1-226ENST00000533820 FAM25GB3EWG6 89 aa18.3■□□□□ 0.52
CAPN1-226ENST00000533820 ETV5P41161 510 aa18.3■□□□□ 0.52
CAPN1-226ENST00000533820 GPR1P46091 355 aa18.3■□□□□ 0.52
CAPN1-226ENST00000533820 ETV1P50549 477 aa18.3■□□□□ 0.52
CAPN1-226ENST00000533820 PNLIPRP1P54315 467 aa18.3■□□□□ 0.52
CAPN1-226ENST00000533820 NTHL1P78549 312 aa18.3■□□□□ 0.52
CAPN1-226ENST00000533820 MESP2Q0VG99 397 aa18.3■□□□□ 0.52
CAPN1-226ENST00000533820 ZNF805Q5CZA5 627 aa18.3■□□□□ 0.52
CAPN1-226ENST00000533820 TOR2AQ5JU69 321 aa18.3■□□□□ 0.52
CAPN1-226ENST00000533820 PHC2Q8IXK0 858 aa18.3■□□□□ 0.52
CAPN1-226ENST00000533820 TMCO6Q96DC7 493 aa18.3■□□□□ 0.52
CAPN1-226ENST00000533820 LRR1Q96L50 414 aa18.3■□□□□ 0.52
CAPN1-226ENST00000533820 SLA2Q9H6Q3 261 aa18.3■□□□□ 0.52
CAPN1-226ENST00000533820 A0A1W2PQL4 384 aaPredicted RBP18.3■□□□□ 0.52
CAPN1-226ENST00000533820 FOXE1O00358 373 aaPredicted RBP18.3■□□□□ 0.52
CAPN1-226ENST00000533820 NOS1APO75052 506 aaPredicted RBP18.3■□□□□ 0.52
CAPN1-226ENST00000533820 PRAMEF14Q5SWL7 426 aa18.3■□□□□ 0.52
CAPN1-226ENST00000533820 PRAMEF13Q5VWM6 474 aa18.3■□□□□ 0.52
CAPN1-226ENST00000533820 PGBD2Q6P3X8 592 aa18.3■□□□□ 0.52
CAPN1-226ENST00000533820 FAM83HQ6ZRV2 1179 aaPredicted RBP18.3■□□□□ 0.52
CAPN1-226ENST00000533820 GLCCI1Q86VQ1 547 aa18.3■□□□□ 0.52
CAPN1-226ENST00000533820 AMER3Q8N944 861 aa18.3■□□□□ 0.52
CAPN1-226ENST00000533820 GATAD2BQ8WXI9 593 aa18.3■□□□□ 0.52
CAPN1-226ENST00000533820 PDXPQ96GD0 296 aa18.3■□□□□ 0.52
CAPN1-226ENST00000533820 CCDC32Q9BV29 185 aa18.3■□□□□ 0.52
CAPN1-226ENST00000533820 RACGAP1Q9H0H5 632 aa18.3■□□□□ 0.52
CAPN1-226ENST00000533820 QRSL1Q9H0R6 528 aaKnown RBP18.3■□□□□ 0.52
CAPN1-226ENST00000533820 SPHK2Q9NRA0 654 aa18.3■□□□□ 0.52
CAPN1-226ENST00000533820 MEIOCA2RUB1 952 aa18.29■□□□□ 0.52
CAPN1-226ENST00000533820 MMP20O60882 483 aa18.29■□□□□ 0.52
CAPN1-226ENST00000533820 ADAP00813 363 aa18.29■□□□□ 0.52
CAPN1-226ENST00000533820 SDC2P34741 201 aa18.29■□□□□ 0.52
CAPN1-226ENST00000533820 DCDC1P59894 354 aa18.29■□□□□ 0.52
CAPN1-226ENST00000533820 HOXC5Q00444 222 aa18.29■□□□□ 0.52
CAPN1-226ENST00000533820 CD83Q01151 205 aa18.29■□□□□ 0.52
CAPN1-226ENST00000533820 MAP4K2Q12851 820 aa18.29■□□□□ 0.52
CAPN1-226ENST00000533820 GPR50Q13585 617 aa18.29■□□□□ 0.52
CAPN1-226ENST00000533820 GINS1Q14691 196 aa18.29■□□□□ 0.52
CAPN1-226ENST00000533820 ZMYND11Q15326 602 aa18.29■□□□□ 0.52
CAPN1-226ENST00000533820 ACSM5Q6NUN0 579 aa18.29■□□□□ 0.52
CAPN1-226ENST00000533820 ADCK2Q7Z695 626 aa18.29■□□□□ 0.52
CAPN1-226ENST00000533820 SLC9B2Q86UD5 537 aa18.29■□□□□ 0.52
CAPN1-226ENST00000533820 ING5Q8WYH8 240 aa18.29■□□□□ 0.52
CAPN1-226ENST00000533820 TEX10Q9NXF1 929 aaPredicted RBP18.29■□□□□ 0.52
CAPN1-226ENST00000533820 ENOPH1Q9UHY7 261 aa18.29■□□□□ 0.52
CAPN1-226ENST00000533820 STUB1Q9UNE7 303 aa18.29■□□□□ 0.52
CAPN1-226ENST00000533820 OBSL1O75147 1896 aa18.29■□□□□ 0.52
CAPN1-226ENST00000533820 H7BY64 318 aa18.29■□□□□ 0.52
CAPN1-226ENST00000533820 QSOX1O00391 747 aa18.29■□□□□ 0.52
CAPN1-226ENST00000533820 IRS1P35568 1242 aa18.29■□□□□ 0.52
CAPN1-226ENST00000533820 MMP12P39900 470 aa18.29■□□□□ 0.52
CAPN1-226ENST00000533820 MLLT1Q03111 559 aaPredicted RBP18.29■□□□□ 0.52
CAPN1-226ENST00000533820 LARS2Q15031 903 aaKnown RBP18.29■□□□□ 0.52
CAPN1-226ENST00000533820 TYW3Q6IPR3 259 aaKnown RBP18.29■□□□□ 0.52
CAPN1-226ENST00000533820 PODNL1Q6PEZ8 512 aa18.29■□□□□ 0.52
CAPN1-226ENST00000533820 IQCHQ86VS3 1027 aa18.29■□□□□ 0.52
CAPN1-226ENST00000533820 KREMEN2Q8NCW0 462 aa18.29■□□□□ 0.52
CAPN1-226ENST00000533820 PRAP1Q96NZ9 151 aa18.29■□□□□ 0.52
CAPN1-226ENST00000533820 DEFB118Q96PH6 123 aa18.29■□□□□ 0.52
CAPN1-226ENST00000533820 MND1Q9BWT6 205 aa18.29■□□□□ 0.52
CAPN1-226ENST00000533820 RANGRFQ9HD47 186 aaPredicted RBP18.29■□□□□ 0.52
CAPN1-226ENST00000533820 FABP12A6NFH5 140 aa18.29■□□□□ 0.52
CAPN1-226ENST00000533820 FRS3O43559 492 aa18.29■□□□□ 0.52
CAPN1-226ENST00000533820 PSKH1P11801 424 aa18.29■□□□□ 0.52
CAPN1-226ENST00000533820 PSPHP78330 225 aa18.29■□□□□ 0.52
CAPN1-226ENST00000533820 C1DQ13901 141 aaKnown RBP18.29■□□□□ 0.52
CAPN1-226ENST00000533820 PYDC2Q56P42 97 aa18.29■□□□□ 0.52
CAPN1-226ENST00000533820 CLEC12AQ5QGZ9 265 aa18.29■□□□□ 0.52
CAPN1-226ENST00000533820 ZNF697Q5TEC3 545 aa18.29■□□□□ 0.52
CAPN1-226ENST00000533820 ZNF547Q8IVP9 402 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms