RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 KRTCAP2Q8N6L1 136 aa11.12□□□□□ -0.63
SSBP3-214ENST00000533209 ZNF615Q8N8J6 731 aa11.12□□□□□ -0.63
SSBP3-214ENST00000533209 Q8NA96 180 aa11.12□□□□□ -0.63
SSBP3-214ENST00000533209 SIMC1Q8NDZ2 872 aa11.12□□□□□ -0.63
SSBP3-214ENST00000533209 OR7G1Q8NGA0 311 aa11.12□□□□□ -0.63
SSBP3-214ENST00000533209 OR7A2PQ8NGA2 310 aa11.12□□□□□ -0.63
SSBP3-214ENST00000533209 OR9A2Q8NGT5 310 aa11.12□□□□□ -0.63
SSBP3-214ENST00000533209 PPCDCQ96CD2 204 aa11.12□□□□□ -0.63
SSBP3-214ENST00000533209 MTERF3Q96E29 417 aa11.12□□□□□ -0.63
SSBP3-214ENST00000533209 MAELQ96JY0 434 aaKnown RBP11.12□□□□□ -0.63
SSBP3-214ENST00000533209 MAGEB18Q96M61 343 aa11.12□□□□□ -0.63
SSBP3-214ENST00000533209 AMDHD1Q96NU7 426 aa11.12□□□□□ -0.63
SSBP3-214ENST00000533209 BRINP2Q9C0B6 783 aa11.12□□□□□ -0.63
SSBP3-214ENST00000533209 GLIPR2Q9H4G4 154 aa11.12□□□□□ -0.63
SSBP3-214ENST00000533209 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.12□□□□□ -0.63
SSBP3-214ENST00000533209 LUZP4Q9P127 313 aa11.12□□□□□ -0.63
SSBP3-214ENST00000533209 MYOTQ9UBF9 498 aa11.12□□□□□ -0.63
SSBP3-214ENST00000533209 USH1CQ9Y6N9 552 aa11.12□□□□□ -0.63
SSBP3-214ENST00000533209 WWP2O00308 870 aa11.11□□□□□ -0.63
SSBP3-214ENST00000533209 CDK2AP1O14519 115 aa11.11□□□□□ -0.63
SSBP3-214ENST00000533209 FCHO1O14526 889 aa11.11□□□□□ -0.63
SSBP3-214ENST00000533209 PDPK1O15530 556 aa11.11□□□□□ -0.63
SSBP3-214ENST00000533209 ITGA10O75578 1167 aa11.11□□□□□ -0.63
SSBP3-214ENST00000533209 OR2J2O76002 312 aa11.11□□□□□ -0.63
SSBP3-214ENST00000533209 ALDOCP09972 364 aaKnown RBP11.11□□□□□ -0.63
SSBP3-214ENST00000533209 PRPS1L1P21108 318 aa11.11□□□□□ -0.63
SSBP3-214ENST00000533209 NTSP30990 170 aa11.11□□□□□ -0.63
SSBP3-214ENST00000533209 HPCAL1P37235 193 aa11.11□□□□□ -0.63
SSBP3-214ENST00000533209 CASRP41180 1078 aa11.11□□□□□ -0.63
SSBP3-214ENST00000533209 FRKP42685 505 aaPredicted RBP11.11□□□□□ -0.63
SSBP3-214ENST00000533209 NCBP2P52298 156 aaKnown RBP eCLIP11.11□□□□□ -0.63
SSBP3-214ENST00000533209 C21orf58P58505 322 aa11.11□□□□□ -0.63
SSBP3-214ENST00000533209 MRPS35P82673 323 aaKnown RBP11.11□□□□□ -0.63
SSBP3-214ENST00000533209 C19orf57Q0VDD7 668 aa11.11□□□□□ -0.63
SSBP3-214ENST00000533209 EXOSC7Q15024 291 aaKnown RBP11.11□□□□□ -0.63
SSBP3-214ENST00000533209 EBPQ15125 230 aaKnown RBP11.11□□□□□ -0.63
SSBP3-214ENST00000533209 TLR1Q15399 786 aa11.11□□□□□ -0.63
SSBP3-214ENST00000533209 FHL5Q5TD97 284 aa11.11□□□□□ -0.63
SSBP3-214ENST00000533209 FAM47EQ6ZV65 393 aa11.11□□□□□ -0.63
SSBP3-214ENST00000533209 SLC29A4Q7RTT9 530 aa11.11□□□□□ -0.63
SSBP3-214ENST00000533209 R3HCC1LQ7Z5L2 792 aaKnown RBP11.11□□□□□ -0.63
SSBP3-214ENST00000533209 ZNF227Q86WZ6 799 aa11.11□□□□□ -0.63
SSBP3-214ENST00000533209 MDS2Q8NDY4 140 aa11.11□□□□□ -0.63
SSBP3-214ENST00000533209 OR5L2Q8NGL0 311 aa11.11□□□□□ -0.63
SSBP3-214ENST00000533209 NUBPLQ8TB37 319 aa11.11□□□□□ -0.63
SSBP3-214ENST00000533209 NUDT8Q8WV74 236 aa11.11□□□□□ -0.63
SSBP3-214ENST00000533209 KAT2AQ92830 837 aa11.11□□□□□ -0.63
SSBP3-214ENST00000533209 CIDECQ96AQ7 238 aaPredicted RBP11.11□□□□□ -0.63
SSBP3-214ENST00000533209 ERP27Q96DN0 273 aa11.11□□□□□ -0.63
SSBP3-214ENST00000533209 SIGLEC12Q96PQ1 595 aa11.11□□□□□ -0.63
SSBP3-214ENST00000533209 UTP23Q9BRU9 249 aaKnown RBP11.11□□□□□ -0.63
SSBP3-214ENST00000533209 OR10A5Q9H207 317 aa11.11□□□□□ -0.63
SSBP3-214ENST00000533209 TRIM45Q9H8W5 580 aaPredicted RBP11.11□□□□□ -0.63
SSBP3-214ENST00000533209 ANKRA2Q9H9E1 313 aa11.11□□□□□ -0.63
SSBP3-214ENST00000533209 ANKRD10Q9NXR5 420 aa11.11□□□□□ -0.63
SSBP3-214ENST00000533209 SH3BP4Q9P0V3 963 aa11.11□□□□□ -0.63
SSBP3-214ENST00000533209 ABI3Q9P2A4 366 aa11.11□□□□□ -0.63
SSBP3-214ENST00000533209 YARS2Q9Y2Z4 477 aaKnown RBP11.11□□□□□ -0.63
SSBP3-214ENST00000533209 HEMK1Q9Y5R4 338 aaPredicted RBP11.11□□□□□ -0.63
SSBP3-214ENST00000533209 PRRC2CQ9Y520 2896 aaKnown RBP11.1□□□□□ -0.63
SSBP3-214ENST00000533209 TRAV17A0A0B4J275 112 aa11.1□□□□□ -0.63
SSBP3-214ENST00000533209 ANKRD28O15084 1053 aa11.1□□□□□ -0.63
SSBP3-214ENST00000533209 PLOD3O60568 738 aa11.1□□□□□ -0.63
SSBP3-214ENST00000533209 ZNF354AO60765 605 aaPredicted RBP11.1□□□□□ -0.63
SSBP3-214ENST00000533209 NADKO95544 446 aaPredicted RBP11.1□□□□□ -0.63
SSBP3-214ENST00000533209 LAMP1P11279 417 aa11.1□□□□□ -0.63
SSBP3-214ENST00000533209 HLCSP50747 726 aa11.1□□□□□ -0.63
SSBP3-214ENST00000533209 SSR4P51571 173 aa11.1□□□□□ -0.63
SSBP3-214ENST00000533209 CLDN8P56748 225 aa11.1□□□□□ -0.63
SSBP3-214ENST00000533209 ZNF169Q14929 603 aaPredicted RBP11.1□□□□□ -0.63
SSBP3-214ENST00000533209 OR1C1Q15619 314 aa11.1□□□□□ -0.63
SSBP3-214ENST00000533209 PIGGQ5H8A4 983 aa11.1□□□□□ -0.63
SSBP3-214ENST00000533209 EPGNQ6UW88 154 aa11.1□□□□□ -0.63
SSBP3-214ENST00000533209 ZNF551Q7Z340 670 aaPredicted RBP11.1□□□□□ -0.63
SSBP3-214ENST00000533209 SPATA19Q7Z5L4 167 aa11.1□□□□□ -0.63
SSBP3-214ENST00000533209 ARFGAP2Q8N6H7 521 aa11.1□□□□□ -0.63
SSBP3-214ENST00000533209 ZNF441Q8N8Z8 693 aa11.1□□□□□ -0.63
SSBP3-214ENST00000533209 OR7G2Q8NG99 324 aa11.1□□□□□ -0.63
SSBP3-214ENST00000533209 OR52R1Q8NGF1 315 aa11.1□□□□□ -0.63
SSBP3-214ENST00000533209 C16orf52Q8NHV5 167 aa11.1□□□□□ -0.63
SSBP3-214ENST00000533209 ACTRT2Q8TDY3 377 aa11.1□□□□□ -0.63
SSBP3-214ENST00000533209 ADIPOR1Q96A54 375 aa11.1□□□□□ -0.63
SSBP3-214ENST00000533209 COQ8BQ96D53 544 aa11.1□□□□□ -0.63
SSBP3-214ENST00000533209 OR52B2Q96RD2 323 aa11.1□□□□□ -0.63
SSBP3-214ENST00000533209 GAL3ST4Q96RP7 486 aa11.1□□□□□ -0.63
SSBP3-214ENST00000533209 RASL10BQ96S79 203 aa11.1□□□□□ -0.63
SSBP3-214ENST00000533209 WWTR1Q9GZV5 400 aa11.1□□□□□ -0.63
SSBP3-214ENST00000533209 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.1□□□□□ -0.63
SSBP3-214ENST00000533209 EPN3Q9H201 632 aa11.1□□□□□ -0.63
SSBP3-214ENST00000533209 AIG1Q9NVV5 245 aa11.1□□□□□ -0.63
SSBP3-214ENST00000533209 BCAP29Q9UHQ4 241 aa11.1□□□□□ -0.63
SSBP3-214ENST00000533209 DTX4Q9Y2E6 619 aa11.1□□□□□ -0.63
SSBP3-214ENST00000533209 PCDHGA10Q9Y5H3 936 aa11.1□□□□□ -0.63
SSBP3-214ENST00000533209 CPAMD8Q8IZJ3 1885 aa11.1□□□□□ -0.63
SSBP3-214ENST00000533209 A0A087WV62 115 aa11.09□□□□□ -0.63
SSBP3-214ENST00000533209 C2orf92A0A1B0GVN3 265 aa11.09□□□□□ -0.63
SSBP3-214ENST00000533209 TCP11X1B4DZS4 312 aa11.09□□□□□ -0.63
SSBP3-214ENST00000533209 PLOD2O00469 737 aa11.09□□□□□ -0.63
SSBP3-214ENST00000533209 DYNC1I1O14576 645 aa11.09□□□□□ -0.63
SSBP3-214ENST00000533209 PRAMEF2O60811 474 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms