RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 GPR26Q8NDV2 337 aa14.08□□□□□ -0.15
PCDHA9-202ENST00000532602 OR5T2Q8NGG2 359 aa14.08□□□□□ -0.15
PCDHA9-202ENST00000532602 FAM129BQ96TA1 746 aa14.08□□□□□ -0.15
PCDHA9-202ENST00000532602 HPF1Q9NWY4 346 aa14.08□□□□□ -0.15
PCDHA9-202ENST00000532602 EURLQ9NYK6 297 aa14.08□□□□□ -0.15
PCDHA9-202ENST00000532602 PTBP2Q9UKA9 531 aaKnown RBP14.08□□□□□ -0.15
PCDHA9-202ENST00000532602 PRAMEF2O60811 474 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 ITGB7P26010 798 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 RAB15P59190 212 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 HNRNPA1L2Q32P51 320 aaKnown RBP14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 GALNT15Q8N3T1 639 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 OR51G2Q8NGK0 314 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 THAP6Q8TBB0 222 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 NANOS1Q8WY41 292 aaKnown RBP14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 HLA-CQ95604 372 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 SLC7A6OSQ96CW6 309 aaPredicted RBP14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 ZNF317Q96PQ6 595 aaPredicted RBP14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 DNAJC27Q9NZQ0 273 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 ATXN7L1Q9ULK2 861 aaPredicted RBP14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 PCDHGA10Q9Y5H3 936 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 NUMBLQ9Y6R0 609 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 A6NLC8 198 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 E7ESA3 106 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 SLC33A1O00400 549 aaPredicted RBP14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 PABPC4LP0CB38 370 aaKnown RBP14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 GAS6Q14393 721 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 IRF4Q15306 451 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 GTF2IRD2BQ6EKJ0 949 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 PARS2Q7L3T8 475 aaKnown RBP14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 GTF2IRD2Q86UP8 949 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 SLC6A15Q9H2J7 730 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 ANKMY1Q9P2S6 941 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 GXYLT2A0PJZ3 443 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 FAM189A1O60320 539 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 IRF2P14316 349 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 GSTM2P28161 218 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 TAS2R38P59533 333 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 TANGO2Q6ICL3 276 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 CPXM2Q8N436 756 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 ELP5Q8TE02 316 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 TM9SF4Q92544 642 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 CHIAQ9BZP6 476 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 OR10A4Q9H209 315 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 TAS2R10Q9NYW0 307 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 KIR2DS5A0A0G2JLQ3 304 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 A0A0G2JNG1 304 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 KIR2DS3K7RE56 304 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 CDH15P55291 814 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 GALK2Q01415 458 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 KIR2DS5Q14953 304 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 LRRC69Q6ZNQ3 347 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 HTR3DQ70Z44 454 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 OR6C4Q8NGE1 309 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 NAT6Q93015 286 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 PGAM5Q96HS1 289 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 URM1Q9BTM9 101 aaKnown RBP14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 DUSP23Q9BVJ7 150 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 MEAF6Q9HAF1 191 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 IL26Q9NPH9 171 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 NANSQ9NR45 359 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 AIG1Q9NVV5 245 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 STOX2Q9P2F5 926 aaPredicted RBP14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 TJP1Q07157 1748 aa14.08□□□□□ -0.16
PCDHA9-202ENST00000532602 GPR89AB7ZAQ6 455 aa14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 OR7A10O76100 309 aa14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 GPR89BP0CG08 455 aa14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 ALKAL1Q6UXT8 129 aa14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 ZNF611Q8N823 705 aa14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 KLHDC9Q8NEP7 349 aa14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 NLGN4YQ8NFZ3 816 aaPredicted RBP14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 ZNF559Q9BR84 538 aa14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 RPS3P23396 243 aaKnown RBP eCLIP14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 KDELR2P33947 212 aa14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 FOLR3P41439 243 aa14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 SRYQ05066 204 aa14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 ARHGAP11AQ6P4F7 1023 aa14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 OR51A7Q8NH64 312 aa14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 SLC5A7Q9GZV3 580 aa14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 KATNBL1Q9H079 304 aa14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 ZNF576Q9H609 170 aa14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 TBX10O75333 385 aa14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 ARHGEF15O94989 841 aa14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 CDRT1O95170 752 aa14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 SLC16A8O95907 504 aa14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 NR0B1P51843 470 aaKnown RBP14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 CLDN8P56748 225 aa14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 MAMDC2Q7Z304 686 aaPredicted RBP14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 UBE2Q1Q7Z7E8 422 aa14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 FBXL8Q96CD0 374 aa14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 NEDD4LQ96PU5 975 aa14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 SLC12A9Q9BXP2 914 aa14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 PRSS21Q9Y6M0 314 aa14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 A0A1B0GVC2 190 aa14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 DPPA5A6NC42 116 aa14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 A6NL46 340 aa14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 SDHDO14521 159 aa14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 MT-ND2P03891 347 aa14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 CDKL4Q5MAI5 379 aa14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 PMF1-BGLAPU3KQ54 211 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms