RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 KIAA1143Q96AT1 154 aaPredicted RBP6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 TSSK3Q96PN8 268 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 PKMYT1Q99640 499 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 MAPKAP1Q9BPZ7 522 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 WRAP53Q9BUR4 548 aaKnown RBP6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 TPSD1Q9BZJ3 242 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 SLC39A8Q9C0K1 460 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 NANSQ9NR45 359 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 SH3BP4Q9P0V3 963 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 KLHL42Q9P2K6 505 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 CD84Q9UIB8 345 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 FBXW11Q9UKB1 542 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 NUBP2Q9Y5Y2 271 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 LGALS8O00214 317 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 DCLK1O15075 740 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 SIGLEC6O43699 453 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 SNAPINO95295 136 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 GUCA1CO95843 209 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 SRPRAP08240 638 aaKnown RBP6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 HIST1H2AGP0C0S8 130 aaPredicted RBP6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 CD1EP15812 388 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 HIST1H2ADP20671 130 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 EFNA1P20827 205 aaPredicted RBP6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 PDHA2P29803 388 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 CHI3L1P36222 383 aaPredicted RBP6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 CRATP43155 626 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 VEGFCP49767 419 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 DSC2Q02487 901 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 CRYZQ08257 329 aaKnown RBP6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 SNTB2Q13425 540 aaKnown RBP6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 RCAN2Q14206 197 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 ZNF234Q14588 700 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 USP39Q53GS9 565 aaKnown RBP6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 MS4A13Q5J8X5 152 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 ARMC12Q5T9G4 340 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 GHDCQ8N2G8 530 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 HJURPQ8NCD3 748 aaPredicted RBP6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 OLIG1Q8TAK6 271 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 RLN3Q8WXF3 142 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 SMARCD2Q92925 531 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 RNF31Q96EP0 1072 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 ZNF419Q96HQ0 510 aaPredicted RBP6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 HIST1H2AHQ96KK5 128 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 MBOAT4Q96T53 435 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 HIST1H2AJQ99878 128 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 H2AFJQ9BTM1 129 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 ZNF471Q9BX82 626 aaPredicted RBP6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 GAREM1Q9H706 876 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 C8orf33Q9H7E9 229 aaPredicted RBP6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 IGSF5Q9NSI5 407 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 EYSQ5T1H1 3165 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 SCN10AQ9Y5Y9 1956 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 TRBV23OR9-2A0A075B6M9 112 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 TBC1D3DA0A087WVF3 549 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 TBC1D3IA0A087WXS9 549 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 TBC1D3EA0A087X179 549 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 TBC1D3KA0A087X1G2 549 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 TBC1D3FA6NER0 549 aaPredicted RBP6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 MGAT4DA6NG13 374 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 TBC1D3LB9A6J9 549 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 TLR4O00206 839 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 SLC28A2O43868 658 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 HPGDSO60760 199 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 PRAMEF2O60811 474 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 SPDEFO95238 335 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 IL1AP01583 271 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 KLKB1P03952 638 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 RETP07949 1114 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 ALDOCP09972 364 aaKnown RBP6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 TBC1D3HP0C7X1 549 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 G6PDP11413 515 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 RHCEP18577 417 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 PPIBP23284 216 aaKnown RBP6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 KIR3DL1P43629 444 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 AVPR1BP47901 424 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 SLC6A11P48066 632 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 PSPHP78330 225 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 POU4F2Q12837 409 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 C6orf136Q5SQH8 315 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 TBC1D3GQ6DHY5 549 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 KIAA0930Q6ICG6 404 aaPredicted RBP6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 TBC1D3CQ6IPX1 549 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 NLRC3Q7RTR2 1065 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 CLEC14AQ86T13 490 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 TMC8Q8IU68 726 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 PHACTR4Q8IZ21 702 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 TBC1D3Q8IZP1 549 aaPredicted RBP6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 SELENOMQ8WWX9 145 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 GGHQ92820 318 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 C3orf49Q96BT1 292 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 ZNF689Q96CS4 500 aaPredicted RBP6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 FCRL1Q96LA6 429 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 LINC00052Q96N35 136 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 SLC38A2Q96QD8 506 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 OR4K3Q96R72 315 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 BBS4Q96RK4 519 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 S100A13Q99584 98 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 SRRQ9GZT4 340 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 OSGEPL1Q9H4B0 414 aa6.47□□□□□ -1.37
TGFBR3-209ENST00000532540 METTL17Q9H7H0 456 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms