RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 WWTR1Q9GZV5 400 aa12.9□□□□□ -0.34
TSPAN4-220ENST00000532375 OR10A5Q9H207 317 aa12.9□□□□□ -0.34
TSPAN4-220ENST00000532375 ZNF446Q9NWS9 450 aa12.9□□□□□ -0.34
TSPAN4-220ENST00000532375 ABI3Q9P2A4 366 aa12.9□□□□□ -0.34
TSPAN4-220ENST00000532375 COPS7AQ9UBW8 275 aa12.9□□□□□ -0.34
TSPAN4-220ENST00000532375 DTX4Q9Y2E6 619 aa12.9□□□□□ -0.34
TSPAN4-220ENST00000532375 TMED5Q9Y3A6 229 aa12.9□□□□□ -0.34
TSPAN4-220ENST00000532375 UBR5O95071 2799 aaPredicted RBP12.9□□□□□ -0.34
TSPAN4-220ENST00000532375 EXPH5Q8NEV8 1989 aa12.89□□□□□ -0.35
TSPAN4-220ENST00000532375 NINQ8N4C6 2090 aa12.89□□□□□ -0.35
TSPAN4-220ENST00000532375 ASPDHA6ND91 283 aa12.89□□□□□ -0.35
TSPAN4-220ENST00000532375 OR6C76A6NM76 312 aa12.89□□□□□ -0.35
TSPAN4-220ENST00000532375 TCP11X1B4DZS4 312 aa12.89□□□□□ -0.35
TSPAN4-220ENST00000532375 DYRK3O43781 588 aa12.89□□□□□ -0.35
TSPAN4-220ENST00000532375 SKAP2O75563 359 aaPredicted RBP12.89□□□□□ -0.35
TSPAN4-220ENST00000532375 CBX6O95503 412 aa12.89□□□□□ -0.35
TSPAN4-220ENST00000532375 SSR4P51571 173 aa12.89□□□□□ -0.35
TSPAN4-220ENST00000532375 MRPS35P82673 323 aaKnown RBP12.89□□□□□ -0.35
TSPAN4-220ENST00000532375 OCRLQ01968 901 aa12.89□□□□□ -0.35
TSPAN4-220ENST00000532375 OC90Q02509 493 aaPredicted RBP12.89□□□□□ -0.35
TSPAN4-220ENST00000532375 SRSF11Q05519 484 aaKnown RBP12.89□□□□□ -0.35
TSPAN4-220ENST00000532375 ZNF791Q3KP31 576 aaPredicted RBP12.89□□□□□ -0.35
TSPAN4-220ENST00000532375 GALNTL6Q49A17 601 aa12.89□□□□□ -0.35
TSPAN4-220ENST00000532375 FHL5Q5TD97 284 aa12.89□□□□□ -0.35
TSPAN4-220ENST00000532375 VWA5B2Q8N398 1253 aa12.89□□□□□ -0.35
TSPAN4-220ENST00000532375 OR7G1Q8NGA0 311 aa12.89□□□□□ -0.35
TSPAN4-220ENST00000532375 C16orf52Q8NHV5 167 aa12.89□□□□□ -0.35
TSPAN4-220ENST00000532375 NUDT8Q8WV74 236 aa12.89□□□□□ -0.35
TSPAN4-220ENST00000532375 PPP3R2Q96LZ3 170 aa12.89□□□□□ -0.35
TSPAN4-220ENST00000532375 TSSK3Q96PN8 268 aa12.89□□□□□ -0.35
TSPAN4-220ENST00000532375 SLX1AQ9BQ83 275 aa12.89□□□□□ -0.35
TSPAN4-220ENST00000532375 ANKRA2Q9H9E1 313 aa12.89□□□□□ -0.35
TSPAN4-220ENST00000532375 SH2D2AQ9NP31 389 aa12.89□□□□□ -0.35
TSPAN4-220ENST00000532375 ARGLU1Q9NWB6 273 aaPredicted RBP12.89□□□□□ -0.35
TSPAN4-220ENST00000532375 ZNF780BQ9Y6R6 833 aa12.89□□□□□ -0.35
TSPAN4-220ENST00000532375 HIVEP3Q5T1R4 2406 aa12.89□□□□□ -0.35
TSPAN4-220ENST00000532375 NME2P1O60361 137 aa12.88□□□□□ -0.35
TSPAN4-220ENST00000532375 SLC25A12O75746 678 aa12.88□□□□□ -0.35
TSPAN4-220ENST00000532375 CD46P15529 392 aa12.88□□□□□ -0.35
TSPAN4-220ENST00000532375 PCSK2P16519 638 aa12.88□□□□□ -0.35
TSPAN4-220ENST00000532375 GPX3P22352 226 aa12.88□□□□□ -0.35
TSPAN4-220ENST00000532375 NME2P22392 152 aa12.88□□□□□ -0.35
TSPAN4-220ENST00000532375 FRKP42685 505 aaPredicted RBP12.88□□□□□ -0.35
TSPAN4-220ENST00000532375 EMDP50402 254 aa12.88□□□□□ -0.35
TSPAN4-220ENST00000532375 TDGF1P3P51864 188 aa12.88□□□□□ -0.35
TSPAN4-220ENST00000532375 PMP22Q01453 160 aa12.88□□□□□ -0.35
TSPAN4-220ENST00000532375 SRSF1Q07955 248 aaKnown RBP eCLIP12.88□□□□□ -0.35
TSPAN4-220ENST00000532375 EXOSC7Q15024 291 aaKnown RBP12.88□□□□□ -0.35
TSPAN4-220ENST00000532375 INAQ16352 499 aa12.88□□□□□ -0.35
TSPAN4-220ENST00000532375 RNFT1Q5M7Z0 435 aa12.88□□□□□ -0.35
TSPAN4-220ENST00000532375 IL20RBQ6UXL0 311 aa12.88□□□□□ -0.35
TSPAN4-220ENST00000532375 GALNTL5Q7Z4T8 443 aa12.88□□□□□ -0.35
TSPAN4-220ENST00000532375 RIMKLAQ8IXN7 391 aa12.88□□□□□ -0.35
TSPAN4-220ENST00000532375 SAMD14Q8IZD0 417 aaPredicted RBP12.88□□□□□ -0.35
TSPAN4-220ENST00000532375 TMEM156Q8N614 296 aa12.88□□□□□ -0.35
TSPAN4-220ENST00000532375 GALNT11Q8NCW6 608 aa12.88□□□□□ -0.35
TSPAN4-220ENST00000532375 OR9A2Q8NGT5 310 aa12.88□□□□□ -0.35
TSPAN4-220ENST00000532375 CLHC1Q8NHS4 586 aa12.88□□□□□ -0.35
TSPAN4-220ENST00000532375 RAB3IL1Q8TBN0 382 aa12.88□□□□□ -0.35
TSPAN4-220ENST00000532375 GFM2Q969S9 779 aaKnown RBP12.88□□□□□ -0.35
TSPAN4-220ENST00000532375 TP53INP1Q96A56 240 aa12.88□□□□□ -0.35
TSPAN4-220ENST00000532375 BRINP2Q9C0B6 783 aa12.88□□□□□ -0.35
TSPAN4-220ENST00000532375 GLIPR2Q9H4G4 154 aa12.88□□□□□ -0.35
TSPAN4-220ENST00000532375 REEP4Q9H6H4 257 aa12.88□□□□□ -0.35
TSPAN4-220ENST00000532375 MANSC1Q9H8J5 431 aa12.88□□□□□ -0.35
TSPAN4-220ENST00000532375 AKTIPQ9H8T0 292 aa12.88□□□□□ -0.35
TSPAN4-220ENST00000532375 KLHL1Q9NR64 748 aa12.88□□□□□ -0.35
TSPAN4-220ENST00000532375 DEPPQ9NTK1 212 aa12.88□□□□□ -0.35
TSPAN4-220ENST00000532375 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.88□□□□□ -0.35
TSPAN4-220ENST00000532375 THAP1Q9NVV9 213 aa12.88□□□□□ -0.35
TSPAN4-220ENST00000532375 NKIRAS1Q9NYS0 192 aa12.88□□□□□ -0.35
TSPAN4-220ENST00000532375 CLEC18AA5D8T8 446 aa12.87□□□□□ -0.35
TSPAN4-220ENST00000532375 ZNF195O14628 629 aa12.87□□□□□ -0.35
TSPAN4-220ENST00000532375 KLF11O14901 512 aa12.87□□□□□ -0.35
TSPAN4-220ENST00000532375 AKAP10O43572 662 aa12.87□□□□□ -0.35
TSPAN4-220ENST00000532375 PLOD3O60568 738 aa12.87□□□□□ -0.35
TSPAN4-220ENST00000532375 NME6O75414 186 aaPredicted RBP12.87□□□□□ -0.35
TSPAN4-220ENST00000532375 LRATO95237 230 aa12.87□□□□□ -0.35
TSPAN4-220ENST00000532375 RASAL1O95294 804 aa12.87□□□□□ -0.35
TSPAN4-220ENST00000532375 MST1P26927 711 aa12.87□□□□□ -0.35
TSPAN4-220ENST00000532375 UQCRFS1P47985 274 aa12.87□□□□□ -0.35
TSPAN4-220ENST00000532375 EMX2Q04743 252 aa12.87□□□□□ -0.35
TSPAN4-220ENST00000532375 GTF3C1Q12789 2109 aa12.87□□□□□ -0.35
TSPAN4-220ENST00000532375 PDCD2Q16342 344 aaPredicted RBP12.87□□□□□ -0.35
TSPAN4-220ENST00000532375 SMU1Q2TAY7 513 aa12.87□□□□□ -0.35
TSPAN4-220ENST00000532375 ATP6AP1LQ52LC2 224 aa12.87□□□□□ -0.35
TSPAN4-220ENST00000532375 IL23RQ5VWK5 629 aa12.87□□□□□ -0.35
TSPAN4-220ENST00000532375 ANKRD26P1Q6NSI1 321 aa12.87□□□□□ -0.35
TSPAN4-220ENST00000532375 CLEC18BQ6UXF7 455 aa12.87□□□□□ -0.35
TSPAN4-220ENST00000532375 LARP4Q71RC2 724 aaKnown RBP eCLIP12.87□□□□□ -0.352e-6■■■■■ 32.5
TSPAN4-220ENST00000532375 SLC29A4Q7RTT9 530 aa12.87□□□□□ -0.35
TSPAN4-220ENST00000532375 GPALPP1Q8IXQ4 340 aa12.87□□□□□ -0.35
TSPAN4-220ENST00000532375 CYP4Z2PQ8N1L4 340 aa12.87□□□□□ -0.35
TSPAN4-220ENST00000532375 SLC15A4Q8N697 577 aa12.87□□□□□ -0.35
TSPAN4-220ENST00000532375 HORMAD2Q8N7B1 307 aa12.87□□□□□ -0.35
TSPAN4-220ENST00000532375 CLEC18CQ8NCF0 446 aa12.87□□□□□ -0.35
TSPAN4-220ENST00000532375 OR7G2Q8NG99 324 aa12.87□□□□□ -0.35
TSPAN4-220ENST00000532375 DNAJB8Q8NHS0 232 aa12.87□□□□□ -0.35
TSPAN4-220ENST00000532375 CDC26Q8NHZ8 85 aa12.87□□□□□ -0.35
TSPAN4-220ENST00000532375 ASB15Q8WXK1 588 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms