RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 Q9N2K0 584 aa3.05□□□□□ -1.92
PTPRK-220ENST00000531466 FARSBQ9NSD9 589 aaKnown RBP3.05□□□□□ -1.92
PTPRK-220ENST00000531466 AGPAT5Q9NUQ2 364 aa3.05□□□□□ -1.92
PTPRK-220ENST00000531466 ABCB8Q9NUT2 735 aa3.05□□□□□ -1.92
PTPRK-220ENST00000531466 STX18Q9P2W9 335 aaKnown RBP3.05□□□□□ -1.92
PTPRK-220ENST00000531466 CRNNQ9UBG3 495 aaPredicted RBP3.05□□□□□ -1.92
PTPRK-220ENST00000531466 DNAJB9Q9UBS3 223 aa3.05□□□□□ -1.92
PTPRK-220ENST00000531466 RPH3AQ9Y2J0 694 aaPredicted RBP3.05□□□□□ -1.92
PTPRK-220ENST00000531466 TMED3Q9Y3Q3 217 aa3.05□□□□□ -1.92
PTPRK-220ENST00000531466 CLCA3PQ9Y6N3 262 aa3.05□□□□□ -1.92
PTPRK-220ENST00000531466 FHAD1B1AJZ9 1412 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 SH3TC1Q8TE82 1336 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 IGHV3-38A0A0C4DH36 116 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 GOLGA8QA0A0J9YX86 632 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 TRBC2A0A5B9 178 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 ARHGEF37A1IGU5 675 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 GOLGA8OA6NCC3 632 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 SLC15A5A6NIM6 579 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 GOLGA8NF8WBI6 632 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 H3BQV1 296 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 GOLGA8MH3BSY2 632 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 GOLGA8RI6L899 631 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 HDAC3O15379 428 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 TRIM3O75382 744 aaPredicted RBP3.04□□□□□ -1.92
PTPRK-220ENST00000531466 IDH1O75874 414 aaKnown RBP3.04□□□□□ -1.92
PTPRK-220ENST00000531466 CLTAP09496 248 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 ANPEPP15144 967 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 EZRP15311 586 aaKnown RBP3.04□□□□□ -1.92
PTPRK-220ENST00000531466 PSMA2P25787 234 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 NMT1P30419 496 aaKnown RBP3.04□□□□□ -1.92
PTPRK-220ENST00000531466 RRM2P31350 389 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 CCR1P32246 355 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 PCGF2P35227 344 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 MAGEA1P43355 309 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 ACADSBP45954 432 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 PPP5CP53041 499 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 NDUFV3P56181 108 aaKnown RBP3.04□□□□□ -1.92
PTPRK-220ENST00000531466 RAB14P61106 215 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 MYL7Q01449 175 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 KDSRQ06136 332 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 DMC1Q14565 340 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 CHRNA6Q15825 494 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 CBWD6Q4V339 395 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 HERC4Q5GLZ8 1057 aaPredicted RBP3.04□□□□□ -1.92
PTPRK-220ENST00000531466 CBWD3Q5JTY5 395 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 LIN9Q5TKA1 542 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 AGAP7PQ5VUJ5 663 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 CAVIN1Q6NZI2 390 aaKnown RBP3.04□□□□□ -1.92
PTPRK-220ENST00000531466 BLOC1S2Q6QNY1 142 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 AFTPHQ6ULP2 937 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 RBPMS2Q6ZRY4 209 aaKnown RBP3.04□□□□□ -1.92
PTPRK-220ENST00000531466 PLPPR4Q7Z2D5 763 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 TMPRSS11BQ86T26 416 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 TLK2Q86UE8 772 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 AKAP14Q86UN6 197 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 AACSQ86V21 672 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 CDKL3Q8IVW4 592 aaPredicted RBP3.04□□□□□ -1.92
PTPRK-220ENST00000531466 MFN1Q8IWA4 741 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 SIX6OS1Q8N1H7 587 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 PYROXD2Q8N2H3 581 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 SLC43A2Q8N370 569 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 OR7A2PQ8NGA2 310 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 OR52M1Q8NGK5 317 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 OR9A1PQ8NGU1 263 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 GANCQ8TET4 914 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 CCDC12Q8WUD4 166 aaPredicted RBP3.04□□□□□ -1.92
PTPRK-220ENST00000531466 PDCD6IPQ8WUM4 868 aaKnown RBP3.04□□□□□ -1.92
PTPRK-220ENST00000531466 DYDC1Q8WWB3 177 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 PTERQ96BW5 349 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 EEF2KMTQ96G04 330 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 ZNF560Q96MR9 790 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 TRNT1Q96Q11 434 aaKnown RBP3.04□□□□□ -1.92
PTPRK-220ENST00000531466 ZBTB18Q99592 522 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 LLPHQ9BRT6 129 aaKnown RBP3.04□□□□□ -1.92
PTPRK-220ENST00000531466 C9orf16Q9BUW7 83 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 AGPAT3Q9NRZ7 376 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 KLHL28Q9NXS3 571 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 TMOD3Q9NYL9 352 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 C5AR2Q9P296 337 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 APPL1Q9UKG1 709 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 STX8Q9UNK0 236 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 NUDCQ9Y266 331 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 NME7Q9Y5B8 376 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 POMT1Q9Y6A1 747 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 SPACA6W5XKT8 324 aa3.04□□□□□ -1.92
PTPRK-220ENST00000531466 ELP1O95163 1332 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 FRMPD4Q14CM0 1322 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 CCDC171Q6TFL3 1326 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 IGSF1Q8N6C5 1336 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 TRAV34A0A0B4J273 112 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 SERTM2A0A1B0GWG4 89 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 A0A1B0GWJ7 208 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 A0A1W2PPW3 197 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 MACROD2A1Z1Q3 448 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 TMEM221A6NGB7 291 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 E9PAM4 449 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 SPECC1L-ADORA2AF8WAN1 911 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 CXCL11O14625 94 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 TLX2O43763 284 aaPredicted RBP3.03□□□□□ -1.92
PTPRK-220ENST00000531466 ACSL4O60488 711 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms