RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 SULT1C3Q6IMI6 304 aa8.42□□□□□ -1.06
NEDD8-206ENST00000531430 HMBOX1Q6NT76 420 aa8.42□□□□□ -1.06
NEDD8-206ENST00000531430 CYP20A1Q6UW02 462 aa8.42□□□□□ -1.06
NEDD8-206ENST00000531430 ENPP6Q6UWR7 440 aa8.42□□□□□ -1.06
NEDD8-206ENST00000531430 GALNT7Q86SF2 657 aa8.42□□□□□ -1.06
NEDD8-206ENST00000531430 ZC3HC1Q86WB0 502 aaKnown RBP8.42□□□□□ -1.06
NEDD8-206ENST00000531430 GRAMD2AQ8IUY3 354 aa8.42□□□□□ -1.06
NEDD8-206ENST00000531430 TRIM42Q8IWZ5 723 aa8.42□□□□□ -1.06
NEDD8-206ENST00000531430 ST13P4Q8IZP2 240 aaPredicted RBP8.42□□□□□ -1.06
NEDD8-206ENST00000531430 PDIK1LQ8N165 341 aa8.42□□□□□ -1.06
NEDD8-206ENST00000531430 FAM83FQ8NEG4 500 aaPredicted RBP8.42□□□□□ -1.06
NEDD8-206ENST00000531430 ZPLD1Q8TCW7 415 aa8.42□□□□□ -1.06
NEDD8-206ENST00000531430 ANKRD7Q92527 254 aa8.42□□□□□ -1.06
NEDD8-206ENST00000531430 UBE2E3Q969T4 207 aa8.42□□□□□ -1.06
NEDD8-206ENST00000531430 PBKQ96KB5 322 aa8.42□□□□□ -1.06
NEDD8-206ENST00000531430 NAP1L3Q99457 506 aaPredicted RBP8.42□□□□□ -1.06
NEDD8-206ENST00000531430 CENPKQ9BS16 269 aa8.42□□□□□ -1.06
NEDD8-206ENST00000531430 MED18Q9BUE0 208 aa8.42□□□□□ -1.06
NEDD8-206ENST00000531430 SFXN3Q9BWM7 321 aa8.42□□□□□ -1.06
NEDD8-206ENST00000531430 ANGPTL4Q9BY76 406 aa8.42□□□□□ -1.06
NEDD8-206ENST00000531430 EHD1Q9H4M9 534 aa8.42□□□□□ -1.06
NEDD8-206ENST00000531430 CAB39LQ9H9S4 337 aa8.42□□□□□ -1.06
NEDD8-206ENST00000531430 WDR41Q9HAD4 459 aa8.42□□□□□ -1.06
NEDD8-206ENST00000531430 SERHLQ9NQF3 203 aa8.42□□□□□ -1.06
NEDD8-206ENST00000531430 ZNF226Q9NYT6 803 aa8.42□□□□□ -1.06
NEDD8-206ENST00000531430 BCAP29Q9UHQ4 241 aa8.42□□□□□ -1.06
NEDD8-206ENST00000531430 PHF11Q9UIL8 331 aa8.42□□□□□ -1.06
NEDD8-206ENST00000531430 RNF112Q9ULX5 631 aa8.42□□□□□ -1.06
NEDD8-206ENST00000531430 ANGPTL3Q9Y5C1 460 aa8.42□□□□□ -1.06
NEDD8-206ENST00000531430 FBN1P35555 2871 aaKnown RBP8.41□□□□□ -1.06
NEDD8-206ENST00000531430 ATRQ13535 2644 aa8.41□□□□□ -1.06
NEDD8-206ENST00000531430 DOCK7Q96N67 2140 aa8.41□□□□□ -1.06
NEDD8-206ENST00000531430 UQCRHLA0A096LP55 91 aa8.41□□□□□ -1.06
NEDD8-206ENST00000531430 GOLGA6L10A0A0M3HER8 536 aa8.41□□□□□ -1.06
NEDD8-206ENST00000531430 OR6C76A6NM76 312 aa8.41□□□□□ -1.06
NEDD8-206ENST00000531430 A8MXE2 369 aa8.41□□□□□ -1.06
NEDD8-206ENST00000531430 PHGDHO43175 533 aaKnown RBP8.41□□□□□ -1.06
NEDD8-206ENST00000531430 GBAP04062 536 aa8.41□□□□□ -1.06
NEDD8-206ENST00000531430 NID1P14543 1247 aa8.41□□□□□ -1.06
NEDD8-206ENST00000531430 PIK3R1P27986 724 aa8.41□□□□□ -1.06
NEDD8-206ENST00000531430 TMED10P49755 219 aaKnown RBP8.41□□□□□ -1.06
NEDD8-206ENST00000531430 HNRNPH2P55795 449 aaKnown RBP8.41□□□□□ -1.06
NEDD8-206ENST00000531430 SIRPAP78324 504 aa8.41□□□□□ -1.06
NEDD8-206ENST00000531430 IGLV3-21P80748 117 aaPredicted RBP8.41□□□□□ -1.06
NEDD8-206ENST00000531430 TNFRSF17Q02223 184 aa8.41□□□□□ -1.06
NEDD8-206ENST00000531430 GAB1Q13480 694 aa8.41□□□□□ -1.06
NEDD8-206ENST00000531430 FNDC7Q5VTL7 733 aa8.41□□□□□ -1.06
NEDD8-206ENST00000531430 ALKBH2Q6NS38 261 aa8.41□□□□□ -1.06
NEDD8-206ENST00000531430 PRSS57Q6UWY2 283 aa8.41□□□□□ -1.06
NEDD8-206ENST00000531430 ZNF550Q7Z398 422 aa8.41□□□□□ -1.06
NEDD8-206ENST00000531430 MAPK1IP1LQ8NDC0 245 aa8.41□□□□□ -1.06
NEDD8-206ENST00000531430 OR7G3Q8NG95 312 aa8.41□□□□□ -1.06
NEDD8-206ENST00000531430 WNT2BQ93097 391 aa8.41□□□□□ -1.06
NEDD8-206ENST00000531430 TP53INP1Q96A56 240 aa8.41□□□□□ -1.06
NEDD8-206ENST00000531430 MTERF1Q99551 399 aaKnown RBP8.41□□□□□ -1.06
NEDD8-206ENST00000531430 PIP5K1AQ99755 562 aa8.41□□□□□ -1.06
NEDD8-206ENST00000531430 PELOQ9BRX2 385 aaKnown RBP8.41□□□□□ -1.06
NEDD8-206ENST00000531430 CD244Q9BZW8 370 aa8.41□□□□□ -1.06
NEDD8-206ENST00000531430 UBQLN3Q9H347 655 aa8.41□□□□□ -1.06
NEDD8-206ENST00000531430 PIGMQ9H3S5 423 aa8.41□□□□□ -1.06
NEDD8-206ENST00000531430 KLRF1Q9NZS2 232 aa8.41□□□□□ -1.06
NEDD8-206ENST00000531430 MTO1Q9Y2Z2 717 aaKnown RBP8.41□□□□□ -1.06
NEDD8-206ENST00000531430 WIF1Q9Y5W5 379 aa8.41□□□□□ -1.06
NEDD8-206ENST00000531430 A0A1W2PR48 441 aa8.4□□□□□ -1.06
NEDD8-206ENST00000531430 SUPT3HB4E1H0 165 aa8.4□□□□□ -1.06
NEDD8-206ENST00000531430 PGRMC1O00264 195 aaKnown RBP8.4□□□□□ -1.06
NEDD8-206ENST00000531430 PGRMC2O15173 223 aa8.4□□□□□ -1.06
NEDD8-206ENST00000531430 CTIFO43310 598 aaKnown RBP8.4□□□□□ -1.06
NEDD8-206ENST00000531430 ICOSLGO75144 302 aa8.4□□□□□ -1.06
NEDD8-206ENST00000531430 SUPT3HO75486 399 aa8.4□□□□□ -1.06
NEDD8-206ENST00000531430 FAM58BPP0C7Q3 252 aa8.4□□□□□ -1.06
NEDD8-206ENST00000531430 CPN1P15169 458 aa8.4□□□□□ -1.06
NEDD8-206ENST00000531430 PTPN6P29350 595 aa8.4□□□□□ -1.06
NEDD8-206ENST00000531430 GGT5P36269 586 aa8.4□□□□□ -1.06
NEDD8-206ENST00000531430 ARL1P40616 181 aaPredicted RBP8.4□□□□□ -1.06
NEDD8-206ENST00000531430 PTH2RP49190 550 aa8.4□□□□□ -1.06
NEDD8-206ENST00000531430 OR4D1Q15615 310 aa8.4□□□□□ -1.06
NEDD8-206ENST00000531430 CYP1B1Q16678 543 aa8.4□□□□□ -1.06
NEDD8-206ENST00000531430 EXOC3L2Q2M3D2 409 aa8.4□□□□□ -1.06
NEDD8-206ENST00000531430 NHSL2Q5HYW2 709 aa8.4□□□□□ -1.06
NEDD8-206ENST00000531430 C10orf62Q5T681 223 aaPredicted RBP8.4□□□□□ -1.06
NEDD8-206ENST00000531430 OR5M10Q6IEU7 315 aa8.4□□□□□ -1.06
NEDD8-206ENST00000531430 PLEKHM3Q6ZWE6 761 aa8.4□□□□□ -1.06
NEDD8-206ENST00000531430 UBQLNLQ8IYU4 475 aa8.4□□□□□ -1.06
NEDD8-206ENST00000531430 TEX9Q8N6V9 391 aa8.4□□□□□ -1.06
NEDD8-206ENST00000531430 ADCY4Q8NFM4 1077 aa8.4□□□□□ -1.06
NEDD8-206ENST00000531430 HUS1BQ8NHY5 278 aa8.4□□□□□ -1.06
NEDD8-206ENST00000531430 WDR34Q96EX3 536 aa8.4□□□□□ -1.06
NEDD8-206ENST00000531430 BRINP2Q9C0B6 783 aa8.4□□□□□ -1.06
NEDD8-206ENST00000531430 KLHL4Q9C0H6 718 aa8.4□□□□□ -1.06
NEDD8-206ENST00000531430 DERL2Q9GZP9 239 aa8.4□□□□□ -1.06
NEDD8-206ENST00000531430 DDX47Q9H0S4 455 aaKnown RBP8.4□□□□□ -1.06
NEDD8-206ENST00000531430 OPN3Q9H1Y3 402 aaPredicted RBP8.4□□□□□ -1.06
NEDD8-206ENST00000531430 OR10A5Q9H207 317 aa8.4□□□□□ -1.06
NEDD8-206ENST00000531430 ACBD3Q9H3P7 528 aa8.4□□□□□ -1.06
NEDD8-206ENST00000531430 PLAC1Q9HBJ0 212 aa8.4□□□□□ -1.06
NEDD8-206ENST00000531430 GALNT9Q9HCQ5 603 aa8.4□□□□□ -1.06
NEDD8-206ENST00000531430 TAS2R10Q9NYW0 307 aa8.4□□□□□ -1.06
NEDD8-206ENST00000531430 EHD3Q9NZN3 535 aa8.4□□□□□ -1.06
NEDD8-206ENST00000531430 TXNDC16Q9P2K2 825 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms