RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 C12orf73Q69YU5 71 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 SLC27A1Q6PCB7 646 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 DOK6Q6PKX4 331 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 SLC16A13Q7RTY0 426 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 LDLRAD3Q86YD5 345 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 PXT1Q8NFP0 134 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 OR52B6Q8NGF0 335 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 POF1BQ8WVV4 589 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 SLC39A7Q92504 469 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 FATE1Q969F0 183 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 ZBED3Q96IU2 234 aaPredicted RBP7.72□□□□□ -1.17
CSDE1-214ENST00000530886 SLC6A18Q96N87 628 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 C11orf49Q9H6J7 331 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 NUDT4Q9NZJ9 180 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 EXTL2Q9UBQ6 330 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 MALT1Q9UDY8 824 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 TESQ9UGI8 421 aaKnown RBP7.72□□□□□ -1.17
CSDE1-214ENST00000530886 PPM1DO15297 605 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 POP7O75817 140 aaKnown RBP7.72□□□□□ -1.17
CSDE1-214ENST00000530886 ZNF806P0C7X5 589 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 PAICSP22234 425 aaKnown RBP7.72□□□□□ -1.17
CSDE1-214ENST00000530886 MST1P26927 711 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 TRHRP34981 398 aaPredicted RBP7.72□□□□□ -1.17
CSDE1-214ENST00000530886 RGS4P49798 205 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 SMSP52788 366 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 NUBP1P53384 320 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 WNT4P56705 351 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 RPS25P62851 125 aaKnown RBP7.72□□□□□ -1.17
CSDE1-214ENST00000530886 SHC2P98077 582 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 CDNFQ49AH0 187 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 MINDY4Q4G0A6 757 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 ARSIQ5FYB1 569 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 OAFQ86UD1 273 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 STK40Q8N2I9 435 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 RNF149Q8NC42 400 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 BPIFCQ8NFQ6 507 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 KCTD13Q8WZ19 329 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 OR4K3Q96R72 315 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 EGLN1Q9GZT9 426 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 OSGEPL1Q9H4B0 414 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 HMX1Q9NP08 348 aaPredicted RBP7.72□□□□□ -1.17
CSDE1-214ENST00000530886 CCNL1Q9UK58 526 aaPredicted RBP7.72□□□□□ -1.17
CSDE1-214ENST00000530886 USP21Q9UK80 565 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 CARHSP1Q9Y2V2 147 aaKnown RBP7.72□□□□□ -1.17
CSDE1-214ENST00000530886 LOC105369274A0A096LPK9 316 aa7.71□□□□□ -1.17
CSDE1-214ENST00000530886 A0A1B0GUH1 482 aa7.71□□□□□ -1.17
CSDE1-214ENST00000530886 ZNF593O00488 134 aaPredicted RBP7.71□□□□□ -1.17
CSDE1-214ENST00000530886 SUV39H1O43463 412 aa7.71□□□□□ -1.17
CSDE1-214ENST00000530886 RAB36O95755 333 aa7.71□□□□□ -1.17
CSDE1-214ENST00000530886 RB1P06400 928 aa7.71□□□□□ -1.17
CSDE1-214ENST00000530886 ACADLP28330 430 aa7.71□□□□□ -1.17
CSDE1-214ENST00000530886 CNR2P34972 360 aa7.71□□□□□ -1.17
CSDE1-214ENST00000530886 PTGFRP43088 359 aa7.71□□□□□ -1.17
CSDE1-214ENST00000530886 PITPNBP48739 271 aa7.71□□□□□ -1.17
CSDE1-214ENST00000530886 ARSDP51689 593 aa7.71□□□□□ -1.17
CSDE1-214ENST00000530886 CAPZA1P52907 286 aa7.71□□□□□ -1.17
CSDE1-214ENST00000530886 RAB4BP61018 213 aa7.71□□□□□ -1.17
CSDE1-214ENST00000530886 MTAPQ13126 283 aa7.71□□□□□ -1.17
CSDE1-214ENST00000530886 DYRK1AQ13627 763 aa7.71□□□□□ -1.17
CSDE1-214ENST00000530886 TMEM255AQ5JRV8 349 aa7.71□□□□□ -1.17
CSDE1-214ENST00000530886 C9orf131Q5VYM1 1079 aa7.71□□□□□ -1.17
CSDE1-214ENST00000530886 PDE12Q6L8Q7 609 aaKnown RBP7.71□□□□□ -1.17
CSDE1-214ENST00000530886 LIN54Q6MZP7 749 aa7.71□□□□□ -1.17
CSDE1-214ENST00000530886 USP30Q70CQ3 517 aa7.71□□□□□ -1.17
CSDE1-214ENST00000530886 TMUB2Q71RG4 321 aa7.71□□□□□ -1.17
CSDE1-214ENST00000530886 SLITRK4Q8IW52 837 aa7.71□□□□□ -1.17
CSDE1-214ENST00000530886 OR4N4Q8N0Y3 316 aa7.71□□□□□ -1.17
CSDE1-214ENST00000530886 CPXCR1Q8N123 301 aa7.71□□□□□ -1.17
CSDE1-214ENST00000530886 ZNF687Q8N1G0 1237 aa7.71□□□□□ -1.17
CSDE1-214ENST00000530886 CPXM2Q8N436 756 aa7.71□□□□□ -1.17
CSDE1-214ENST00000530886 OR6K3Q8NGY3 331 aa7.71□□□□□ -1.17
CSDE1-214ENST00000530886 OR14A16Q8NHC5 309 aa7.71□□□□□ -1.17
CSDE1-214ENST00000530886 KAT2AQ92830 837 aa7.71□□□□□ -1.17
CSDE1-214ENST00000530886 MOGAT1Q96PD6 335 aa7.71□□□□□ -1.17
CSDE1-214ENST00000530886 CMSS1Q9BQ75 279 aaKnown RBP7.71□□□□□ -1.17
CSDE1-214ENST00000530886 ENAMQ9NRM1 1142 aa7.71□□□□□ -1.17
CSDE1-214ENST00000530886 METTL1Q9UBP6 276 aaKnown RBP7.71□□□□□ -1.17
CSDE1-214ENST00000530886 FBXL3Q9UKT7 428 aa7.71□□□□□ -1.17
CSDE1-214ENST00000530886 IRGMA1A4Y4 181 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 AGAP14A8MT82 685 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 NEDD8-MDP1E9PL57 170 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 NPIPB8E9PQR5 432 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 CASKO14936 926 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 TO15178 435 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 SSNA1O43805 119 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 PRAMEF2O60811 474 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 OTCP00480 354 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 HIST1H2ABP04908 130 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 ALDOBP05062 364 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 EDNRBP24530 442 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 CDKN2CP42773 168 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 RIDAP52758 137 aaKnown RBP7.71□□□□□ -1.18
CSDE1-214ENST00000530886 ARFIP1P53367 373 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 SPCS3P61009 180 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 SEC61A1P61619 476 aaKnown RBP7.71□□□□□ -1.18
CSDE1-214ENST00000530886 AP1S1P61966 158 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 FABP5Q01469 135 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 NRG1Q02297 640 aaPredicted RBP7.71□□□□□ -1.18
CSDE1-214ENST00000530886 ACSM1Q08AH1 577 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 SLC22A10Q63ZE4 541 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms