RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 PIK3IP1Q96FE7 263 aa8.2□□□□□ -1.1
VPS11-203ENST00000529545 TMEM41AQ96HV5 264 aa8.2□□□□□ -1.1
VPS11-203ENST00000529545 MED18Q9BUE0 208 aa8.2□□□□□ -1.1
VPS11-203ENST00000529545 MS4A8Q9BY19 250 aa8.2□□□□□ -1.1
VPS11-203ENST00000529545 ANGPTL4Q9BY76 406 aa8.2□□□□□ -1.1
VPS11-203ENST00000529545 UBQLN3Q9H347 655 aa8.2□□□□□ -1.1
VPS11-203ENST00000529545 PACSIN3Q9UKS6 424 aa8.2□□□□□ -1.1
VPS11-203ENST00000529545 ZNF490Q9ULM2 529 aaPredicted RBP8.2□□□□□ -1.1
VPS11-203ENST00000529545 TESMINQ9Y4I5 508 aa8.2□□□□□ -1.1
VPS11-203ENST00000529545 NPFFR2Q9Y5X5 522 aa8.2□□□□□ -1.1
VPS11-203ENST00000529545 ATRQ13535 2644 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 CHD3Q12873 2000 aaKnown RBP8.19□□□□□ -1.1
VPS11-203ENST00000529545 A8MXE2 369 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 GNB5O14775 395 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 MSTNO14793 375 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 SH3BGRLO75368 114 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 STK16O75716 305 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 SCELO95171 688 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 TGFB1P01137 390 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 S100BP04271 92 aaPredicted RBP8.19□□□□□ -1.1
VPS11-203ENST00000529545 PCNAP12004 261 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 CPN1P15169 458 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 CHMP24386 653 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 SERPINB1P30740 379 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 MC3RP41968 323 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 RAP1GDS1P52306 607 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 NAGLUP54802 743 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 SLC12A2P55011 1212 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 SLC37A1P57057 533 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 SRYQ05066 204 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 SLAMF1Q13291 335 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 PPP1R7Q15435 360 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 TGFBIQ15582 683 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 PDK4Q16654 411 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 SPRED3Q2MJR0 410 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 KBTBD12Q3ZCT8 623 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 DCST1Q5T197 706 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 C6orf163Q5TEZ5 329 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 BICRALQ6AI39 1079 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 TIGD3Q6B0B8 471 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 OR4C11Q6IEV9 310 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 ADNP2Q6IQ32 1131 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 HMBOX1Q6NT76 420 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 PODNL1Q6PEZ8 512 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 CCDC137Q6PK04 289 aaKnown RBP8.19□□□□□ -1.1
VPS11-203ENST00000529545 TMEM64Q6YI46 380 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 DGAT2L6Q6ZPD8 337 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 UBE3DQ7Z6J8 389 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 YRDCQ86U90 279 aaKnown RBP8.19□□□□□ -1.1
VPS11-203ENST00000529545 GPR180Q86V85 440 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 FAM83FQ8NEG4 500 aaPredicted RBP8.19□□□□□ -1.1
VPS11-203ENST00000529545 TRIM58Q8NG06 486 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 DOK4Q8TEW6 326 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 GRK7Q8WTQ7 553 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 SLC44A1Q8WWI5 657 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 DTNBP1Q96EV8 351 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 WDR34Q96EX3 536 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 CMTM7Q96FZ5 175 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 CFAP36Q96G28 342 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 FAM111AQ96PZ2 611 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 NAP1L3Q99457 506 aaPredicted RBP8.19□□□□□ -1.1
VPS11-203ENST00000529545 TUBA1CQ9BQE3 449 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 METTL7AQ9H8H3 244 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 WDR41Q9HAD4 459 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 KLHL28Q9NXS3 571 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 SLC17A6Q9P2U8 582 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 FETUBQ9UGM5 382 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 VPS13CQ709C8 3753 aa8.19□□□□□ -1.1
VPS11-203ENST00000529545 STAB1Q9NY15 2570 aa8.18□□□□□ -1.1
VPS11-203ENST00000529545 FBN1P35555 2871 aaKnown RBP8.18□□□□□ -1.1
VPS11-203ENST00000529545 FAM95CA0A1B0GW59 222 aa8.18□□□□□ -1.1
VPS11-203ENST00000529545 DEFB108AA8MXU0 73 aa8.18□□□□□ -1.1
VPS11-203ENST00000529545 GOLGA6L6A8MZA4 724 aa8.18□□□□□ -1.1
VPS11-203ENST00000529545 SAP18O00422 153 aaKnown RBP8.18□□□□□ -1.1
VPS11-203ENST00000529545 SMNDC1O75940 238 aaKnown RBP eCLIP8.18□□□□□ -1.1
VPS11-203ENST00000529545 GPR75O95800 540 aa8.18□□□□□ -1.1
VPS11-203ENST00000529545 C8BP07358 591 aa8.18□□□□□ -1.1
VPS11-203ENST00000529545 CRYGSP22914 178 aa8.18□□□□□ -1.1
VPS11-203ENST00000529545 PTPN6P29350 595 aa8.18□□□□□ -1.1
VPS11-203ENST00000529545 GALNSP34059 522 aa8.18□□□□□ -1.1
VPS11-203ENST00000529545 GGT5P36269 586 aa8.18□□□□□ -1.1
VPS11-203ENST00000529545 CASP3P42574 277 aa8.18□□□□□ -1.1
VPS11-203ENST00000529545 SLCO1A2P46721 670 aa8.18□□□□□ -1.1
VPS11-203ENST00000529545 HSPA7P48741 367 aa8.18□□□□□ -1.1
VPS11-203ENST00000529545 PTH2RP49190 550 aa8.18□□□□□ -1.1
VPS11-203ENST00000529545 PCYT1AP49585 367 aa8.18□□□□□ -1.1
VPS11-203ENST00000529545 TNFRSF17Q02223 184 aa8.18□□□□□ -1.1
VPS11-203ENST00000529545 CHIT1Q13231 466 aa8.18□□□□□ -1.1
VPS11-203ENST00000529545 CDKL4Q5MAI5 379 aa8.18□□□□□ -1.1
VPS11-203ENST00000529545 RNASEH2BQ5TBB1 312 aaKnown RBP8.18□□□□□ -1.1
VPS11-203ENST00000529545 FNDC7Q5VTL7 733 aa8.18□□□□□ -1.1
VPS11-203ENST00000529545 KHDRBS2Q5VWX1 349 aaKnown RBP8.18□□□□□ -1.1
VPS11-203ENST00000529545 SULT1C3Q6IMI6 304 aa8.18□□□□□ -1.1
VPS11-203ENST00000529545 MED27Q6P2C8 311 aa8.18□□□□□ -1.1
VPS11-203ENST00000529545 ANGPTL8Q6UXH0 198 aa8.18□□□□□ -1.1
VPS11-203ENST00000529545 PLEKHM3Q6ZWE6 761 aa8.18□□□□□ -1.1
VPS11-203ENST00000529545 CHMP1BQ7LBR1 199 aa8.18□□□□□ -1.1
VPS11-203ENST00000529545 P4HA3Q7Z4N8 544 aa8.18□□□□□ -1.1
VPS11-203ENST00000529545 GPSM1Q86YR5 675 aa8.18□□□□□ -1.1
VPS11-203ENST00000529545 GRAMD2AQ8IUY3 354 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms