RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 SLC15A4Q8N697 577 aa12.39□□□□□ -0.43
CAPN1-215ENST00000528396 POGLUT1Q8NBL1 392 aa12.39□□□□□ -0.43
CAPN1-215ENST00000528396 PSD4Q8NDX1 1056 aa12.39□□□□□ -0.43
CAPN1-215ENST00000528396 FAM13CQ8NE31 585 aa12.39□□□□□ -0.43
CAPN1-215ENST00000528396 ADCY4Q8NFM4 1077 aa12.39□□□□□ -0.43
CAPN1-215ENST00000528396 MGARPQ8TDB4 240 aa12.39□□□□□ -0.43
CAPN1-215ENST00000528396 SGCZQ96LD1 299 aa12.39□□□□□ -0.43
CAPN1-215ENST00000528396 PPP3R2Q96LZ3 170 aa12.39□□□□□ -0.43
CAPN1-215ENST00000528396 SLX1AQ9BQ83 275 aa12.39□□□□□ -0.43
CAPN1-215ENST00000528396 HECTD1Q9ULT8 2610 aa12.39□□□□□ -0.43
CAPN1-215ENST00000528396 TMEM120BA0PK00 339 aa12.38□□□□□ -0.43
CAPN1-215ENST00000528396 CYSRT1A8MQ03 144 aa12.38□□□□□ -0.43
CAPN1-215ENST00000528396 TFECO14948 347 aaPredicted RBP12.38□□□□□ -0.43
CAPN1-215ENST00000528396 UNC5CO95185 931 aa12.38□□□□□ -0.43
CAPN1-215ENST00000528396 CT62P0C5K7 136 aa12.38□□□□□ -0.43
CAPN1-215ENST00000528396 DDX5P17844 614 aaKnown RBP12.38□□□□□ -0.43
CAPN1-215ENST00000528396 PTGER1P34995 402 aa12.38□□□□□ -0.43
CAPN1-215ENST00000528396 TMED10P49755 219 aaKnown RBP12.38□□□□□ -0.43
CAPN1-215ENST00000528396 NR0B1P51843 470 aaKnown RBP12.38□□□□□ -0.43
CAPN1-215ENST00000528396 NCBP2P52298 156 aaKnown RBP eCLIP12.38□□□□□ -0.432e-8■□□□□ 10.4
CAPN1-215ENST00000528396 GPR85P60893 370 aa12.38□□□□□ -0.43
CAPN1-215ENST00000528396 ABCE1P61221 599 aaKnown RBP12.38□□□□□ -0.43
CAPN1-215ENST00000528396 MAGOHP61326 146 aaKnown RBP12.38□□□□□ -0.43
CAPN1-215ENST00000528396 PLGLB1Q02325 96 aa12.38□□□□□ -0.43
CAPN1-215ENST00000528396 SRSF11Q05519 484 aaKnown RBP12.38□□□□□ -0.43
CAPN1-215ENST00000528396 FUT7Q11130 342 aa12.38□□□□□ -0.43
CAPN1-215ENST00000528396 MAP4K2Q12851 820 aa12.38□□□□□ -0.43
CAPN1-215ENST00000528396 EBPQ15125 230 aaKnown RBP12.38□□□□□ -0.43
CAPN1-215ENST00000528396 LTB4RQ15722 352 aa12.38□□□□□ -0.43
CAPN1-215ENST00000528396 ATP6AP1LQ52LC2 224 aa12.38□□□□□ -0.43
CAPN1-215ENST00000528396 TNFAIP8L3Q5GJ75 292 aa12.38□□□□□ -0.43
CAPN1-215ENST00000528396 FAM111BQ6SJ93 734 aa12.38□□□□□ -0.43
CAPN1-215ENST00000528396 RNF165Q6ZSG1 346 aa12.38□□□□□ -0.43
CAPN1-215ENST00000528396 MDGA2Q7Z553 956 aa12.38□□□□□ -0.43
CAPN1-215ENST00000528396 SULF2Q8IWU5 870 aa12.38□□□□□ -0.43
CAPN1-215ENST00000528396 FAM9CQ8IZT9 166 aa12.38□□□□□ -0.43
CAPN1-215ENST00000528396 CPSF7Q8N684 471 aaKnown RBP12.38□□□□□ -0.43
CAPN1-215ENST00000528396 OR2T11Q8NH01 316 aa12.38□□□□□ -0.43
CAPN1-215ENST00000528396 SPACA9Q96E40 222 aaPredicted RBP12.38□□□□□ -0.43
CAPN1-215ENST00000528396 C11orf24Q96F05 449 aaPredicted RBP12.38□□□□□ -0.43
CAPN1-215ENST00000528396 CNRIP1Q96F85 164 aaPredicted RBP12.38□□□□□ -0.43
CAPN1-215ENST00000528396 TSPAN10Q9H1Z9 355 aaPredicted RBP12.38□□□□□ -0.43
CAPN1-215ENST00000528396 SACM1LQ9NTJ5 587 aa12.38□□□□□ -0.43
CAPN1-215ENST00000528396 RYDENQ9NUL5 291 aaKnown RBP12.38□□□□□ -0.43
CAPN1-215ENST00000528396 MAT2BQ9NZL9 334 aa12.38□□□□□ -0.43
CAPN1-215ENST00000528396 PRODH2Q9UF12 536 aa12.38□□□□□ -0.43
CAPN1-215ENST00000528396 ZDHHC2Q9UIJ5 367 aa12.38□□□□□ -0.43
CAPN1-215ENST00000528396 OSGIN2Q9Y236 505 aa12.38□□□□□ -0.43
CAPN1-215ENST00000528396 SPTAN1Q13813 2472 aaKnown RBP12.38□□□□□ -0.43
CAPN1-215ENST00000528396 ASPDHA6ND91 283 aa12.37□□□□□ -0.43
CAPN1-215ENST00000528396 NPIPA5E9PKD4 350 aa12.37□□□□□ -0.43
CAPN1-215ENST00000528396 ACOT7O00154 380 aa12.37□□□□□ -0.43
CAPN1-215ENST00000528396 TP53I11O14683 189 aa12.37□□□□□ -0.43
CAPN1-215ENST00000528396 LSM1O15116 133 aaKnown RBP12.37□□□□□ -0.43
CAPN1-215ENST00000528396 AKAP10O43572 662 aa12.37□□□□□ -0.43
CAPN1-215ENST00000528396 PEX11AO75192 247 aa12.37□□□□□ -0.43
CAPN1-215ENST00000528396 LYPLA1O75608 230 aaPredicted RBP12.37□□□□□ -0.43
CAPN1-215ENST00000528396 BCAS2O75934 225 aaPredicted RBP12.37□□□□□ -0.43
CAPN1-215ENST00000528396 LRATO95237 230 aa12.37□□□□□ -0.43
CAPN1-215ENST00000528396 BGNP21810 368 aa12.37□□□□□ -0.43
CAPN1-215ENST00000528396 HPCAL1P37235 193 aa12.37□□□□□ -0.43
CAPN1-215ENST00000528396 ASMTP46597 345 aa12.37□□□□□ -0.43
CAPN1-215ENST00000528396 SLC1A6P48664 564 aa12.37□□□□□ -0.43
CAPN1-215ENST00000528396 CASP6P55212 293 aa12.37□□□□□ -0.43
CAPN1-215ENST00000528396 RPP38P78345 283 aaKnown RBP12.37□□□□□ -0.43
CAPN1-215ENST00000528396 MRPS35P82673 323 aaKnown RBP12.37□□□□□ -0.43
CAPN1-215ENST00000528396 STX3Q13277 289 aa12.37□□□□□ -0.43
CAPN1-215ENST00000528396 UBAP2LQ14157 1087 aaKnown RBP12.37□□□□□ -0.43
CAPN1-215ENST00000528396 EXOSC7Q15024 291 aaKnown RBP12.37□□□□□ -0.43
CAPN1-215ENST00000528396 PRICKLE4Q2TBC4 344 aa12.37□□□□□ -0.43
CAPN1-215ENST00000528396 FAM71E1Q6IPT2 247 aa12.37□□□□□ -0.43
CAPN1-215ENST00000528396 GK5Q6ZS86 529 aa12.37□□□□□ -0.43
CAPN1-215ENST00000528396 Q6ZSR9 355 aa12.37□□□□□ -0.43
CAPN1-215ENST00000528396 FAM47EQ6ZV65 393 aa12.37□□□□□ -0.43
CAPN1-215ENST00000528396 ZNF227Q86WZ6 799 aa12.37□□□□□ -0.43
CAPN1-215ENST00000528396 GOLM1Q8NBJ4 401 aa12.37□□□□□ -0.43
CAPN1-215ENST00000528396 OR52R1Q8NGF1 315 aa12.37□□□□□ -0.43
CAPN1-215ENST00000528396 OR5M3Q8NGP4 307 aa12.37□□□□□ -0.43
CAPN1-215ENST00000528396 OR9A2Q8NGT5 310 aa12.37□□□□□ -0.43
CAPN1-215ENST00000528396 C16orf52Q8NHV5 167 aa12.37□□□□□ -0.43
CAPN1-215ENST00000528396 GFM2Q969S9 779 aaKnown RBP12.37□□□□□ -0.43
CAPN1-215ENST00000528396 TP53INP1Q96A56 240 aa12.37□□□□□ -0.43
CAPN1-215ENST00000528396 TUBGCP3Q96CW5 907 aa12.37□□□□□ -0.43
CAPN1-215ENST00000528396 ERP27Q96DN0 273 aa12.37□□□□□ -0.43
CAPN1-215ENST00000528396 MAGED4Q96JG8 741 aa12.37□□□□□ -0.43
CAPN1-215ENST00000528396 ZNF681Q96N22 645 aa12.37□□□□□ -0.43
CAPN1-215ENST00000528396 FRMD6Q96NE9 622 aa12.37□□□□□ -0.43
CAPN1-215ENST00000528396 TSSK3Q96PN8 268 aa12.37□□□□□ -0.43
CAPN1-215ENST00000528396 TUBB1Q9H4B7 451 aa12.37□□□□□ -0.43
CAPN1-215ENST00000528396 TMBIM4Q9HC24 238 aa12.37□□□□□ -0.43
CAPN1-215ENST00000528396 NPIPA1Q9UND3 350 aa12.37□□□□□ -0.43
CAPN1-215ENST00000528396 RAP2CQ9Y3L5 183 aa12.37□□□□□ -0.43
CAPN1-215ENST00000528396 CCL27Q9Y4X3 112 aa12.37□□□□□ -0.43
CAPN1-215ENST00000528396 PTPN13Q12923 2485 aa12.37□□□□□ -0.43
CAPN1-215ENST00000528396 CROCCQ5TZA2 2017 aa12.37□□□□□ -0.43
CAPN1-215ENST00000528396 SPENQ96T58 3664 aaKnown RBP12.36□□□□□ -0.43
CAPN1-215ENST00000528396 ATP6AP2A0A1C7CYW4 349 aa12.36□□□□□ -0.43
CAPN1-215ENST00000528396 NPIPB8E9PQR5 432 aa12.36□□□□□ -0.43
CAPN1-215ENST00000528396 G3V3Y1 287 aa12.36□□□□□ -0.43
CAPN1-215ENST00000528396 ATP6AP2O75787 350 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms