RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 SLC6A17Q9H1V8 727 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 DEC1Q9P2X7 70 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 TBC1D24Q9ULP9 559 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 PEX16Q9Y5Y5 336 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 CEP290O15078 2479 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 TAF4O00268 1085 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 MYL12BO14950 172 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 KIAA0355O15063 1070 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 MRPS14O60783 128 aaKnown RBP7.04□□□□□ -1.28
C11orf54-207ENST00000528288 NCR1O76036 304 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 TIMP1P01033 207 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 CHRM4P08173 479 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 SOX18P35713 384 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 MAGEA8P43361 318 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 SLC15A1P46059 708 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 KCNJ5P48544 419 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 KRT33BQ14525 404 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 HEPACAMQ14CZ8 416 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 LTB4RQ15722 352 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 WSCD2Q2TBF2 565 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 FAM214AQ32MH5 1076 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 TYW3Q6IPR3 259 aaKnown RBP7.04□□□□□ -1.28
C11orf54-207ENST00000528288 DCUN1D3Q8IWE4 304 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 NRSN1Q8IZ57 195 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 ZFPM2Q8WW38 1151 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 SLC35G5Q96KT7 338 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 TOX2Q96NM4 488 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 FAM83CQ9BQN1 747 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 CDCA4Q9BXL8 241 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 PRRG3Q9BZD7 231 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 DDX28Q9NUL7 540 aaKnown RBP7.04□□□□□ -1.28
C11orf54-207ENST00000528288 AHSPQ9NZD4 102 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 A4GNTQ9UNA3 340 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 ATG4BQ9Y4P1 393 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 KIAA1671Q9BY89 1806 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 IGKV1-8A0A0C4DH67 115 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 A0A1W2PPV9 198 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 MID1O15344 667 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 ERI3O43414 337 aaKnown RBP7.04□□□□□ -1.28
C11orf54-207ENST00000528288 TP53P04637 393 aaPredicted RBP7.04□□□□□ -1.28
C11orf54-207ENST00000528288 ITGB7P26010 798 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 CRYBB2P43320 205 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 AVPR1BP47901 424 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 CCR8P51685 355 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 OR2B6P58173 313 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 HNRNPA0Q13151 305 aaKnown RBP7.04□□□□□ -1.28
C11orf54-207ENST00000528288 CAMK1Q14012 370 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 E2F2Q14209 437 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 LCTLQ6UWM7 567 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 ERN2Q76MJ5 926 aaKnown RBP7.04□□□□□ -1.28
C11orf54-207ENST00000528288 VRK2Q86Y07 508 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 KLHDC8AQ8IYD2 350 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 SPPL3Q8TCT6 385 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 ASB15Q8WXK1 588 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 C1GALT1C1Q96EU7 318 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 ART5Q96L15 291 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 INSM2Q96T92 566 aaPredicted RBP7.04□□□□□ -1.28
C11orf54-207ENST00000528288 TP63Q9H3D4 680 aaPredicted RBP7.04□□□□□ -1.28
C11orf54-207ENST00000528288 SLC25A19Q9HC21 320 aa7.04□□□□□ -1.28
C11orf54-207ENST00000528288 HMGN2P05204 90 aaKnown RBP7.03□□□□□ -1.28
C11orf54-207ENST00000528288 CSTF2P33240 577 aaKnown RBP eCLIP7.03□□□□□ -1.282e-8■■■■□ 23.8
C11orf54-207ENST00000528288 BMPR1AP36894 532 aa7.03□□□□□ -1.28
C11orf54-207ENST00000528288 RPL3P39023 403 aaKnown RBP7.03□□□□□ -1.28
C11orf54-207ENST00000528288 PXNP49023 591 aaPredicted RBP7.03□□□□□ -1.28
C11orf54-207ENST00000528288 PCBP4P57723 403 aaKnown RBP7.03□□□□□ -1.28
C11orf54-207ENST00000528288 RPS25P62851 125 aaKnown RBP7.03□□□□□ -1.28
C11orf54-207ENST00000528288 OLR1P78380 273 aa7.03□□□□□ -1.28
C11orf54-207ENST00000528288 CDK3Q00526 305 aa7.03□□□□□ -1.28
C11orf54-207ENST00000528288 ZNF45Q02386 682 aa7.03□□□□□ -1.28
C11orf54-207ENST00000528288 PRKCDQ05655 676 aa7.03□□□□□ -1.28
C11orf54-207ENST00000528288 EIF4HQ15056 248 aaKnown RBP7.03□□□□□ -1.28
C11orf54-207ENST00000528288 MLF2Q15773 248 aaPredicted RBP7.03□□□□□ -1.28
C11orf54-207ENST00000528288 FAM78AQ5JUQ0 283 aa7.03□□□□□ -1.28
C11orf54-207ENST00000528288 CCDC190Q86UF4 302 aa7.03□□□□□ -1.28
C11orf54-207ENST00000528288 OR4N5Q8IXE1 308 aa7.03□□□□□ -1.28
C11orf54-207ENST00000528288 MINDY2Q8NBR6 621 aa7.03□□□□□ -1.28
C11orf54-207ENST00000528288 TMEM145Q8NBT3 493 aa7.03□□□□□ -1.28
C11orf54-207ENST00000528288 SLC35B4Q969S0 331 aa7.03□□□□□ -1.28
C11orf54-207ENST00000528288 ZNF354BQ96LW1 612 aa7.03□□□□□ -1.28
C11orf54-207ENST00000528288 NXF2Q9GZY0 626 aaKnown RBP7.03□□□□□ -1.28
C11orf54-207ENST00000528288 CCDC59Q9P031 241 aaKnown RBP7.03□□□□□ -1.28
C11orf54-207ENST00000528288 KCND3Q9UK17 655 aa7.03□□□□□ -1.28
C11orf54-207ENST00000528288 MAPRE3Q9UPY8 281 aa7.03□□□□□ -1.28
C11orf54-207ENST00000528288 INSL6Q9Y581 213 aa7.03□□□□□ -1.28
C11orf54-207ENST00000528288 GRXCR1A8MXD5 290 aa7.03□□□□□ -1.28
C11orf54-207ENST00000528288 DVL2O14641 736 aa7.03□□□□□ -1.28
C11orf54-207ENST00000528288 ADAP00813 363 aa7.03□□□□□ -1.28
C11orf54-207ENST00000528288 GNRH1P01148 92 aa7.03□□□□□ -1.28
C11orf54-207ENST00000528288 SLC35G4P0C7Q5 338 aa7.03□□□□□ -1.28
C11orf54-207ENST00000528288 FUT1P19526 365 aa7.03□□□□□ -1.28
C11orf54-207ENST00000528288 CERS1P27544 350 aa7.03□□□□□ -1.28
C11orf54-207ENST00000528288 CSNK1G2P78368 415 aa7.03□□□□□ -1.28
C11orf54-207ENST00000528288 ID2Q02363 134 aa7.03□□□□□ -1.28
C11orf54-207ENST00000528288 PCDH1Q08174 1060 aa7.03□□□□□ -1.28
C11orf54-207ENST00000528288 SLAMF1Q13291 335 aa7.03□□□□□ -1.28
C11orf54-207ENST00000528288 ILKQ13418 452 aa7.03□□□□□ -1.28
C11orf54-207ENST00000528288 ARMC4Q5T2S8 1044 aa7.03□□□□□ -1.28
C11orf54-207ENST00000528288 LRRTM4Q86VH4 590 aa7.03□□□□□ -1.28
C11orf54-207ENST00000528288 NUDT13Q86X67 352 aa7.03□□□□□ -1.28
C11orf54-207ENST00000528288 KIF18BQ86Y91 864 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms