RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 NPHS1O60500 1241 aa24.32■■□□□ 1.48
TSPAN4-217ENST00000527644 ZNF844Q08AG5 666 aa24.32■■□□□ 1.48
TSPAN4-217ENST00000527644 ZNF763Q0D2J5 394 aa24.32■■□□□ 1.48
TSPAN4-217ENST00000527644 KRT71Q3SY84 523 aa24.32■■□□□ 1.48
TSPAN4-217ENST00000527644 SLC22A10Q63ZE4 541 aa24.32■■□□□ 1.48
TSPAN4-217ENST00000527644 CLEC6AQ6EIG7 209 aa24.32■■□□□ 1.48
TSPAN4-217ENST00000527644 FAM111BQ6SJ93 734 aa24.32■■□□□ 1.48
TSPAN4-217ENST00000527644 Q6ZPB1 254 aaPredicted RBP24.32■■□□□ 1.48
TSPAN4-217ENST00000527644 RGS9BPQ6ZS82 235 aa24.32■■□□□ 1.48
TSPAN4-217ENST00000527644 GK5Q6ZS86 529 aa24.32■■□□□ 1.48
TSPAN4-217ENST00000527644 SH2D2AQ9NP31 389 aa24.32■■□□□ 1.48
TSPAN4-217ENST00000527644 EHD3Q9NZN3 535 aa24.32■■□□□ 1.48
TSPAN4-217ENST00000527644 ZNF639Q9UID6 485 aa24.32■■□□□ 1.48
TSPAN4-217ENST00000527644 WBP11Q9Y2W2 641 aaKnown RBP24.32■■□□□ 1.48
TSPAN4-217ENST00000527644 CCL27Q9Y4X3 112 aa24.32■■□□□ 1.48
TSPAN4-217ENST00000527644 PINLYPA6NC86 204 aa24.31■■□□□ 1.48
TSPAN4-217ENST00000527644 SLC28A1O00337 649 aa24.31■■□□□ 1.48
TSPAN4-217ENST00000527644 HS6ST1O60243 411 aa24.31■■□□□ 1.48
TSPAN4-217ENST00000527644 CCL3P10147 92 aa24.31■■□□□ 1.48
TSPAN4-217ENST00000527644 CREB1P16220 341 aa24.31■■□□□ 1.48
TSPAN4-217ENST00000527644 NR0B1P51843 470 aaKnown RBP24.31■■□□□ 1.48
TSPAN4-217ENST00000527644 PLGLB1Q02325 96 aa24.31■■□□□ 1.48
TSPAN4-217ENST00000527644 DUSP2Q05923 314 aa24.31■■□□□ 1.48
TSPAN4-217ENST00000527644 FAM180BQ6P0A1 224 aa24.31■■□□□ 1.48
TSPAN4-217ENST00000527644 RNF165Q6ZSG1 346 aa24.31■■□□□ 1.48
TSPAN4-217ENST00000527644 FAM47EQ6ZV65 393 aa24.31■■□□□ 1.48
TSPAN4-217ENST00000527644 C17orf47Q8NEP4 570 aa24.31■■□□□ 1.48
TSPAN4-217ENST00000527644 PAQR8Q8TEZ7 354 aa24.31■■□□□ 1.48
TSPAN4-217ENST00000527644 ADIPOR1Q96A54 375 aa24.31■■□□□ 1.48
TSPAN4-217ENST00000527644 CTHRC1Q96CG8 243 aa24.31■■□□□ 1.48
TSPAN4-217ENST00000527644 MECRQ9BV79 373 aa24.31■■□□□ 1.48
TSPAN4-217ENST00000527644 EML4Q9HC35 981 aaKnown RBP24.31■■□□□ 1.48
TSPAN4-217ENST00000527644 PFDN4Q9NQP4 134 aa24.31■■□□□ 1.48
TSPAN4-217ENST00000527644 GIMAP4Q9NUV9 329 aa24.31■■□□□ 1.48
TSPAN4-217ENST00000527644 A0A0G2JMM0 328 aa24.3■■□□□ 1.48
TSPAN4-217ENST00000527644 A0A1W2PPB8 328 aa24.3■■□□□ 1.48
TSPAN4-217ENST00000527644 A0A1W2PRS3 328 aa24.3■■□□□ 1.48
TSPAN4-217ENST00000527644 KIR3DP1A8MWS1 328 aa24.3■■□□□ 1.48
TSPAN4-217ENST00000527644 CAPN14A8MX76 684 aa24.3■■□□□ 1.48
TSPAN4-217ENST00000527644 NPIPB8E9PQR5 432 aa24.3■■□□□ 1.48
TSPAN4-217ENST00000527644 G3V3Y1 287 aa24.3■■□□□ 1.48
TSPAN4-217ENST00000527644 ACOT7O00154 380 aa24.3■■□□□ 1.48
TSPAN4-217ENST00000527644 CCL21O00585 134 aa24.3■■□□□ 1.48
TSPAN4-217ENST00000527644 RGS16O15492 202 aaPredicted RBP24.3■■□□□ 1.48
TSPAN4-217ENST00000527644 TYROBPO43914 113 aa24.3■■□□□ 1.48
TSPAN4-217ENST00000527644 CHEK2O96017 543 aa24.3■■□□□ 1.48
TSPAN4-217ENST00000527644 PRPH2P23942 346 aa24.3■■□□□ 1.48
TSPAN4-217ENST00000527644 PPIAP62937 165 aaKnown RBP24.3■■□□□ 1.48
TSPAN4-217ENST00000527644 CMPK2Q5EBM0 449 aa24.3■■□□□ 1.48
TSPAN4-217ENST00000527644 CCDC116Q8IYX3 515 aa24.3■■□□□ 1.48
TSPAN4-217ENST00000527644 ADCY4Q8NFM4 1077 aa24.3■■□□□ 1.48
TSPAN4-217ENST00000527644 EXOSC8Q96B26 276 aaKnown RBP24.3■■□□□ 1.48
TSPAN4-217ENST00000527644 SLC35C2Q9NQQ7 365 aa24.3■■□□□ 1.48
TSPAN4-217ENST00000527644 SUCOQ9UBS9 1254 aaKnown RBP24.3■■□□□ 1.48
TSPAN4-217ENST00000527644 BCAP29Q9UHQ4 241 aa24.3■■□□□ 1.48
TSPAN4-217ENST00000527644 MYO7BQ6PIF6 2116 aa24.29■■□□□ 1.48
TSPAN4-217ENST00000527644 CROCCQ5TZA2 2017 aa24.29■■□□□ 1.48
TSPAN4-217ENST00000527644 A1L4Q6 167 aa24.29■■□□□ 1.48
TSPAN4-217ENST00000527644 RGS14O43566 566 aa24.29■■□□□ 1.48
TSPAN4-217ENST00000527644 FGF4P08620 206 aa24.29■■□□□ 1.48
TSPAN4-217ENST00000527644 ABOP16442 354 aa24.29■■□□□ 1.48
TSPAN4-217ENST00000527644 DDCP20711 480 aa24.29■■□□□ 1.48
TSPAN4-217ENST00000527644 PTGER1P34995 402 aa24.29■■□□□ 1.48
TSPAN4-217ENST00000527644 NRG3P56975 720 aa24.29■■□□□ 1.48
TSPAN4-217ENST00000527644 HSF1Q00613 529 aa24.29■■□□□ 1.48
TSPAN4-217ENST00000527644 C2orf80Q0P641 193 aa24.29■■□□□ 1.48
TSPAN4-217ENST00000527644 C3AR1Q16581 482 aa24.29■■□□□ 1.48
TSPAN4-217ENST00000527644 NTRK2Q16620 822 aa24.29■■□□□ 1.48
TSPAN4-217ENST00000527644 ARL13AQ5H913 290 aaPredicted RBP24.29■■□□□ 1.48
TSPAN4-217ENST00000527644 KANK2Q63ZY3 851 aa24.29■■□□□ 1.48
TSPAN4-217ENST00000527644 NOXRED1Q6NXP6 359 aa24.29■■□□□ 1.48
TSPAN4-217ENST00000527644 MTFR2Q6P444 385 aa24.29■■□□□ 1.48
TSPAN4-217ENST00000527644 SLC22A16Q86VW1 577 aa24.29■■□□□ 1.48
TSPAN4-217ENST00000527644 CHERPQ8IWX8 916 aaKnown RBP24.29■■□□□ 1.48
TSPAN4-217ENST00000527644 OR52N2Q8NGI0 321 aa24.29■■□□□ 1.48
TSPAN4-217ENST00000527644 PUM2Q8TB72 1066 aaKnown RBP eCLIP24.29■■□□□ 1.48
TSPAN4-217ENST00000527644 ZNF675Q8TD23 568 aa24.29■■□□□ 1.48
TSPAN4-217ENST00000527644 TTTY12Q9BZ98 90 aa24.29■■□□□ 1.48
TSPAN4-217ENST00000527644 IL1RL2Q9HB29 575 aa24.29■■□□□ 1.48
TSPAN4-217ENST00000527644 MYNNQ9NPC7 610 aa24.29■■□□□ 1.48
TSPAN4-217ENST00000527644 CNIH4Q9P003 139 aa24.29■■□□□ 1.48
TSPAN4-217ENST00000527644 SH3BGRL2Q9UJC5 107 aa24.29■■□□□ 1.48
TSPAN4-217ENST00000527644 ENTPD4Q9Y227 616 aa24.29■■□□□ 1.48
TSPAN4-217ENST00000527644 POLR3HQ9Y535 204 aaPredicted RBP24.29■■□□□ 1.48
TSPAN4-217ENST00000527644 NPFFR2Q9Y5X5 522 aa24.29■■□□□ 1.48
TSPAN4-217ENST00000527644 ZG16O60844 167 aa24.28■■□□□ 1.48
TSPAN4-217ENST00000527644 SEC22BO75396 215 aa24.28■■□□□ 1.48
TSPAN4-217ENST00000527644 GLSO94925 669 aaPredicted RBP24.28■■□□□ 1.48
TSPAN4-217ENST00000527644 GPX3P22352 226 aa24.28■■□□□ 1.48
TSPAN4-217ENST00000527644 SOX18P35713 384 aa24.28■■□□□ 1.48
TSPAN4-217ENST00000527644 SERPINB5P36952 375 aa24.28■■□□□ 1.48
TSPAN4-217ENST00000527644 EXOSC7Q15024 291 aaKnown RBP24.28■■□□□ 1.48
TSPAN4-217ENST00000527644 KIAA0040Q15053 153 aa24.28■■□□□ 1.48
TSPAN4-217ENST00000527644 LTB4RQ15722 352 aa24.28■■□□□ 1.48
TSPAN4-217ENST00000527644 CEBPEQ15744 281 aa24.28■■□□□ 1.48
TSPAN4-217ENST00000527644 TRMT12Q53H54 448 aaKnown RBP24.28■■□□□ 1.48
TSPAN4-217ENST00000527644 FAM71E1Q6IPT2 247 aa24.28■■□□□ 1.48
TSPAN4-217ENST00000527644 MAMDC2Q7Z304 686 aaPredicted RBP24.28■■□□□ 1.48
TSPAN4-217ENST00000527644 FBXW8Q8N3Y1 598 aa24.28■■□□□ 1.48
TSPAN4-217ENST00000527644 FAM13CQ8NE31 585 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms