RNA–Protein interactions for RNA: ENST00000526308.2

PCDHB18P-202, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 3,197 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-202ENST00000526308 SOX18P35713 384 aa13.02□□□□□ -0.32
PCDHB18P-202ENST00000526308 TMEM115Q12893 351 aaPredicted RBP13.02□□□□□ -0.32
PCDHB18P-202ENST00000526308 OCLNQ16625 522 aa13.02□□□□□ -0.32
PCDHB18P-202ENST00000526308 B3GLCTQ6Y288 498 aa13.02□□□□□ -0.32
PCDHB18P-202ENST00000526308 TMC8Q8IU68 726 aa13.02□□□□□ -0.32
PCDHB18P-202ENST00000526308 FAM181AQ8N9Y4 354 aa13.02□□□□□ -0.32
PCDHB18P-202ENST00000526308 OR4D11Q8NGI4 311 aa13.02□□□□□ -0.32
PCDHB18P-202ENST00000526308 NEIL3Q8TAT5 605 aa13.02□□□□□ -0.32
PCDHB18P-202ENST00000526308 ECHDC3Q96DC8 303 aa13.02□□□□□ -0.32
PCDHB18P-202ENST00000526308 MRPL9Q9BYD2 267 aaKnown RBP13.02□□□□□ -0.32
PCDHB18P-202ENST00000526308 EGLN3Q9H6Z9 239 aa13.02□□□□□ -0.32
PCDHB18P-202ENST00000526308 KCNK12Q9HB15 430 aa13.02□□□□□ -0.32
PCDHB18P-202ENST00000526308 B3GAT2Q9NPZ5 323 aa13.02□□□□□ -0.32
PCDHB18P-202ENST00000526308 MANSC4A6NHS7 340 aaPredicted RBP13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 CD8B2A6NJW9 211 aa13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 BTN3A3O00478 584 aa13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 PITPNM1O00562 1244 aa13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 PROM1O43490 865 aa13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 LATS1O95835 1130 aa13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 CD8BP10966 210 aa13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 HLA-FP30511 346 aa13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 EVI2BP34910 448 aa13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 SMSP52788 366 aa13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 RRAS2P62070 204 aaPredicted RBP13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 MLLT1Q03111 559 aaPredicted RBP13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 MAP4K2Q12851 820 aa13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 LRRC32Q14392 662 aa13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 ZNF628Q5EBL2 1059 aa13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 UNC5DQ6UXZ4 953 aa13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 FIBINQ8TAL6 211 aa13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 TEX47Q8TBZ9 253 aa13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 TMEM169Q96HH4 297 aa13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 ART5Q96L15 291 aa13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 ZNF354BQ96LW1 612 aa13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 NIPAL2Q9H841 368 aa13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 ZNF222Q9UK12 451 aa13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 SPEF1Q9Y4P9 236 aa13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 MYO9BQ13459 2157 aa13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 CKAP5Q14008 2032 aa13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 PDPK1O15530 556 aa13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 SERPIND1P05546 499 aa13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 OR12D1P0DN82 309 aa13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 MMP11P24347 488 aa13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 OPRD1P41143 372 aa13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 MTNR1AP48039 350 aa13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 PNLIPRP1P54315 467 aa13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 PDE7AQ13946 482 aa13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 INSL4Q14641 139 aa13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 SYPL1Q16563 259 aa13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 BRAT1Q6PJG6 821 aa13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 RRM2BQ7LG56 351 aa13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 TMEM150AQ86TG1 271 aa13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 IFNL1Q8IU54 200 aa13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 FAM26EQ8N5C1 309 aa13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 OR5D16Q8NGK9 328 aa13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 HCAR2Q8TDS4 363 aa13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 SLC5A11Q8WWX8 675 aa13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 MRPS31Q92665 395 aaKnown RBP13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 KIAA1143Q96AT1 154 aaPredicted RBP13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 SMAD5Q99717 465 aaKnown RBP13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 YIPF4Q9BSR8 244 aa13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 POLDIP3Q9BY77 421 aaKnown RBP13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 MRPL17Q9NRX2 175 aaKnown RBP13.02□□□□□ -0.33
PCDHB18P-202ENST00000526308 CD79BP40259 229 aa13.01□□□□□ -0.33
PCDHB18P-202ENST00000526308 FLYWCH1Q4VC44 716 aa13.01□□□□□ -0.33
PCDHB18P-202ENST00000526308 KIAA1161Q6NSJ0 714 aa13.01□□□□□ -0.33
PCDHB18P-202ENST00000526308 MZT2AQ6P582 158 aa13.01□□□□□ -0.33
PCDHB18P-202ENST00000526308 Q6ZNB5 142 aa13.01□□□□□ -0.33
PCDHB18P-202ENST00000526308 ZNF767PQ75MW2 155 aa13.01□□□□□ -0.33
PCDHB18P-202ENST00000526308 ZER1Q7Z7L7 766 aa13.01□□□□□ -0.33
PCDHB18P-202ENST00000526308 AKAP1Q92667 903 aaKnown RBP eCLIP13.01□□□□□ -0.33
PCDHB18P-202ENST00000526308 TIFAQ96CG3 184 aa13.01□□□□□ -0.33
PCDHB18P-202ENST00000526308 AP2M1Q96CW1 435 aa13.01□□□□□ -0.33
PCDHB18P-202ENST00000526308 IL17FQ96PD4 163 aa13.01□□□□□ -0.33
PCDHB18P-202ENST00000526308 PLAGL1Q9UM63 463 aa13.01□□□□□ -0.33
PCDHB18P-202ENST00000526308 A0A1B0GVC2 190 aa13.01□□□□□ -0.33
PCDHB18P-202ENST00000526308 A6NIN4 97 aa13.01□□□□□ -0.33
PCDHB18P-202ENST00000526308 RFXAPO00287 272 aa13.01□□□□□ -0.33
PCDHB18P-202ENST00000526308 FOXE1O00358 373 aaPredicted RBP13.01□□□□□ -0.33
PCDHB18P-202ENST00000526308 QSOX1O00391 747 aa13.01□□□□□ -0.33
PCDHB18P-202ENST00000526308 GREM1O60565 184 aa13.01□□□□□ -0.33
PCDHB18P-202ENST00000526308 PTGER1P34995 402 aa13.01□□□□□ -0.33
PCDHB18P-202ENST00000526308 IDNKQ5T6J7 187 aa13.01□□□□□ -0.33
PCDHB18P-202ENST00000526308 CCSAPQ6IQ19 270 aaPredicted RBP13.01□□□□□ -0.33
PCDHB18P-202ENST00000526308 QSOX2Q6ZRP7 698 aa13.01□□□□□ -0.33
PCDHB18P-202ENST00000526308 KRT74Q7RTS7 529 aa13.01□□□□□ -0.33
PCDHB18P-202ENST00000526308 OR8H3Q8N146 312 aa13.01□□□□□ -0.33
PCDHB18P-202ENST00000526308 MAP6Q96JE9 813 aa13.01□□□□□ -0.33
PCDHB18P-202ENST00000526308 TREX2Q9BQ50 279 aaPredicted RBP13.01□□□□□ -0.33
PCDHB18P-202ENST00000526308 STARD7Q9NQZ5 370 aa13.01□□□□□ -0.33
PCDHB18P-202ENST00000526308 SLC23A1Q9UHI7 598 aa13.01□□□□□ -0.33
PCDHB18P-202ENST00000526308 FBXW2Q9UKT8 454 aa13.01□□□□□ -0.33
PCDHB18P-202ENST00000526308 SLC9A8Q9Y2E8 581 aa13.01□□□□□ -0.33
PCDHB18P-202ENST00000526308 A0A0G2JN53 185 aa13□□□□□ -0.33
PCDHB18P-202ENST00000526308 NEDD8-MDP1E9PL57 170 aa13□□□□□ -0.33
PCDHB18P-202ENST00000526308 MMP20O60882 483 aa13□□□□□ -0.33
PCDHB18P-202ENST00000526308 C1orf105O95561 183 aa13□□□□□ -0.33
PCDHB18P-202ENST00000526308 PPP2R1BP30154 601 aa13□□□□□ -0.33
PCDHB18P-202ENST00000526308 GABRA5P31644 462 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms