RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 SEPT10Q9P0V9 454 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 LNPEPQ9UIQ6 1025 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 CFAP45Q9UL16 551 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 PHLPP2Q6ZVD8 1323 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 ADGRA3Q8IWK6 1321 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 RALGAPA2Q2PPJ7 1873 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 NLRC5Q86WI3 1866 aa3.32□□□□□ -1.88
CD44-219ENST00000525685 MKI67P46013 3256 aaKnown RBP3.32□□□□□ -1.88
CD44-219ENST00000525685 ATG2AQ2TAZ0 1938 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 A0A087X002 238 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 C5orf52A6NGY3 159 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 CCDC169A6NNP5 214 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 C2CD4DB7Z1M9 353 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 H3BMM5 538 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 PGRMC2O15173 223 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 CTDSPLO15194 276 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 ST8SIA3O43173 380 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 B4GALT5O43286 388 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 SELENOFO60613 162 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 RAD51DO75771 328 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 ERLIN2O94905 339 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 ARF4P18085 180 aaPredicted RBP3.31□□□□□ -1.88
CD44-219ENST00000525685 SSR1P43307 286 aaKnown RBP3.31□□□□□ -1.88
CD44-219ENST00000525685 NAMPTP43490 491 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 KCNJ1P48048 391 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 ZNF131P52739 623 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 PEX3P56589 373 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 ROR1Q01973 937 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 GIT2Q14161 759 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 MXD4Q14582 209 aaPredicted RBP3.31□□□□□ -1.88
CD44-219ENST00000525685 TAB1Q15750 504 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 DUSP5Q16690 384 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 FASTKD1Q53R41 847 aaKnown RBP3.31□□□□□ -1.88
CD44-219ENST00000525685 ATP1A1-AS1Q5TC04 95 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 ZC2HC1BQ5TFG8 222 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 TAF3Q5VWG9 929 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 RESP18Q5W5W9 173 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 BTNL8Q6UX41 500 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 CCDC73Q6ZRK6 1079 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 IL17RELQ6ZVW7 336 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 Q7L0L9 218 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 CATSPER4Q7RTX7 472 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 GLRX5Q86SX6 157 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 ANKRD46Q86W74 232 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 CDR2LQ86X02 465 aaPredicted RBP3.31□□□□□ -1.88
CD44-219ENST00000525685 MEX3DQ86XN8 651 aaKnown RBP3.31□□□□□ -1.88
CD44-219ENST00000525685 ZBTB8OSQ8IWT0 167 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 UXS1Q8NBZ7 420 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 KIFAP3Q92845 792 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 TOP1MTQ969P6 601 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 ZNF689Q96CS4 500 aaPredicted RBP3.31□□□□□ -1.88
CD44-219ENST00000525685 SGF29Q96ES7 293 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 CPB2Q96IY4 423 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 RBM41Q96IZ5 413 aaKnown RBP3.31□□□□□ -1.88
CD44-219ENST00000525685 POM121L2Q96KW2 1035 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 IFT74Q96LB3 600 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 C2orf48Q96LS8 159 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 GUCD1Q96NT3 240 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 TSSK2Q96PF2 358 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 TIPINQ9BVW5 301 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 FGFBP2Q9BYJ0 223 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 HOXD1Q9GZZ0 328 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 GFRA4Q9GZZ7 299 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 C2orf40Q9H1Z8 148 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 TNMDQ9H2S6 317 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 MED20Q9H944 212 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 LMAN1LQ9HAT1 526 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 RGS18Q9NS28 235 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.31□□□□□ -1.88
CD44-219ENST00000525685 CHMP5Q9NZZ3 219 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 BAIAP2L1Q9UHR4 511 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 ODF2LQ9ULJ1 636 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 PIN4Q9Y237 131 aaKnown RBP3.31□□□□□ -1.88
CD44-219ENST00000525685 ATP6V1DQ9Y5K8 247 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 TCHHQ07283 1943 aa3.31□□□□□ -1.88
CD44-219ENST00000525685 IQCMA0A1B0GVH7 501 aa3.3□□□□□ -1.88
CD44-219ENST00000525685 A0A1B0GVL5 298 aa3.3□□□□□ -1.88
CD44-219ENST00000525685 FAM170AA1A519 330 aa3.3□□□□□ -1.88
CD44-219ENST00000525685 OOEPA6NGQ2 149 aa3.3□□□□□ -1.88
CD44-219ENST00000525685 EPOPA6NHQ4 379 aa3.3□□□□□ -1.88
CD44-219ENST00000525685 SURF4O15260 269 aa3.3□□□□□ -1.88
CD44-219ENST00000525685 SLC16A4O15374 487 aa3.3□□□□□ -1.88
CD44-219ENST00000525685 POLR2DO15514 142 aaKnown RBP3.3□□□□□ -1.88
CD44-219ENST00000525685 KIF5CO60282 957 aa3.3□□□□□ -1.88
CD44-219ENST00000525685 SIX3O95343 332 aaPredicted RBP3.3□□□□□ -1.88
CD44-219ENST00000525685 GLULP15104 373 aa3.3□□□□□ -1.88
CD44-219ENST00000525685 CYP2A7P20853 494 aa3.3□□□□□ -1.88
CD44-219ENST00000525685 CMA1P23946 247 aa3.3□□□□□ -1.88
CD44-219ENST00000525685 CTNNA2P26232 953 aa3.3□□□□□ -1.88
CD44-219ENST00000525685 CASP1P29466 404 aa3.3□□□□□ -1.88
CD44-219ENST00000525685 RBMS1P29558 406 aaKnown RBP3.3□□□□□ -1.88
CD44-219ENST00000525685 NMT1P30419 496 aaKnown RBP3.3□□□□□ -1.88
CD44-219ENST00000525685 AXLP30530 894 aa3.3□□□□□ -1.88
CD44-219ENST00000525685 SLC1A3P43003 542 aa3.3□□□□□ -1.88
CD44-219ENST00000525685 OR3A3P47888 321 aa3.3□□□□□ -1.88
CD44-219ENST00000525685 CSNK2BP67870 215 aa3.3□□□□□ -1.88
CD44-219ENST00000525685 POU5F1Q01860 360 aaKnown RBP3.3□□□□□ -1.88
CD44-219ENST00000525685 YWHAHQ04917 246 aaPredicted RBP3.3□□□□□ -1.88
CD44-219ENST00000525685 BTG3Q14201 252 aaPredicted RBP3.3□□□□□ -1.88
CD44-219ENST00000525685 PPA1Q15181 289 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms