RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 GRTP1Q5TC63 336 aa21.9■■□□□ 1.1
USP47-205ENST00000525257 C3orf62Q6ZUJ4 267 aa21.9■■□□□ 1.1
USP47-205ENST00000525257 PPM1NQ8N819 430 aa21.9■■□□□ 1.1
USP47-205ENST00000525257 TP53INP1Q96A56 240 aa21.9■■□□□ 1.1
USP47-205ENST00000525257 DOCK7Q96N67 2140 aa21.9■■□□□ 1.1
USP47-205ENST00000525257 DDX31Q9H8H2 851 aaKnown RBP21.9■■□□□ 1.1
USP47-205ENST00000525257 CXorf21Q9HAI6 301 aa21.9■■□□□ 1.1
USP47-205ENST00000525257 TSC22D4Q9Y3Q8 395 aa21.9■■□□□ 1.1
USP47-205ENST00000525257 IKBKGQ9Y6K9 419 aa21.9■■□□□ 1.1
USP47-205ENST00000525257 DNHD1Q96M86 4753 aa21.9■■□□□ 1.1
USP47-205ENST00000525257 CD8B2A6NJW9 211 aa21.89■■□□□ 1.09
USP47-205ENST00000525257 CT62P0C5K7 136 aa21.89■■□□□ 1.09
USP47-205ENST00000525257 MTHFD2P13995 350 aa21.89■■□□□ 1.09
USP47-205ENST00000525257 BMP7P18075 431 aa21.89■■□□□ 1.09
USP47-205ENST00000525257 CTSSP25774 331 aa21.89■■□□□ 1.09
USP47-205ENST00000525257 TMED10P49755 219 aaKnown RBP21.89■■□□□ 1.09
USP47-205ENST00000525257 GPX6P59796 221 aa21.89■■□□□ 1.09
USP47-205ENST00000525257 WIPI1Q5MNZ9 446 aaPredicted RBP21.89■■□□□ 1.09
USP47-205ENST00000525257 LIPJQ5W064 366 aa21.89■■□□□ 1.09
USP47-205ENST00000525257 OR52E8Q6IFG1 317 aa21.89■■□□□ 1.09
USP47-205ENST00000525257 GALNT12Q8IXK2 581 aa21.89■■□□□ 1.09
USP47-205ENST00000525257 NXNL1Q96CM4 212 aa21.89■■□□□ 1.09
USP47-205ENST00000525257 WDYHV1Q96HA8 205 aa21.89■■□□□ 1.09
USP47-205ENST00000525257 SAR1BQ9Y6B6 198 aa21.89■■□□□ 1.09
USP47-205ENST00000525257 NSD1Q96L73 2696 aaPredicted RBP21.89■■□□□ 1.09
USP47-205ENST00000525257 MBD3L4A6NDZ8 208 aaPredicted RBP21.88■■□□□ 1.09
USP47-205ENST00000525257 MBD3L3A6NE82 208 aaPredicted RBP21.88■■□□□ 1.09
USP47-205ENST00000525257 LRRC14BA6NHZ5 514 aa21.88■■□□□ 1.09
USP47-205ENST00000525257 MBD3L5A6NJ08 208 aaPredicted RBP21.88■■□□□ 1.09
USP47-205ENST00000525257 GNB5O14775 395 aa21.88■■□□□ 1.09
USP47-205ENST00000525257 PGRMC2O15173 223 aa21.88■■□□□ 1.09
USP47-205ENST00000525257 EIF3HO15372 352 aaKnown RBP eCLIP21.88■■□□□ 1.09
USP47-205ENST00000525257 CASP3P42574 277 aa21.88■■□□□ 1.09
USP47-205ENST00000525257 PAFAH1B1P43034 410 aa21.88■■□□□ 1.09
USP47-205ENST00000525257 NRG3P56975 720 aa21.88■■□□□ 1.09
USP47-205ENST00000525257 SORDQ00796 357 aa21.88■■□□□ 1.09
USP47-205ENST00000525257 CALCOCO2Q13137 446 aa21.88■■□□□ 1.09
USP47-205ENST00000525257 CPSF6Q16630 551 aaKnown RBP eCLIP21.88■■□□□ 1.09
USP47-205ENST00000525257 KBTBD12Q3ZCT8 623 aa21.88■■□□□ 1.09
USP47-205ENST00000525257 NHSL2Q5HYW2 709 aa21.88■■□□□ 1.09
USP47-205ENST00000525257 CYS1Q717R9 158 aa21.88■■□□□ 1.09
USP47-205ENST00000525257 Q71RC1 249 aaPredicted RBP21.88■■□□□ 1.09
USP47-205ENST00000525257 NUDT13Q86X67 352 aa21.88■■□□□ 1.09
USP47-205ENST00000525257 MBD3L2Q8NHZ7 208 aaPredicted RBP21.88■■□□□ 1.09
USP47-205ENST00000525257 ABTB1Q969K4 478 aaPredicted RBP21.88■■□□□ 1.09
USP47-205ENST00000525257 REPS1Q96D71 796 aa21.88■■□□□ 1.09
USP47-205ENST00000525257 SECISBP2Q96T21 854 aaKnown RBP21.88■■□□□ 1.09
USP47-205ENST00000525257 SMR3AQ99954 134 aa21.88■■□□□ 1.09
USP47-205ENST00000525257 YIPF4Q9BSR8 244 aa21.88■■□□□ 1.09
USP47-205ENST00000525257 PLEKHF2Q9H8W4 249 aa21.88■■□□□ 1.09
USP47-205ENST00000525257 MED12Q93074 2177 aa21.87■■□□□ 1.09
USP47-205ENST00000525257 CLCA1A8K7I4 914 aa21.87■■□□□ 1.09
USP47-205ENST00000525257 H0YIV9 168 aa21.87■■□□□ 1.09
USP47-205ENST00000525257 PIK3R1P27986 724 aa21.87■■□□□ 1.09
USP47-205ENST00000525257 CRABP2P29373 138 aa21.87■■□□□ 1.09
USP47-205ENST00000525257 OPRM1P35372 400 aa21.87■■□□□ 1.09
USP47-205ENST00000525257 NEK2P51955 445 aa21.87■■□□□ 1.09
USP47-205ENST00000525257 GNG11P61952 73 aa21.87■■□□□ 1.09
USP47-205ENST00000525257 RPP38P78345 283 aaKnown RBP21.87■■□□□ 1.09
USP47-205ENST00000525257 CUL3Q13618 768 aa21.87■■□□□ 1.09
USP47-205ENST00000525257 SETDB1Q15047 1291 aa21.87■■□□□ 1.09
USP47-205ENST00000525257 POU4F3Q15319 338 aa21.87■■□□□ 1.09
USP47-205ENST00000525257 PFKFB4Q16877 469 aa21.87■■□□□ 1.09
USP47-205ENST00000525257 ZNF615Q8N8J6 731 aa21.87■■□□□ 1.09
USP47-205ENST00000525257 C9orf106Q8NAJ2 232 aa21.87■■□□□ 1.09
USP47-205ENST00000525257 KCTD4Q8WVF5 259 aa21.87■■□□□ 1.09
USP47-205ENST00000525257 ADIPOR1Q96A54 375 aa21.87■■□□□ 1.09
USP47-205ENST00000525257 OR10A5Q9H207 317 aa21.87■■□□□ 1.09
USP47-205ENST00000525257 SYCE1LA8MT33 242 aa21.86■■□□□ 1.09
USP47-205ENST00000525257 GFAPP14136 432 aa21.86■■□□□ 1.09
USP47-205ENST00000525257 KRT15P19012 456 aa21.86■■□□□ 1.09
USP47-205ENST00000525257 PIK3CGP48736 1102 aa21.86■■□□□ 1.09
USP47-205ENST00000525257 NAGLUP54802 743 aa21.86■■□□□ 1.09
USP47-205ENST00000525257 IRF9Q00978 393 aa21.86■■□□□ 1.09
USP47-205ENST00000525257 LTBQ06643 244 aa21.86■■□□□ 1.09
USP47-205ENST00000525257 FUT7Q11130 342 aa21.86■■□□□ 1.09
USP47-205ENST00000525257 YRDCQ86U90 279 aaKnown RBP21.86■■□□□ 1.09
USP47-205ENST00000525257 BIVMQ86UB2 503 aa21.86■■□□□ 1.09
USP47-205ENST00000525257 CENPLQ8N0S6 344 aaPredicted RBP21.86■■□□□ 1.09
USP47-205ENST00000525257 FAM83FQ8NEG4 500 aaPredicted RBP21.86■■□□□ 1.09
USP47-205ENST00000525257 TMEM41AQ96HV5 264 aa21.86■■□□□ 1.09
USP47-205ENST00000525257 NAPGQ99747 312 aaPredicted RBP21.86■■□□□ 1.09
USP47-205ENST00000525257 KCNF1Q9H3M0 494 aa21.86■■□□□ 1.09
USP47-205ENST00000525257 CALHM2Q9HA72 323 aa21.86■■□□□ 1.09
USP47-205ENST00000525257 JKAMPQ9P055 326 aa21.86■■□□□ 1.09
USP47-205ENST00000525257 WHRNQ9P202 907 aa21.86■■□□□ 1.09
USP47-205ENST00000525257 RNF11Q9Y3C5 154 aa21.86■■□□□ 1.09
USP47-205ENST00000525257 GSTA2P09210 222 aa21.85■■□□□ 1.09
USP47-205ENST00000525257 TMIGD3P0DMS9 266 aaPredicted RBP21.85■■□□□ 1.09
USP47-205ENST00000525257 ABCD3P28288 659 aa21.85■■□□□ 1.09
USP47-205ENST00000525257 PTPN6P29350 595 aa21.85■■□□□ 1.09
USP47-205ENST00000525257 SOX18P35713 384 aa21.85■■□□□ 1.09
USP47-205ENST00000525257 DCAF7P61962 342 aa21.85■■□□□ 1.09
USP47-205ENST00000525257 RCAN2Q14206 197 aa21.85■■□□□ 1.09
USP47-205ENST00000525257 NNATQ16517 81 aa21.85■■□□□ 1.09
USP47-205ENST00000525257 C6orf163Q5TEZ5 329 aa21.85■■□□□ 1.09
USP47-205ENST00000525257 TIGD3Q6B0B8 471 aa21.85■■□□□ 1.09
USP47-205ENST00000525257 ANGPTL8Q6UXH0 198 aa21.85■■□□□ 1.09
USP47-205ENST00000525257 GOLGA7Q7Z5G4 137 aa21.85■■□□□ 1.09
USP47-205ENST00000525257 OR1J4Q8NGS1 313 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms