RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 FASLGP48023 281 aa14.36□□□□□ -0.11
BEST1-204ENST00000524926 KCNJ5P48544 419 aa14.36□□□□□ -0.11
BEST1-204ENST00000524926 CSNK1EP49674 416 aaKnown RBP14.36□□□□□ -0.11
BEST1-204ENST00000524926 ESRRGP62508 458 aa14.36□□□□□ -0.11
BEST1-204ENST00000524926 ID2Q02363 134 aa14.36□□□□□ -0.11
BEST1-204ENST00000524926 MICAQ29983 383 aa14.36□□□□□ -0.11
BEST1-204ENST00000524926 C6orf132Q5T0Z8 1188 aa14.36□□□□□ -0.11
BEST1-204ENST00000524926 HMGN2P46Q86SG4 172 aa14.36□□□□□ -0.11
BEST1-204ENST00000524926 SHISA5Q8N114 240 aa14.36□□□□□ -0.11
BEST1-204ENST00000524926 LGI4Q8N135 537 aa14.36□□□□□ -0.11
BEST1-204ENST00000524926 C19orf47Q8N9M1 422 aaKnown RBP14.36□□□□□ -0.11
BEST1-204ENST00000524926 SETD9Q8NE22 299 aa14.36□□□□□ -0.11
BEST1-204ENST00000524926 OR4C15Q8NGM1 316 aa14.36□□□□□ -0.11
BEST1-204ENST00000524926 PHF10Q8WUB8 498 aaKnown RBP14.36□□□□□ -0.11
BEST1-204ENST00000524926 HDAC2Q92769 488 aaKnown RBP14.36□□□□□ -0.11
BEST1-204ENST00000524926 NMD3Q96D46 503 aaKnown RBP14.36□□□□□ -0.11
BEST1-204ENST00000524926 ZNF354BQ96LW1 612 aa14.36□□□□□ -0.11
BEST1-204ENST00000524926 OR7D2Q96RA2 312 aa14.36□□□□□ -0.11
BEST1-204ENST00000524926 LYRM4Q9HD34 91 aa14.36□□□□□ -0.11
BEST1-204ENST00000524926 KCNE3Q9Y6H6 103 aa14.36□□□□□ -0.11
BEST1-204ENST00000524926 SDK1Q7Z5N4 2213 aa14.36□□□□□ -0.11
BEST1-204ENST00000524926 TRIM64CA6NLI5 447 aa14.36□□□□□ -0.11
BEST1-204ENST00000524926 PCDH17O14917 1159 aa14.36□□□□□ -0.11
BEST1-204ENST00000524926 AQP9O43315 295 aa14.36□□□□□ -0.11
BEST1-204ENST00000524926 LDB3O75112 727 aa14.36□□□□□ -0.11
BEST1-204ENST00000524926 CTSBP07858 339 aa14.36□□□□□ -0.11
BEST1-204ENST00000524926 CHRM4P08173 479 aa14.36□□□□□ -0.11
BEST1-204ENST00000524926 BCKDHBP21953 392 aa14.36□□□□□ -0.11
BEST1-204ENST00000524926 FUT4P22083 530 aa14.36□□□□□ -0.11
BEST1-204ENST00000524926 CRHBPP24387 322 aa14.36□□□□□ -0.11
BEST1-204ENST00000524926 GSTT1P30711 240 aa14.36□□□□□ -0.11
BEST1-204ENST00000524926 RYKP34925 604 aa14.36□□□□□ -0.11
BEST1-204ENST00000524926 PEX19P40855 299 aa14.36□□□□□ -0.11
BEST1-204ENST00000524926 CXCL12P48061 93 aa14.36□□□□□ -0.11
BEST1-204ENST00000524926 HNRNPKP61978 463 aaKnown RBP eCLIP14.36□□□□□ -0.11
BEST1-204ENST00000524926 ZP2Q05996 745 aa14.36□□□□□ -0.11
BEST1-204ENST00000524926 NPRL3Q12980 569 aa14.36□□□□□ -0.11
BEST1-204ENST00000524926 GNA13Q14344 377 aa14.36□□□□□ -0.11
BEST1-204ENST00000524926 FAM92BQ6ZTR7 304 aa14.36□□□□□ -0.11
BEST1-204ENST00000524926 AVL9Q8NBF6 648 aa14.36□□□□□ -0.11
BEST1-204ENST00000524926 CNIH3Q8TBE1 160 aa14.36□□□□□ -0.11
BEST1-204ENST00000524926 GUCD1Q96NT3 240 aa14.36□□□□□ -0.11
BEST1-204ENST00000524926 PRDM6Q9NQX0 595 aa14.36□□□□□ -0.11
BEST1-204ENST00000524926 RLIMQ9NVW2 624 aa14.36□□□□□ -0.11
BEST1-204ENST00000524926 GPC6Q9Y625 555 aaPredicted RBP14.36□□□□□ -0.11
BEST1-204ENST00000524926 SGK494L7N484 410 aa14.35□□□□□ -0.11
BEST1-204ENST00000524926 GALR3O60755 368 aaPredicted RBP14.35□□□□□ -0.11
BEST1-204ENST00000524926 PROS1P07225 676 aa14.35□□□□□ -0.11
BEST1-204ENST00000524926 SHC2P98077 582 aa14.35□□□□□ -0.11
BEST1-204ENST00000524926 FUT5Q11128 374 aa14.35□□□□□ -0.11
BEST1-204ENST00000524926 KEAP1Q14145 624 aa14.35□□□□□ -0.11
BEST1-204ENST00000524926 DEF8Q6ZN54 512 aa14.35□□□□□ -0.11
BEST1-204ENST00000524926 WDR53Q7Z5U6 358 aaPredicted RBP14.35□□□□□ -0.11
BEST1-204ENST00000524926 TAGAPQ8N103 731 aa14.35□□□□□ -0.11
BEST1-204ENST00000524926 OR7G2Q8NG99 324 aa14.35□□□□□ -0.11
BEST1-204ENST00000524926 BBS10Q8TAM1 723 aa14.35□□□□□ -0.11
BEST1-204ENST00000524926 MIPOL1Q8TD10 442 aa14.35□□□□□ -0.11
BEST1-204ENST00000524926 MAP3K3Q99759 626 aa14.35□□□□□ -0.11
BEST1-204ENST00000524926 APOL4Q9BPW4 351 aa14.35□□□□□ -0.11
BEST1-204ENST00000524926 RBM38Q9H0Z9 239 aaKnown RBP14.35□□□□□ -0.11
BEST1-204ENST00000524926 SPAG17Q6Q759 2223 aa14.35□□□□□ -0.11
BEST1-204ENST00000524926 ANXA8P13928 327 aa14.35□□□□□ -0.11
BEST1-204ENST00000524926 PORP16435 677 aaPredicted RBP14.35□□□□□ -0.11
BEST1-204ENST00000524926 RPS6KA3P51812 740 aa14.35□□□□□ -0.11
BEST1-204ENST00000524926 NXPH1P58417 271 aa14.35□□□□□ -0.11
BEST1-204ENST00000524926 RPP38P78345 283 aaKnown RBP14.35□□□□□ -0.11
BEST1-204ENST00000524926 CDK5R2Q13319 367 aa14.35□□□□□ -0.11
BEST1-204ENST00000524926 FAM111BQ6SJ93 734 aa14.35□□□□□ -0.11
BEST1-204ENST00000524926 SLC36A4Q6YBV0 504 aa14.35□□□□□ -0.11
BEST1-204ENST00000524926 KCTD8Q6ZWB6 473 aa14.35□□□□□ -0.11
BEST1-204ENST00000524926 USP53Q70EK8 1073 aa14.35□□□□□ -0.11
BEST1-204ENST00000524926 GPR141Q7Z602 305 aa14.35□□□□□ -0.11
BEST1-204ENST00000524926 ZNF605Q86T29 641 aa14.35□□□□□ -0.11
BEST1-204ENST00000524926 RBM45Q8IUH3 476 aaKnown RBP14.35□□□□□ -0.11
BEST1-204ENST00000524926 MCATQ8IVS2 390 aaKnown RBP14.35□□□□□ -0.11
BEST1-204ENST00000524926 BPIFB6Q8NFQ5 453 aa14.35□□□□□ -0.11
BEST1-204ENST00000524926 OR9Q2Q8NGE9 314 aa14.35□□□□□ -0.11
BEST1-204ENST00000524926 ADAMTS16Q8TE57 1224 aa14.35□□□□□ -0.11
BEST1-204ENST00000524926 DOK4Q8TEW6 326 aa14.35□□□□□ -0.11
BEST1-204ENST00000524926 APOBEC4Q8WW27 367 aaKnown RBP14.35□□□□□ -0.11
BEST1-204ENST00000524926 CLDN23Q96B33 292 aa14.35□□□□□ -0.11
BEST1-204ENST00000524926 SPATA5L1Q9BVQ7 753 aa14.35□□□□□ -0.11
BEST1-204ENST00000524926 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.35□□□□□ -0.11
BEST1-204ENST00000524926 PAPOLBQ9NRJ5 636 aaKnown RBP14.35□□□□□ -0.11
BEST1-204ENST00000524926 BLOC1S6Q9UL45 172 aa14.35□□□□□ -0.11
BEST1-204ENST00000524926 SIT1Q9Y3P8 196 aa14.35□□□□□ -0.11
BEST1-204ENST00000524926 LAMA1P25391 3075 aa14.35□□□□□ -0.11
BEST1-204ENST00000524926 FAM227AF5H4B4 570 aa14.34□□□□□ -0.11
BEST1-204ENST00000524926 CCNB2O95067 398 aa14.34□□□□□ -0.11
BEST1-204ENST00000524926 CPMP14384 443 aa14.34□□□□□ -0.11
BEST1-204ENST00000524926 POU2F1P14859 743 aa14.34□□□□□ -0.11
BEST1-204ENST00000524926 CAPZBP47756 277 aa14.34□□□□□ -0.11
BEST1-204ENST00000524926 HMGA2P52926 109 aa14.34□□□□□ -0.11
BEST1-204ENST00000524926 COLEC12Q5KU26 742 aa14.34□□□□□ -0.11
BEST1-204ENST00000524926 TCTN3Q6NUS6 607 aa14.34□□□□□ -0.11
BEST1-204ENST00000524926 ADAMTS15Q8TE58 950 aa14.34□□□□□ -0.11
BEST1-204ENST00000524926 ALPK1Q96QP1 1244 aa14.34□□□□□ -0.11
BEST1-204ENST00000524926 NIPSNAP1Q9BPW8 284 aa14.34□□□□□ -0.11
BEST1-204ENST00000524926 WFDC6Q9BQY6 131 aa14.34□□□□□ -0.11
BEST1-204ENST00000524926 NPLQ9BXD5 320 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms